RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 SUV39H2Q9H5I1 410 aa7.08□□□□□ -1.28
CTDSPL2-210ENST00000560834 DKK3Q9UBP4 350 aa7.08□□□□□ -1.28
CTDSPL2-210ENST00000560834 EBF1Q9UH73 591 aa7.08□□□□□ -1.28
CTDSPL2-210ENST00000560834 ASIC3Q9UHC3 531 aa7.08□□□□□ -1.28
CTDSPL2-210ENST00000560834 CHKBQ9Y259 395 aa7.08□□□□□ -1.28
CTDSPL2-210ENST00000560834 ITM2BQ9Y287 266 aa7.08□□□□□ -1.28
CTDSPL2-210ENST00000560834 AAR2Q9Y312 384 aaKnown RBP7.08□□□□□ -1.28
CTDSPL2-210ENST00000560834 TTC28Q96AY4 2481 aa7.08□□□□□ -1.28
CTDSPL2-210ENST00000560834 ZNF318Q5VUA4 2279 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 A0A1W2PQ67 120 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 CAPN8A6NHC0 703 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 C16orf96A6NNT2 1141 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 ERI2A8K979 691 aaKnown RBP7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 UPK3BL1B0FP48 263 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 UPK3BL2E5RIL1 263 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 AREL1O15033 823 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 PLRG1O43660 514 aaKnown RBP7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 RNASEH1O60930 286 aaKnown RBP7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 USP12O75317 370 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 ALDH1A2O94788 518 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 SEC31AO94979 1220 aaKnown RBP7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 HEXIM1O94992 359 aaKnown RBP7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 NDST3O95803 873 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 PRKCGP05129 697 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 APRTP07741 180 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 ALPIP09923 528 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 HLA-DPA1P20036 260 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 CA4P22748 312 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 LHCGRP22888 699 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 AVPR2P30518 371 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 HOXA6P31267 233 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 ACTN2P35609 894 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 MMP12P39900 470 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 GRIA1P42261 906 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 TPMTP51580 245 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 NEK3P51956 506 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 ADPRHP54922 357 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 TAS2R38P59533 333 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 RPL26P61254 145 aaKnown RBP7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 CDK18Q07002 472 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 RALGDSQ12967 914 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 SPARCL1Q14515 664 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 PRPSAP1Q14558 356 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 PTPRRQ15256 657 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 SLC1A5Q15758 541 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 TTC31Q49AM3 519 aaPredicted RBP7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 SIRPB2Q5JXA9 342 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 TMEM31Q5JXX7 168 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 ARMC12Q5T9G4 340 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 FAM46CQ5VWP2 391 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 IZUMO3Q5VZ72 239 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 DUPD1Q68J44 220 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 DENND5AQ6IQ26 1287 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 BRAT1Q6PJG6 821 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 RANBP10Q6VN20 620 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 USP30Q70CQ3 517 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 ERN2Q76MJ5 926 aaKnown RBP7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 C1orf210Q8IVY1 113 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 CAMKK1Q8N5S9 505 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 LPCAT1Q8NF37 534 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 HCAR2Q8TDS4 363 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 PDCD6IPQ8WUM4 868 aaKnown RBP7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 SEC14L1Q92503 715 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 NELL1Q92832 810 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 MCCC1Q96RQ3 725 aaPredicted RBP7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 TBL1YQ9BQ87 522 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 APOL2Q9BQE5 337 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 ERP44Q9BS26 406 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 FSD1LQ9BXM9 530 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 DPH5Q9H2P9 285 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 LRRC40Q9H9A6 602 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 GRHL1Q9NZI5 618 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 BCCIPQ9P287 314 aaKnown RBP eCLIP7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 FEZ2Q9UHY8 353 aaPredicted RBP7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 GGT7Q9UJ14 662 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 FZD4Q9ULV1 537 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 SCML1Q9UN30 329 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 RPL26L1Q9UNX3 145 aaKnown RBP7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 PPIL1Q9Y3C6 166 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 SPO11Q9Y5K1 396 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 TP53BP1Q12888 1972 aaPredicted RBP7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 CEP192Q8TEP8 1941 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 NCOR1O75376 2440 aa7.07□□□□□ -1.28
CTDSPL2-210ENST00000560834 PLXNB3Q9ULL4 1909 aa7.06□□□□□ -1.28
CTDSPL2-210ENST00000560834 IGHV1OR15-9A0A0B4J2B8 117 aa7.06□□□□□ -1.28
CTDSPL2-210ENST00000560834 CCDC163A0A0D9SF12 145 aa7.06□□□□□ -1.28
CTDSPL2-210ENST00000560834 A0A0J9YYE9 177 aa7.06□□□□□ -1.28
CTDSPL2-210ENST00000560834 ESYT3A0FGR9 886 aa7.06□□□□□ -1.28
CTDSPL2-210ENST00000560834 GOLGA6CA6NDK9 693 aa7.06□□□□□ -1.28
CTDSPL2-210ENST00000560834 GOLGA6BA6NDN3 693 aa7.06□□□□□ -1.28
CTDSPL2-210ENST00000560834 NPIPB15A6NHN6 443 aaPredicted RBP7.06□□□□□ -1.28
CTDSPL2-210ENST00000560834 EFCAB8A8MWE9 144 aa7.06□□□□□ -1.28
CTDSPL2-210ENST00000560834 AXIN1O15169 862 aa7.06□□□□□ -1.28
CTDSPL2-210ENST00000560834 SLC7A4O43246 635 aa7.06□□□□□ -1.28
CTDSPL2-210ENST00000560834 LAMTOR5O43504 91 aa7.06□□□□□ -1.28
CTDSPL2-210ENST00000560834 AP1G1O43747 822 aa7.06□□□□□ -1.28
CTDSPL2-210ENST00000560834 RNASEH2AO75792 299 aaKnown RBP7.06□□□□□ -1.28
CTDSPL2-210ENST00000560834 AGTP01019 485 aa7.06□□□□□ -1.28
CTDSPL2-210ENST00000560834 EPOP01588 193 aa7.06□□□□□ -1.28
CTDSPL2-210ENST00000560834 TRBC1P01850 177 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms