RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 KBTBD12Q3ZCT8 623 aa12.24□□□□□ -0.45
HERC1-205ENST00000559886 ESRP1Q6NXG1 681 aaKnown RBP12.24□□□□□ -0.45
HERC1-205ENST00000559886 ZNF449Q6P9G9 518 aa12.24□□□□□ -0.45
HERC1-205ENST00000559886 BRAT1Q6PJG6 821 aa12.24□□□□□ -0.45
HERC1-205ENST00000559886 PAF1Q8N7H5 531 aa12.24□□□□□ -0.45
HERC1-205ENST00000559886 TMIEQ8NEW7 156 aa12.24□□□□□ -0.45
HERC1-205ENST00000559886 MDGA1Q8NFP4 955 aa12.24□□□□□ -0.45
HERC1-205ENST00000559886 HCAR2Q8TDS4 363 aa12.24□□□□□ -0.45
HERC1-205ENST00000559886 OR8D1Q8WZ84 308 aa12.24□□□□□ -0.45
HERC1-205ENST00000559886 PEX13Q92968 403 aa12.24□□□□□ -0.45
HERC1-205ENST00000559886 FAM129BQ96TA1 746 aa12.24□□□□□ -0.45
HERC1-205ENST00000559886 PRSS16Q9NQE7 514 aa12.24□□□□□ -0.45
HERC1-205ENST00000559886 THEGQ9P2T0 379 aa12.24□□□□□ -0.45
HERC1-205ENST00000559886 DKK3Q9UBP4 350 aa12.24□□□□□ -0.45
HERC1-205ENST00000559886 RIMKLBQ9ULI2 386 aa12.24□□□□□ -0.45
HERC1-205ENST00000559886 PPM1HQ9ULR3 514 aa12.24□□□□□ -0.45
HERC1-205ENST00000559886 ARL5AQ9Y689 179 aa12.24□□□□□ -0.45
HERC1-205ENST00000559886 SCN8AQ9UQD0 1980 aa12.24□□□□□ -0.45
HERC1-205ENST00000559886 CCDC78A2IDD5 438 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 FAM159BA6NKW6 160 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 CRTAMO95727 393 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 PRNPP04156 253 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 IVLP07476 585 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 TIE1P35590 1138 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 SEC13P55735 322 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 POLR2LP62875 67 aaKnown RBP12.23□□□□□ -0.45
HERC1-205ENST00000559886 PTPRRQ15256 657 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 LONRF1Q17RB8 773 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 KLHL38Q2WGJ6 581 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 ZNF805Q5CZA5 627 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 UNC5BQ8IZJ1 945 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 CERS2Q96G23 380 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 LYSMD1Q96S90 227 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 SRPK1Q96SB4 655 aaKnown RBP12.23□□□□□ -0.45
HERC1-205ENST00000559886 SH3GL2Q99962 352 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 TRABDQ9H4I3 376 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 PPCSQ9HAB8 311 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 SLC2A6Q9UGQ3 507 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 BPTFQ12830 3046 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 RASGRF2O14827 1237 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 AURKAO14965 403 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 ALPIP09923 528 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 CTPS1P17812 591 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 ABL2P42684 1182 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 ACVR1Q04771 509 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 CAMK2GQ13555 558 aaPredicted RBP12.23□□□□□ -0.45
HERC1-205ENST00000559886 EFTUD2Q15029 972 aaKnown RBP eCLIP12.23□□□□□ -0.453e-10■□□□□ 11.3
HERC1-205ENST00000559886 CNGA3Q16281 694 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 TPRG1Q6ZUI0 275 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 GLT6D1Q7Z4J2 308 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 CROCCP2Q86T23 111 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 NDUFAF2Q8N183 169 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 OR13J1Q8NGT2 312 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 EPS8L3Q8TE67 593 aaKnown RBP12.23□□□□□ -0.45
HERC1-205ENST00000559886 FAM3CQ92520 227 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 SCRN2Q96FV2 425 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 MCCC1Q96RQ3 725 aaPredicted RBP12.23□□□□□ -0.45
HERC1-205ENST00000559886 SMYD2Q9NRG4 433 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 VPS18Q9P253 973 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 SARDHQ9UL12 918 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 SORCS3Q9UPU3 1222 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 KCTD3Q9Y597 815 aa12.23□□□□□ -0.45
HERC1-205ENST00000559886 CAPN8A6NHC0 703 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 C19orf67A6NJJ6 358 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 C2orf81A6NN90 581 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 OPA1O60313 960 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 PIAS1O75925 651 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 PAMP19021 973 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 PSMA3P25788 255 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 ARNTP27540 789 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 GCAP28676 217 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 NTSR1P30989 418 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 HNF1BP35680 557 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 ARCN1P48444 511 aaKnown RBP12.22□□□□□ -0.45
HERC1-205ENST00000559886 MRPS21P82921 87 aaKnown RBP12.22□□□□□ -0.45
HERC1-205ENST00000559886 KRT71Q3SY84 523 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 C2orf27AQ580R0 203 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 KIAA0930Q6ICG6 404 aaPredicted RBP12.22□□□□□ -0.45
HERC1-205ENST00000559886 TTC30BQ8N4P2 665 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 STYXQ8WUJ0 223 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 GABRG3Q99928 467 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 SLC24A2Q9UI40 661 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 ZNF711Q9Y462 761 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 TRIOO75962 3097 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 CXorf49A8MYA2 514 aaPredicted RBP12.22□□□□□ -0.45
HERC1-205ENST00000559886 POC1B-GALNT4F8VUJ3 575 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 SYF2O95926 243 aaKnown RBP12.22□□□□□ -0.45
HERC1-205ENST00000559886 ERVK-10P10266 1014 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 LPOP22079 712 aaPredicted RBP12.22□□□□□ -0.45
HERC1-205ENST00000559886 WASP42768 502 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 ZNF140P52738 457 aaPredicted RBP12.22□□□□□ -0.45
HERC1-205ENST00000559886 PDE1BQ01064 536 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 MGAT5Q09328 741 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 CCINQ13939 588 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 MLF2Q15773 248 aaPredicted RBP12.22□□□□□ -0.45
HERC1-205ENST00000559886 CDKN3Q16667 212 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 UGP2Q16851 508 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 SKIDA1Q1XH10 827 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 FBXO43Q4G163 708 aa12.22□□□□□ -0.45
HERC1-205ENST00000559886 PDPK2PQ6A1A2 396 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms