RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 ZNF177Q13360 481 aaPredicted RBP7.52□□□□□ -1.21
SPG11-213ENST00000558988 AUHQ13825 339 aaKnown RBP7.52□□□□□ -1.21
SPG11-213ENST00000558988 KCNJ12Q14500 433 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 DRAP1Q14919 205 aaPredicted RBP7.52□□□□□ -1.21
SPG11-213ENST00000558988 KCNT1Q5JUK3 1230 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 C9orf64Q5T6V5 341 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 FAM102AQ5T9C2 384 aaPredicted RBP7.52□□□□□ -1.21
SPG11-213ENST00000558988 TBC1D3GQ6DHY5 549 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 TBC1D3CQ6IPX1 549 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 FBXL22Q6P050 247 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 IL27RAQ6UWB1 636 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 OLFML1Q6UWY5 402 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.52□□□□□ -1.21
SPG11-213ENST00000558988 TFAP2DQ7Z6R9 452 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 MARCH9Q86YJ5 346 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 GATAD2AQ86YP4 633 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 TBC1D3Q8IZP1 549 aaPredicted RBP7.52□□□□□ -1.21
SPG11-213ENST00000558988 WDTC1Q8N5D0 677 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 FBF1Q8TES7 1133 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 IGSF8Q969P0 613 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 AZIN2Q96A70 460 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 LMLNQ96KR4 655 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 SLC2A13Q96QE2 648 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 MYOCQ99972 504 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 TUBGCP2Q9BSJ2 902 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 ACE2Q9BYF1 805 aaPredicted RBP7.52□□□□□ -1.21
SPG11-213ENST00000558988 NDST4Q9H3R1 872 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 SGK2Q9HBY8 427 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 SLC25A13Q9UJS0 675 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 APOBEC2Q9Y235 224 aaKnown RBP7.52□□□□□ -1.21
SPG11-213ENST00000558988 ANKRD6Q9Y2G4 727 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 HS3ST4Q9Y661 456 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 CHD8Q9HCK8 2581 aa7.52□□□□□ -1.21
SPG11-213ENST00000558988 PLXNA2O75051 1894 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 KNL1Q8NG31 2342 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 EPG5Q9HCE0 2579 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 A0A1B0GVM2 712 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 GTPBP10A4D1E9 387 aaKnown RBP7.51□□□□□ -1.21
SPG11-213ENST00000558988 SNAP91O60641 907 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 RTN2O75298 545 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 ENDOD1O94919 500 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 ADCY5O95622 1261 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 IGLV3-25P01717 112 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 IGHV4-34P06331 123 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 SRPRAP08240 638 aaKnown RBP7.51□□□□□ -1.21
SPG11-213ENST00000558988 RPL34P49207 117 aaKnown RBP7.51□□□□□ -1.21
SPG11-213ENST00000558988 CCT8P50990 548 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 SNX16P57768 344 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 PPP2CBP62714 309 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 PPP2CAP67775 309 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 SLC6A3Q01959 620 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 DEUP1Q05D60 604 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 SLC14A1Q13336 389 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 HNRNPDQ14103 355 aaKnown RBP7.51□□□□□ -1.21
SPG11-213ENST00000558988 MEA1Q16626 185 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 NAA35Q5VZE5 725 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 PAQR3Q6TCH7 311 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 LINGO4Q6UY18 593 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 USP30Q70CQ3 517 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 C14orf80Q86SX3 495 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 PALM2Q8IXS6 379 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 AADATQ8N5Z0 425 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 TMEM35BQ8NCS4 154 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 OR52K2Q8NGK3 314 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 CPA5Q8WXQ8 436 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 OR8D1Q8WZ84 308 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 KLK6Q92876 244 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 PTPRN2Q92932 1015 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 SERAC1Q96JX3 654 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 CCDC74BQ96LY2 380 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 JMJD8Q96S16 334 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 TBCBQ99426 244 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 PRMT1Q99873 361 aaKnown RBP7.51□□□□□ -1.21
SPG11-213ENST00000558988 SPON2Q9BUD6 331 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 TKTL2Q9H0I9 626 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 SAMSN1Q9NSI8 373 aaKnown RBP7.51□□□□□ -1.21
SPG11-213ENST00000558988 PIGVQ9NUD9 493 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.51□□□□□ -1.21
SPG11-213ENST00000558988 MPP6Q9NZW5 540 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 STAP1Q9ULZ2 295 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 WASF3Q9UPY6 502 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 MSRB2Q9Y3D2 182 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 NFE2L3Q9Y4A8 694 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 NEUROG3Q9Y4Z2 214 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 NYNRINQ9P2P1 1898 aaKnown RBP7.51□□□□□ -1.21
SPG11-213ENST00000558988 ITIH6Q6UXX5 1313 aa7.51□□□□□ -1.21
SPG11-213ENST00000558988 A0A1W2PPC4 97 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 TARSL2A2RTX5 802 aaKnown RBP7.5□□□□□ -1.21
SPG11-213ENST00000558988 FAM149AA5PLN7 773 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 K7ERQ8 282 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 CBX4O00257 560 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 KPNA3O00505 521 aaPredicted RBP7.5□□□□□ -1.21
SPG11-213ENST00000558988 WNT9AO14904 365 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 FLRT2O43155 660 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 SRGAP2O75044 1071 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 CNTN5O94779 1100 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 GFPT2O94808 682 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 TRIM16O95361 564 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 RHOCP08134 193 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 MMEP08473 750 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms