RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 MACC1Q6ZN28 852 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 USP45Q70EL2 814 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 DPPA4Q7L190 304 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 KANSL1Q7Z3B3 1105 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 RD3Q7Z3Z2 195 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 GAS2L3Q86XJ1 694 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 CCDC50Q8IVM0 306 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 CCDC13Q8IYE1 715 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 PHACTR4Q8IZ21 702 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 RBFAQ8N0V3 343 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 NDUFAF2Q8N183 169 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 GALNT15Q8N3T1 639 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 SLC25A45Q8N413 288 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 ZNF548Q8NEK5 533 aaPredicted RBP8.23□□□□□ -1.09
SNX1-207ENST00000559401 OR4C6Q8NH72 309 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 BTN2A2Q8WVV5 523 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 FAF2Q96CS3 445 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 HDAC11Q96DB2 347 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 IFT43Q96FT9 208 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 NSMCE3Q96MG7 304 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 PANX2Q96RD6 677 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 LGMNQ99538 433 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 SLC13A1Q9BZW2 595 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 GOLPH3Q9H4A6 298 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 GOLGA6AQ9NYA3 693 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 DTLQ9NZJ0 730 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 SEPT10Q9P0V9 454 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 B4GALT6Q9UBX8 382 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 DOLKQ9UPQ8 538 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 WASF3Q9UPY6 502 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 OR1A2Q9Y585 309 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 PCDHA13Q9Y5I0 950 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 RAI2Q9Y5P3 530 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 CHD8Q9HCK8 2581 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 CEP295Q9C0D2 2601 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 ACACBO00763 2458 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 FAM149AA5PLN7 773 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 GOLGA6L6A8MZA4 724 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 KCNK1O00180 336 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 CACNB4O00305 520 aaPredicted RBP8.22□□□□□ -1.09
SNX1-207ENST00000559401 TRAFD1O14545 582 aaPredicted RBP8.22□□□□□ -1.09
SNX1-207ENST00000559401 TOR1BO14657 336 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 PPP1R12AO14974 1030 aaPredicted RBP8.22□□□□□ -1.09
SNX1-207ENST00000559401 SCAMP1O15126 338 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 AQP9O43315 295 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 HTRA2O43464 458 aaPredicted RBP8.22□□□□□ -1.09
SNX1-207ENST00000559401 PSTPIP1O43586 416 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 NDUFA10O95299 355 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 PGLSO95336 258 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 JCHAINP01591 159 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 HLA-DQB2P05538 268 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 PROS1P07225 676 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 ALPIP09923 528 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 CTSEP14091 401 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 ZFXP17010 805 aaPredicted RBP8.22□□□□□ -1.09
SNX1-207ENST00000559401 HNF1BP35680 557 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 ACADVLP49748 655 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 PPARDQ03181 441 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 SLC10A2Q12908 348 aaPredicted RBP8.22□□□□□ -1.09
SNX1-207ENST00000559401 EIF2B5Q13144 721 aaKnown RBP8.22□□□□□ -1.09
SNX1-207ENST00000559401 ZNF211Q13398 564 aaPredicted RBP8.22□□□□□ -1.09
SNX1-207ENST00000559401 MTM1Q13496 603 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 C1orf61Q13536 156 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 CNGA3Q16281 694 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 DEFB133Q30KQ1 61 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 PRRT3Q5FWE3 981 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 RALGPS1Q5JS13 557 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 LRRC38Q5VT99 294 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 KAZNQ674X7 775 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 ENPP7Q6UWV6 458 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 MFSD7Q6UXD7 560 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 DAAM2Q86T65 1068 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 KIAA1328Q86T90 577 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 MARCH9Q86YJ5 346 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 TMTC1Q8IUR5 882 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 HID1Q8IV36 788 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 TEX26Q8N6G2 289 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 PLD5Q8N7P1 536 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 SPC24Q8NBT2 197 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 PLA2G15Q8NCC3 412 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 LPCAT1Q8NF37 534 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 ATL2Q8NHH9 583 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 ZCCHC14Q8WYQ9 949 aaKnown RBP8.22□□□□□ -1.09
SNX1-207ENST00000559401 MAML1Q92585 1016 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 NUS1Q96E22 293 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 WDR92Q96MX6 357 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 TSGA13Q96PP4 275 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 IL12RB2Q99665 862 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 APOOQ9BUR5 198 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 CEP41Q9BYV8 373 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 TCEAL2Q9H3H9 227 aaPredicted RBP8.22□□□□□ -1.09
SNX1-207ENST00000559401 SUDS3Q9H7L9 328 aaPredicted RBP8.22□□□□□ -1.09
SNX1-207ENST00000559401 GPR27Q9NS67 375 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 EVA1BQ9NVM1 165 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 NLGN3Q9NZ94 848 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 SPASTQ9UBP0 616 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 KLQ9UEF7 1012 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 MOSPD1Q9UJG1 213 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 PHTF1Q9UMS5 762 aa8.22□□□□□ -1.09
SNX1-207ENST00000559401 CHKBQ9Y259 395 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms