RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 NSMCE3Q96MG7 304 aa16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 WDR92Q96MX6 357 aa16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 RBM15Q96T37 977 aaKnown RBP eCLIP16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 SNRNP25Q9BV90 132 aaKnown RBP16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 SEMA4CQ9C0C4 833 aa16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 DHX35Q9H5Z1 703 aaKnown RBP16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ANO10Q9NW15 660 aa16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 GPR34Q9UPC5 381 aa16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 TMEM202A6NGA9 273 aa16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ARHGAP42A6NI28 874 aa16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 TMCO5BA8MYB1 307 aa16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 D6RAR5 112 aa16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 K7ENP7 123 aa16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ATP1A3P13637 1013 aa16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 GM2AP17900 193 aa16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 CDK11BP21127 795 aaKnown RBP16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 PSMA2P25787 234 aa16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 SERPINA4P29622 427 aa16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 MLLT3P42568 568 aaPredicted RBP16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 CCL7P80098 99 aa16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 CLN3Q13286 438 aa16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 STX1AQ16623 288 aa16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 PLEKHA7Q6IQ23 1121 aa16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 INO80CQ6PI98 192 aaPredicted RBP16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 SASS6Q6UVJ0 657 aa16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 RFX8Q6ZV50 586 aa16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ZNF605Q86T29 641 aa16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 OR1E3Q8WZA6 343 aa16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 CCDC97Q96F63 343 aaPredicted RBP16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 GFM1Q96RP9 751 aaKnown RBP16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 KCTD15Q96SI1 283 aaPredicted RBP16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 FOXP3Q9BZS1 431 aa16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ATP13A3Q9H7F0 1226 aa16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 EPB41L5Q9HCM4 733 aa16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 FGF22Q9HCT0 170 aa16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 PARVAQ9NVD7 372 aa16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 DONSONQ9NYP3 566 aa16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 PCSK1NQ9UHG2 260 aa16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 DGKBQ9Y6T7 804 aa16.79■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ZNF462Q96JM2 2506 aa16.78■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 CFAP69A5D8W1 941 aa16.78■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 EIF3CLB5ME19 914 aaKnown RBP16.78■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 RECQL5O94762 991 aaPredicted RBP16.78■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 TNFP01375 233 aa16.78■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 RPLP0P05388 317 aaKnown RBP16.78■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 DESP17661 470 aa16.78■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ERCC2P18074 760 aa16.78■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 KIAA1024LP59773 190 aa16.78■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 LY6DQ14210 128 aa16.78■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ERMARDQ5T6L9 678 aa16.78■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 LIPIQ6XZB0 460 aa16.78■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 SFTPA2Q8IWL1 248 aa16.78■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 TP53INP2Q8IXH6 220 aa16.78■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 GPR156Q8NFN8 814 aa16.78■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 OR56A4Q8NGH8 313 aa16.78■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ATL2Q8NHH9 583 aa16.78■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 EIF3CQ99613 913 aaKnown RBP16.78■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 CINPQ9BW66 212 aaPredicted RBP16.78■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 TRIM7Q9C029 511 aa16.78■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 MRPL40Q9NQ50 206 aaKnown RBP16.78■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 TMEM191CA6NGB0 347 aa16.77■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 DFFAO00273 331 aa16.77■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 TRAFD1O14545 582 aaPredicted RBP16.77■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 PLD2O14939 933 aa16.77■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 TEX33O43247 280 aa16.77■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ELFN1P0C7U0 828 aa16.77■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 CCDC172P0C7W6 258 aa16.77■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 HGFP14210 728 aa16.77■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 TNFAIP3P21580 790 aa16.77■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 BCL2L1Q07817 233 aa16.77■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 KIAA1614Q5VZ46 1190 aa16.77■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 DPPA4Q7L190 304 aa16.77■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 RAB11FIP2Q7L804 512 aa16.77■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 PELI3Q8N2H9 469 aa16.77■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 LGR4Q9BXB1 951 aa16.77■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 LRRN3Q9H3W5 708 aa16.77■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 SP110Q9HB58 689 aa16.77■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 LRRC53A6NM62 1247 aa16.76■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 A8MX80 341 aa16.76■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 DAPK3O43293 454 aa16.76■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 MIPP30301 263 aa16.76■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 SLC5A2P31639 672 aa16.76■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 CCKBRP32239 447 aa16.76■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 UGT1A5P35504 534 aa16.76■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 TRIM23P36406 574 aa16.76■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 INHBCP55103 352 aa16.76■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 IL10RBQ08334 325 aa16.76■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 NSUN2Q08J23 767 aaKnown RBP eCLIP16.76■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 EIF3IQ13347 325 aaKnown RBP16.76■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 RFTN1Q14699 578 aaPredicted RBP16.76■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 PPP6R3Q5H9R7 873 aaPredicted RBP16.76■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 OGFOD3Q6PK18 319 aa16.76■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 CCDC81Q6ZN84 652 aa16.76■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 FBXO39Q8N4B4 442 aa16.76■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 OR6C4Q8NGE1 309 aa16.76■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 CCL4L1Q8NHW4 92 aa16.76■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 TMEM168Q9H0V1 697 aa16.76■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 APPL1Q9UKG1 709 aa16.76■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 MYO6Q9UM54 1294 aa16.76■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 PCDHGA7Q9Y5G6 932 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms