RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 PGAP3Q96FM1 320 aaPredicted RBP10.85□□□□□ -0.67
TRAF3-207ENST00000559734 HMCESQ96FZ2 354 aa10.85□□□□□ -0.67
TRAF3-207ENST00000559734 SLC45A3Q96JT2 553 aa10.85□□□□□ -0.67
TRAF3-207ENST00000559734 GSDMAQ96QA5 445 aa10.85□□□□□ -0.67
TRAF3-207ENST00000559734 HAPLN3Q96S86 360 aa10.85□□□□□ -0.67
TRAF3-207ENST00000559734 DDA1Q9BW61 102 aa10.85□□□□□ -0.67
TRAF3-207ENST00000559734 TTYH3Q9C0H2 523 aa10.85□□□□□ -0.67
TRAF3-207ENST00000559734 PDCL3Q9H2J4 239 aa10.85□□□□□ -0.67
TRAF3-207ENST00000559734 GDPD2Q9HCC8 539 aa10.85□□□□□ -0.67
TRAF3-207ENST00000559734 PCDH12Q9NPG4 1184 aa10.85□□□□□ -0.67
TRAF3-207ENST00000559734 VPS4AQ9UN37 437 aa10.85□□□□□ -0.67
TRAF3-207ENST00000559734 PCDHGC3Q9UN70 934 aa10.85□□□□□ -0.67
TRAF3-207ENST00000559734 CTNND2Q9UQB3 1225 aa10.85□□□□□ -0.67
TRAF3-207ENST00000559734 TEX15Q9BXT5 2789 aa10.85□□□□□ -0.67
TRAF3-207ENST00000559734 CHD5Q8TDI0 1954 aa10.85□□□□□ -0.67
TRAF3-207ENST00000559734 LRP4O75096 1905 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 UNC13CQ8NB66 2214 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 MYO9AB2RTY4 2548 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 CAPN5O15484 640 aaPredicted RBP10.84□□□□□ -0.67
TRAF3-207ENST00000559734 TEX33O43247 280 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 ZW10O43264 779 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 CD44P16070 742 aaKnown RBP10.84□□□□□ -0.67
TRAF3-207ENST00000559734 GNLYP22749 145 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 KELP23276 732 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 FLT3P36888 993 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 CD97P48960 835 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 MAPKAPK2P49137 400 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 LIMK2P53671 638 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 PTK2Q05397 1052 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 CDO1Q16878 200 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 ARTNQ5T4W7 220 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 DCAF12Q5T6F0 453 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 PHLDB2Q86SQ0 1253 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 ZDHHC17Q8IUH5 632 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 CREBRFQ8IUR6 639 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 TRIM59Q8IWR1 403 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 NLGN4XQ8N0W4 816 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 EFCAB3Q8N7B9 438 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 PAF1Q8N7H5 531 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 NLGN4YQ8NFZ3 816 aaPredicted RBP10.84□□□□□ -0.67
TRAF3-207ENST00000559734 NELFBQ8WX92 580 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 STARD8Q92502 1023 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 DHTKD1Q96HY7 919 aaPredicted RBP10.84□□□□□ -0.67
TRAF3-207ENST00000559734 CFAP57Q96MR6 1250 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 CTRCQ99895 268 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 ASPSCR1Q9BZE9 553 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 CARS2Q9HA77 564 aaKnown RBP10.84□□□□□ -0.67
TRAF3-207ENST00000559734 SPATS2LQ9NUQ6 558 aaKnown RBP10.84□□□□□ -0.67
TRAF3-207ENST00000559734 OCIAD1Q9NX40 245 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 TMEM9Q9P0T7 183 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 PPARGC1AQ9UBK2 798 aaKnown RBP10.84□□□□□ -0.67
TRAF3-207ENST00000559734 DKK3Q9UBP4 350 aa10.84□□□□□ -0.67
TRAF3-207ENST00000559734 SPTAN1Q13813 2472 aaKnown RBP10.83□□□□□ -0.68
TRAF3-207ENST00000559734 FLNCQ14315 2725 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 NBPF19A0A087WUL8 3843 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 LOC101059948A0A1B0GTJ6 334 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 A8MU76 341 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 ECEL1O95672 775 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 PNMA6AP0CW24 399 aaPredicted RBP10.83□□□□□ -0.68
TRAF3-207ENST00000559734 RHOQP17081 205 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 TCN2P20062 427 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 CD1CP29017 333 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 CSF2RBP32927 897 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 STX17P56962 302 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 KIAA1024LP59773 190 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 ATP11AP98196 1134 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 TRA2AQ13595 282 aaKnown RBP eCLIP10.83□□□□□ -0.68
TRAF3-207ENST00000559734 UGP2Q16851 508 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 C2CD6Q53TS8 623 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 SNAP47Q5SQN1 464 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 TTI2Q6NXR4 508 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 TRIM65Q6PJ69 517 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 SLC30A9Q6PML9 568 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 SLC47A2Q86VL8 602 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 SSC4DQ8WTU2 575 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 PATE1Q8WXA2 126 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 NT5C3BQ969T7 300 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 RNF31Q96EP0 1072 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 FAM81BQ96LP2 452 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 EFHD1Q9BUP0 239 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 SCAND2PQ9GZW5 306 aaPredicted RBP10.83□□□□□ -0.68
TRAF3-207ENST00000559734 MAGEH1Q9H213 219 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 SRPK3Q9UPE1 567 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 ATP8A1Q9Y2Q0 1164 aa10.83□□□□□ -0.68
TRAF3-207ENST00000559734 NOTCH2Q04721 2471 aa10.82□□□□□ -0.68
TRAF3-207ENST00000559734 NBASA2RRP1 2371 aa10.82□□□□□ -0.68
TRAF3-207ENST00000559734 PRSS38A1L453 326 aa10.82□□□□□ -0.68
TRAF3-207ENST00000559734 ZSCAN5CA6NGD5 496 aaPredicted RBP10.82□□□□□ -0.68
TRAF3-207ENST00000559734 K7EM74 188 aa10.82□□□□□ -0.68
TRAF3-207ENST00000559734 KDELR3O43731 214 aa10.82□□□□□ -0.68
TRAF3-207ENST00000559734 RECQL5O94762 991 aaPredicted RBP10.82□□□□□ -0.68
TRAF3-207ENST00000559734 GNA14O95837 355 aa10.82□□□□□ -0.68
TRAF3-207ENST00000559734 THRAP10827 490 aa10.82□□□□□ -0.68
TRAF3-207ENST00000559734 SLC9A1P19634 815 aa10.82□□□□□ -0.68
TRAF3-207ENST00000559734 AK4P27144 223 aaPredicted RBP10.82□□□□□ -0.68
TRAF3-207ENST00000559734 MAP4P27816 1152 aaKnown RBP10.82□□□□□ -0.68
TRAF3-207ENST00000559734 NOP2P46087 812 aaKnown RBP10.82□□□□□ -0.68
TRAF3-207ENST00000559734 GNPDA1P46926 289 aa10.82□□□□□ -0.68
TRAF3-207ENST00000559734 SUOXP51687 545 aa10.82□□□□□ -0.68
TRAF3-207ENST00000559734 COPB1P53618 953 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms