RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 EEF1DP3Q658K8 133 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 NCBP2-AS2Q69YL0 99 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 ALKBH2Q6NS38 261 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 PMF1Q6P1K2 205 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 RFWD3Q6PCD5 774 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 ZYG11AQ6WRX3 759 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 BNC2Q6ZN30 1099 aaPredicted RBP5.54□□□□□ -1.52
GABPB1-207ENST00000558335 DCDC5Q6ZRR9 648 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 IKBIPQ70UQ0 350 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 FKBP9P1Q75LS8 142 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 PID1Q7Z2X4 250 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 EFL1Q7Z2Z2 1120 aaKnown RBP5.54□□□□□ -1.52
GABPB1-207ENST00000558335 KCTD20Q7Z5Y7 419 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 C14orf80Q86SX3 495 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 METTL3Q86U44 580 aaKnown RBP5.54□□□□□ -1.52
GABPB1-207ENST00000558335 TMEM135Q86UB9 458 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 ALYREFQ86V81 257 aaKnown RBP5.54□□□□□ -1.52
GABPB1-207ENST00000558335 CAMK1DQ8IU85 385 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 IGDCC3Q8IVU1 814 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 ADGRF2Q8IZF7 708 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 CLYBLQ8N0X4 340 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 PGAM4Q8N0Y7 254 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 AHI1Q8N157 1196 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 PQLC1Q8N2U9 271 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 MARVELD2Q8N4S9 558 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 NATD1Q8N6N6 113 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 PACRGLQ8N7B6 248 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 LINC01465Q8N7H1 131 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 CCNYQ8ND76 341 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 PPHLN1Q8NEY8 458 aaKnown RBP5.54□□□□□ -1.52
GABPB1-207ENST00000558335 URGCPQ8TCY9 931 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 DTX3LQ8TDB6 740 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 RNF139Q8WU17 664 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 FATE1Q969F0 183 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 NT5C3BQ969T7 300 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 TBC1D20Q96BZ9 403 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 HDAC11Q96DB2 347 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 ERLEC1Q96DZ1 483 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 P2RY11Q96G91 374 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 VPS39Q96JC1 886 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 OPALINQ96PE5 141 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 PANX3Q96QZ0 392 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 FDXACB1Q9BRP7 624 aaPredicted RBP5.54□□□□□ -1.52
GABPB1-207ENST00000558335 WDR83Q9BRX9 315 aaKnown RBP5.54□□□□□ -1.52
GABPB1-207ENST00000558335 KATNAL1Q9BW62 490 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 DUSP16Q9BY84 665 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 UPF3AQ9H1J1 476 aaKnown RBP5.54□□□□□ -1.52
GABPB1-207ENST00000558335 ADNPQ9H2P0 1102 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 RHOJQ9H4E5 214 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 CATSPERBQ9H7T0 1116 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 LIN7BQ9HAP6 207 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 FANCEQ9HB96 536 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 ALG13Q9NP73 1137 aaKnown RBP5.54□□□□□ -1.52
GABPB1-207ENST00000558335 POLE3Q9NRF9 147 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 SNX15Q9NRS6 342 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 VPS45Q9NRW7 570 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 SETD4Q9NVD3 440 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 PIH1D1Q9NWS0 290 aaKnown RBP5.54□□□□□ -1.52
GABPB1-207ENST00000558335 OXSMQ9NWU1 459 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 GPRC5DQ9NZD1 345 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 ARMCX1Q9P291 453 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 EVLQ9UI08 416 aaPredicted RBP5.54□□□□□ -1.52
GABPB1-207ENST00000558335 RIMKLBQ9ULI2 386 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 KCNH4Q9UQ05 1017 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 DTNAQ9Y4J8 743 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 PCDHGA11Q9Y5H2 935 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 PTCH2Q9Y6C5 1203 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 TLL2Q9Y6L7 1015 aa5.54□□□□□ -1.52
GABPB1-207ENST00000558335 COL4A5P29400 1685 aa5.53□□□□□ -1.52
GABPB1-207ENST00000558335 A0A096LPK6 155 aa5.53□□□□□ -1.52
GABPB1-207ENST00000558335 C1orf232A0A0U1RR37 186 aa5.53□□□□□ -1.52
GABPB1-207ENST00000558335 C17orf113A0A1B0GUU1 675 aa5.53□□□□□ -1.52
GABPB1-207ENST00000558335 SMIM35A0A1B0GVV1 85 aa5.53□□□□□ -1.52
GABPB1-207ENST00000558335 ILVBLA1L0T0 632 aa5.53□□□□□ -1.52
GABPB1-207ENST00000558335 ZSCAN5BA6NJL1 495 aa5.53□□□□□ -1.52
GABPB1-207ENST00000558335 CXorf49A8MYA2 514 aaPredicted RBP5.53□□□□□ -1.52
GABPB1-207ENST00000558335 FAM25AB3EWG3 89 aa5.53□□□□□ -1.52
GABPB1-207ENST00000558335 FAM25CB3EWG5 89 aa5.53□□□□□ -1.52
GABPB1-207ENST00000558335 FAM25GB3EWG6 89 aa5.53□□□□□ -1.52
GABPB1-207ENST00000558335 H3BRB1 525 aa5.53□□□□□ -1.52
GABPB1-207ENST00000558335 IFRD1O00458 451 aaPredicted RBP5.53□□□□□ -1.52
GABPB1-207ENST00000558335 PIRO00625 290 aa5.53□□□□□ -1.52
GABPB1-207ENST00000558335 PAPSS1O43252 624 aaPredicted RBP5.53□□□□□ -1.52
GABPB1-207ENST00000558335 AQP9O43315 295 aa5.53□□□□□ -1.52
GABPB1-207ENST00000558335 NDUFA2O43678 99 aa5.53□□□□□ -1.52
GABPB1-207ENST00000558335 GATCO43716 136 aaKnown RBP5.53□□□□□ -1.52
GABPB1-207ENST00000558335 AVILO75366 819 aa5.53□□□□□ -1.52
GABPB1-207ENST00000558335 USP2O75604 605 aaPredicted RBP5.53□□□□□ -1.52
GABPB1-207ENST00000558335 METTL18O95568 372 aa5.53□□□□□ -1.52
GABPB1-207ENST00000558335 CLPTM1O96005 669 aa5.53□□□□□ -1.52
GABPB1-207ENST00000558335 ALDOAP04075 364 aaKnown RBP5.53□□□□□ -1.52
GABPB1-207ENST00000558335 IFNA16P05015 189 aa5.53□□□□□ -1.52
GABPB1-207ENST00000558335 EDN1P05305 212 aa5.53□□□□□ -1.52
GABPB1-207ENST00000558335 RETP07949 1114 aa5.53□□□□□ -1.52
GABPB1-207ENST00000558335 PFKMP08237 780 aa5.53□□□□□ -1.52
GABPB1-207ENST00000558335 RBP1P09455 135 aa5.53□□□□□ -1.52
GABPB1-207ENST00000558335 KITP10721 976 aa5.53□□□□□ -1.52
GABPB1-207ENST00000558335 FGFR1P11362 822 aa5.53□□□□□ -1.52
GABPB1-207ENST00000558335 FCGR1AP12314 374 aa5.53□□□□□ -1.52
GABPB1-207ENST00000558335 HOXD8P13378 290 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms