RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 KCNK5O95279 499 aa20.02■□□□□ 0.8
TSPAN3-210ENST00000561277 PDHA1P08559 390 aa20.02■□□□□ 0.8
TSPAN3-210ENST00000561277 ELFN1P0C7U0 828 aa20.02■□□□□ 0.8
TSPAN3-210ENST00000561277 ZNF883P0CG24 379 aa20.02■□□□□ 0.8
TSPAN3-210ENST00000561277 PYGMP11217 842 aa20.02■□□□□ 0.8
TSPAN3-210ENST00000561277 CETN2P41208 172 aa20.02■□□□□ 0.8
TSPAN3-210ENST00000561277 RALGDSQ12967 914 aa20.02■□□□□ 0.8
TSPAN3-210ENST00000561277 IHHQ14623 411 aa20.02■□□□□ 0.8
TSPAN3-210ENST00000561277 PRKD1Q15139 912 aaPredicted RBP20.02■□□□□ 0.8
TSPAN3-210ENST00000561277 KYAT3Q6YP21 454 aaKnown RBP20.02■□□□□ 0.8
TSPAN3-210ENST00000561277 NAXDQ8IW45 347 aa20.02■□□□□ 0.8
TSPAN3-210ENST00000561277 RNF10Q8N5U6 811 aaKnown RBP20.02■□□□□ 0.8
TSPAN3-210ENST00000561277 DENND6BQ8NEG7 585 aa20.02■□□□□ 0.8
TSPAN3-210ENST00000561277 SETD7Q8WTS6 366 aaKnown RBP20.02■□□□□ 0.8
TSPAN3-210ENST00000561277 SLC32A1Q9H598 525 aa20.02■□□□□ 0.8
TSPAN3-210ENST00000561277 HS3ST3A1Q9Y663 406 aa20.02■□□□□ 0.8
TSPAN3-210ENST00000561277 A0A1B0GTQ1 180 aa20.01■□□□□ 0.79
TSPAN3-210ENST00000561277 MIF4GDA9UHW6 222 aaKnown RBP20.01■□□□□ 0.79
TSPAN3-210ENST00000561277 DFNA5O60443 496 aa20.01■□□□□ 0.79
TSPAN3-210ENST00000561277 CTPS1P17812 591 aa20.01■□□□□ 0.79
TSPAN3-210ENST00000561277 IGFALSP35858 605 aa20.01■□□□□ 0.79
TSPAN3-210ENST00000561277 CD86P42081 329 aa20.01■□□□□ 0.79
TSPAN3-210ENST00000561277 PTPRRQ15256 657 aa20.01■□□□□ 0.79
TSPAN3-210ENST00000561277 PIP4P1Q86T03 277 aa20.01■□□□□ 0.79
TSPAN3-210ENST00000561277 SLC22A18ASQ8N1D0 253 aa20.01■□□□□ 0.79
TSPAN3-210ENST00000561277 SPOCK2Q92563 424 aa20.01■□□□□ 0.79
TSPAN3-210ENST00000561277 CENPTQ96BT3 561 aa20.01■□□□□ 0.79
TSPAN3-210ENST00000561277 TDRD1Q9BXT4 1180 aaKnown RBP20.01■□□□□ 0.79
TSPAN3-210ENST00000561277 MBNL1Q9NR56 388 aaKnown RBP20.01■□□□□ 0.79
TSPAN3-210ENST00000561277 PHTF1Q9UMS5 762 aa20.01■□□□□ 0.79
TSPAN3-210ENST00000561277 CHKBQ9Y259 395 aa20.01■□□□□ 0.79
TSPAN3-210ENST00000561277 LRRK1Q38SD2 2015 aa20.01■□□□□ 0.79
TSPAN3-210ENST00000561277 CNOT1A5YKK6 2376 aaKnown RBP20.01■□□□□ 0.79
TSPAN3-210ENST00000561277 APOC4-APOC2K7ER74 178 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 DDX3YO15523 660 aaKnown RBP20■□□□□ 0.79
TSPAN3-210ENST00000561277 APOC2P02655 101 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 PTMAP06454 111 aaKnown RBP20■□□□□ 0.79
TSPAN3-210ENST00000561277 ALPIP09923 528 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 CSRP1P21291 193 aaKnown RBP20■□□□□ 0.79
TSPAN3-210ENST00000561277 CA4P22748 312 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 CES1P23141 567 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 ARRB1P49407 418 aaPredicted RBP20■□□□□ 0.79
TSPAN3-210ENST00000561277 EPHB1P54762 984 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 IRF4Q15306 451 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 SHBQ15464 509 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 DENND2CQ68D51 928 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 USP45Q70EL2 814 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 ERMP1Q7Z2K6 904 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 GATAD2AQ86YP4 633 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 TP53I13Q8NBR0 393 aaPredicted RBP20■□□□□ 0.79
TSPAN3-210ENST00000561277 SPTBN2O15020 2390 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 NPIPB15A6NHN6 443 aaPredicted RBP20■□□□□ 0.79
TSPAN3-210ENST00000561277 FZD6O60353 706 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 MMP2P08253 660 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 NFKBIAP25963 317 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 PTPN3P26045 913 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 VIPR1P32241 457 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 PTPN7P35236 360 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 RABIFP47224 123 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 LRRC14Q15048 493 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 WSCD2Q2TBF2 565 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 LIPIQ6XZB0 460 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 OXR1Q8N573 874 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 LPCAT1Q8NF37 534 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 FAM174AQ8TBP5 190 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 PIH1D2Q8WWB5 315 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 QKIQ96PU8 341 aaKnown RBP eCLIP20■□□□□ 0.793e-6■□□□□ 10.1
TSPAN3-210ENST00000561277 SMIM14Q96QK8 99 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 RBM15Q96T37 977 aaKnown RBP eCLIP20■□□□□ 0.79
TSPAN3-210ENST00000561277 FAM118BQ9BPY3 351 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 ERVMER34-1Q9H9K5 563 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 BTBD3Q9Y2F9 522 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 EFR3BQ9Y2G0 817 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 PCDHGB2Q9Y5G2 931 aa20■□□□□ 0.79
TSPAN3-210ENST00000561277 CACNA1AO00555 2505 aa19.99■□□□□ 0.79
TSPAN3-210ENST00000561277 H7C0C1 242 aa19.99■□□□□ 0.79
TSPAN3-210ENST00000561277 RECQL5O94762 991 aaPredicted RBP19.99■□□□□ 0.79
TSPAN3-210ENST00000561277 PCCBP05166 539 aa19.99■□□□□ 0.79
TSPAN3-210ENST00000561277 LHCGRP22888 699 aa19.99■□□□□ 0.79
TSPAN3-210ENST00000561277 ATP5OP48047 213 aa19.99■□□□□ 0.79
TSPAN3-210ENST00000561277 SKOR1P84550 965 aa19.99■□□□□ 0.79
TSPAN3-210ENST00000561277 OTUD4Q01804 1114 aaKnown RBP19.99■□□□□ 0.79
TSPAN3-210ENST00000561277 PDE1CQ14123 709 aaPredicted RBP19.99■□□□□ 0.79
TSPAN3-210ENST00000561277 SUZ12Q15022 739 aaKnown RBP19.99■□□□□ 0.79
TSPAN3-210ENST00000561277 ACOX1Q15067 660 aa19.99■□□□□ 0.79
TSPAN3-210ENST00000561277 NOMO1Q15155 1222 aa19.99■□□□□ 0.79
TSPAN3-210ENST00000561277 CNGA3Q16281 694 aa19.99■□□□□ 0.79
TSPAN3-210ENST00000561277 TEX44Q53QW1 395 aa19.99■□□□□ 0.79
TSPAN3-210ENST00000561277 ACTL9Q8TC94 416 aa19.99■□□□□ 0.79
TSPAN3-210ENST00000561277 SCRN2Q96FV2 425 aa19.99■□□□□ 0.79
TSPAN3-210ENST00000561277 HES6Q96HZ4 224 aa19.99■□□□□ 0.79
TSPAN3-210ENST00000561277 C10orf88Q9H8K7 445 aa19.99■□□□□ 0.79
TSPAN3-210ENST00000561277 PCDH9Q9HC56 1237 aa19.99■□□□□ 0.79
TSPAN3-210ENST00000561277 A0A0U1RQS6 177 aa19.98■□□□□ 0.79
TSPAN3-210ENST00000561277 FLRT2O43155 660 aa19.98■□□□□ 0.79
TSPAN3-210ENST00000561277 PCDHGA12O60330 932 aa19.98■□□□□ 0.79
TSPAN3-210ENST00000561277 SDC3O75056 442 aa19.98■□□□□ 0.79
TSPAN3-210ENST00000561277 TJP3O95049 919 aa19.98■□□□□ 0.79
TSPAN3-210ENST00000561277 ITGAVP06756 1048 aa19.98■□□□□ 0.79
TSPAN3-210ENST00000561277 CYP2A6P11509 494 aaPredicted RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms