RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.01□□□□□ -0.17
SPG11-210ENST00000558319 SNX6Q9UNH7 406 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 MAPRE3Q9UPY8 281 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 FAM240BA0A1B0GVZ2 78 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 WNT10BO00744 389 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 PIH1D2Q8WWB5 315 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 SENP8Q96LD8 212 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 ZNF518BQ9C0D4 1074 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 IL17RBQ9NRM6 502 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 MARCH2Q9P0N8 246 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 CEP152O94986 1710 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 A0A0X1KG70 313 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 MGRN1O60291 552 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 OR4Q2P0C623 313 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 AZGP1P25311 298 aaKnown RBP14.01□□□□□ -0.17
SPG11-210ENST00000558319 IL2P60568 153 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 STXBP1P61764 594 aaKnown RBP14.01□□□□□ -0.17
SPG11-210ENST00000558319 AP3S1Q92572 193 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 ZDHHC15Q96MV8 337 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 KCNS3Q9BQ31 491 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 SYNPO2Q9UMS6 1093 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 NDRG2Q9UN36 371 aaKnown RBP14.01□□□□□ -0.17
SPG11-210ENST00000558319 AP1S2P56377 157 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 GMFBP60983 142 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 BST1Q10588 318 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 RIPK1Q13546 671 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 CXorf57Q6NSI4 855 aaKnown RBP14.01□□□□□ -0.17
SPG11-210ENST00000558319 C10orf107Q8IVU9 208 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 CLIP4Q8N3C7 705 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 NAT14Q8WUY8 206 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 FBXO21O94952 628 aa14□□□□□ -0.17
SPG11-210ENST00000558319 ATP5BP06576 529 aaKnown RBP14□□□□□ -0.17
SPG11-210ENST00000558319 ELNP15502 786 aa14□□□□□ -0.17
SPG11-210ENST00000558319 CD52P31358 61 aa14□□□□□ -0.17
SPG11-210ENST00000558319 IKBKEQ14164 716 aa14□□□□□ -0.17
SPG11-210ENST00000558319 SATL1Q86VE3 508 aa14□□□□□ -0.17
SPG11-210ENST00000558319 RAB43Q86YS6 212 aa14□□□□□ -0.17
SPG11-210ENST00000558319 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14□□□□□ -0.17
SPG11-210ENST00000558319 Q96MT0 163 aa14□□□□□ -0.17
SPG11-210ENST00000558319 SLC38A2Q96QD8 506 aa14□□□□□ -0.17
SPG11-210ENST00000558319 FBXO44Q9H4M3 255 aa14□□□□□ -0.17
SPG11-210ENST00000558319 PNPOQ9NVS9 261 aa14□□□□□ -0.17
SPG11-210ENST00000558319 GNPTGQ9UJJ9 305 aa14□□□□□ -0.17
SPG11-210ENST00000558319 MDM4O15151 490 aa14□□□□□ -0.17
SPG11-210ENST00000558319 SLITRK3O94933 977 aa14□□□□□ -0.17
SPG11-210ENST00000558319 PCCBP05166 539 aa14□□□□□ -0.17
SPG11-210ENST00000558319 CAPGP40121 348 aa14□□□□□ -0.17
SPG11-210ENST00000558319 RPL38P63173 70 aaKnown RBP14□□□□□ -0.17
SPG11-210ENST00000558319 SMCO1Q147U7 214 aa14□□□□□ -0.17
SPG11-210ENST00000558319 SLC27A1Q6PCB7 646 aa14□□□□□ -0.17
SPG11-210ENST00000558319 DEF8Q6ZN54 512 aa14□□□□□ -0.17
SPG11-210ENST00000558319 C1GALT1C1Q96EU7 318 aa14□□□□□ -0.17
SPG11-210ENST00000558319 CHIAQ9BZP6 476 aa14□□□□□ -0.17
SPG11-210ENST00000558319 BLOC1S4Q9NUP1 217 aa14□□□□□ -0.17
SPG11-210ENST00000558319 MRPS23Q9Y3D9 190 aaKnown RBP14□□□□□ -0.17
SPG11-210ENST00000558319 AVILO75366 819 aa14□□□□□ -0.17
SPG11-210ENST00000558319 ZNF806P0C7X5 589 aa14□□□□□ -0.17
SPG11-210ENST00000558319 CYP2A6P11509 494 aaPredicted RBP14□□□□□ -0.17
SPG11-210ENST00000558319 HNRNPLP14866 589 aaKnown RBP eCLIP14□□□□□ -0.172e-6■□□□□ 8.3
SPG11-210ENST00000558319 FUT4P22083 530 aa14□□□□□ -0.17
SPG11-210ENST00000558319 BTN3A2P78410 334 aa14□□□□□ -0.17
SPG11-210ENST00000558319 SEMG2Q02383 582 aa14□□□□□ -0.17
SPG11-210ENST00000558319 MAPKAPK3Q16644 382 aa14□□□□□ -0.17
SPG11-210ENST00000558319 LRRC73Q5JTD7 316 aa14□□□□□ -0.17
SPG11-210ENST00000558319 OGFOD2Q6N063 350 aa14□□□□□ -0.17
SPG11-210ENST00000558319 BAP1Q92560 729 aa14□□□□□ -0.17
SPG11-210ENST00000558319 C1QTNF1Q9BXJ1 281 aa14□□□□□ -0.17
SPG11-210ENST00000558319 PRRG4Q9BZD6 226 aa14□□□□□ -0.17
SPG11-210ENST00000558319 ABCG4Q9H172 646 aa14□□□□□ -0.17
SPG11-210ENST00000558319 KBTBD4Q9NVX7 518 aa14□□□□□ -0.17
SPG11-210ENST00000558319 GTPBP1O00178 669 aaKnown RBP14□□□□□ -0.17
SPG11-210ENST00000558319 HDCP19113 662 aa14□□□□□ -0.17
SPG11-210ENST00000558319 CXCR3P49682 368 aa14□□□□□ -0.17
SPG11-210ENST00000558319 MAZP56270 477 aaKnown RBP14□□□□□ -0.17
SPG11-210ENST00000558319 USP4Q13107 963 aa14□□□□□ -0.17
SPG11-210ENST00000558319 VANGL1Q8TAA9 524 aaPredicted RBP14□□□□□ -0.17
SPG11-210ENST00000558319 ATL1Q8WXF7 558 aa14□□□□□ -0.17
SPG11-210ENST00000558319 ZNF354BQ96LW1 612 aa14□□□□□ -0.17
SPG11-210ENST00000558319 CIB1Q99828 191 aa14□□□□□ -0.17
SPG11-210ENST00000558319 RAPGEFL1Q9UHV5 662 aa14□□□□□ -0.17
SPG11-210ENST00000558319 RPS6KA6Q9UK32 745 aa14□□□□□ -0.17
SPG11-210ENST00000558319 SH3D21A4FU49 640 aa14□□□□□ -0.17
SPG11-210ENST00000558319 PGRMC2O15173 223 aa14□□□□□ -0.17
SPG11-210ENST00000558319 TLL1O43897 1013 aa14□□□□□ -0.17
SPG11-210ENST00000558319 XYLBO75191 536 aa14□□□□□ -0.17
SPG11-210ENST00000558319 ALDH4A1P30038 563 aa14□□□□□ -0.17
SPG11-210ENST00000558319 AKT2P31751 481 aa14□□□□□ -0.17
SPG11-210ENST00000558319 ARHGDIBP52566 201 aa14□□□□□ -0.17
SPG11-210ENST00000558319 ACSM2AQ08AH3 577 aa14□□□□□ -0.17
SPG11-210ENST00000558319 ACSM2BQ68CK6 577 aa14□□□□□ -0.17
SPG11-210ENST00000558319 GALNTL5Q7Z4T8 443 aa14□□□□□ -0.17
SPG11-210ENST00000558319 PRSS58Q8IYP2 241 aa14□□□□□ -0.17
SPG11-210ENST00000558319 PTGR2Q8N8N7 351 aaPredicted RBP14□□□□□ -0.17
SPG11-210ENST00000558319 KCTD4Q8WVF5 259 aa14□□□□□ -0.17
SPG11-210ENST00000558319 PRR5-ARHGAP8B1AHC4 643 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 LSM8O95777 96 aaKnown RBP13.99□□□□□ -0.17
SPG11-210ENST00000558319 TOP3BO95985 862 aaKnown RBP13.99□□□□□ -0.17
SPG11-210ENST00000558319 VEGFAP15692 232 aaPredicted RBP13.99□□□□□ -0.17
SPG11-210ENST00000558319 ZNF24P17028 368 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 TKTP29401 623 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms