RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 MMP9P14780 707 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 CPA3P15088 417 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 AREGP15514 252 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 PRLRP16471 622 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 ZNF18P17022 549 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 TRIM21P19474 475 aaKnown RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 CD72P21854 359 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 SLC6A2P23975 617 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 ADRA1DP25100 572 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 CCND2P30279 289 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 SFNP31947 248 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 CDAP32320 146 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 TRHRP34981 398 aaPredicted RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 ADRA1BP35368 520 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 SLC16A2P36021 539 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 PRCPP42785 496 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 CRKLP46109 303 aaKnown RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 MTIF2P46199 727 aaKnown RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 MTNR1AP48039 350 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 ATP5OP48047 213 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 BLKP51451 505 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 IRAK1P51617 712 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 JAK3P52333 1124 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 TIAL1Q01085 375 aaKnown RBP eCLIP2.07□□□□□ -2.08
RTF1-207ENST00000561076 CYP4A11Q02928 519 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 TAP2Q03519 686 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 RBPJQ06330 500 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 GRSF1Q12849 480 aaKnown RBP eCLIP2.07□□□□□ -2.08
RTF1-207ENST00000561076 HSPB3Q12988 150 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 SCGB2A2Q13296 93 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 PPIGQ13427 754 aaKnown RBP eCLIP2.07□□□□□ -2.08
RTF1-207ENST00000561076 RAPSNQ13702 412 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 DPYSQ14117 519 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 ADGRE1Q14246 886 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 GAMTQ14353 236 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 RCN1Q15293 331 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 CNGA3Q16281 694 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 CARTPTQ16568 116 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 BMT2Q1RMZ1 405 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 ERCC6LQ2NKX8 1250 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 COL28A1Q2UY09 1125 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 PCGF3Q3KNV8 242 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 TBC1D25Q3MII6 688 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 ZIK1Q3SY52 487 aaPredicted RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 SPDYE7PQ495Y7 208 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 NRN1LQ496H8 165 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 KCTD21Q4G0X4 260 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 CBWD6Q4V339 395 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 GLE1Q53GS7 698 aaKnown RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 ZNF789Q5FWF6 425 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 NOMO2Q5JPE7 1267 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 LRRC73Q5JTD7 316 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 CBWD3Q5JTY5 395 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 CFAP157Q5JU67 520 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 TEDDM1Q5T9Z0 273 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 RIPPLY2Q5TAB7 128 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 AGBL4Q5VU57 503 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 CES5AQ6NT32 575 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 SLC25A24Q6NUK1 477 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 AADACL2Q6P093 401 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 ACSM6Q6P461 480 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 GJB7Q6PEY0 223 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 LYPD4Q6UWN0 246 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 SLC39A5Q6ZMH5 540 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 MOB3CQ70IA8 216 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 MARK2Q7KZI7 788 aaKnown RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 PARS2Q7L3T8 475 aaKnown RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 TAS2R42Q7RTR8 314 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 PRSS45Q7RTY3 260 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 ARMC9Q7Z3E5 817 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 NANOGNBQ7Z5D8 188 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 FRMD5Q7Z6J6 570 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 DSG4Q86SJ6 1040 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 CAND1Q86VP6 1230 aaKnown RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 CIR1Q86X95 450 aaPredicted RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 XYLT1Q86Y38 959 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 TDRPQ86YL5 185 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 RFX6Q8HWS3 928 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 TMPRSS6Q8IU80 811 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 FOXP4Q8IVH2 680 aaPredicted RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 CCDC83Q8IWF9 413 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 CNTN4Q8IWV2 1026 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 REXO1L1PQ8IX06 675 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 MCEMP1Q8IX19 187 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 FAM217AQ8IXS0 508 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 SCYL3Q8IZE3 742 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 MAML2Q8IZL2 1156 aaPredicted RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.07□□□□□ -2.08
RTF1-207ENST00000561076 POU5F2Q8N7G0 328 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 BEND7Q8N7W2 519 aaPredicted RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 MIGA1Q8NAN2 632 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 KDM1BQ8NB78 822 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 KYQ8NBH2 561 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 B3GALNT2Q8NCR0 500 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 RBM15BQ8NDT2 890 aaKnown RBP2.07□□□□□ -2.08
RTF1-207ENST00000561076 SUPT20HQ8NEM7 779 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 OR8K5Q8NH50 307 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 XAGE5Q8WWM1 108 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 CPA5Q8WXQ8 436 aa2.07□□□□□ -2.08
RTF1-207ENST00000561076 ROBO4Q8WZ75 1007 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms