RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 RDM1Q8NG50 284 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 PXYLP1Q8TE99 480 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 RAB2BQ8WUD1 216 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 RPL10LQ96L21 214 aaKnown RBP5.09□□□□□ -1.59
HMG20A-204ENST00000558288 DHRS1Q96LJ7 313 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 SEPHS2Q99611 448 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 DOK1Q99704 481 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 SLC25A23Q9BV35 468 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 TRIM8Q9BZR9 551 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 POMKQ9H5K3 350 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 ZNF385DQ9H6B1 395 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 NANOGQ9H9S0 305 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 ZNF302Q9NR11 478 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 TBC1D13Q9NVG8 400 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 TMEM9Q9P0T7 183 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 ZNF112Q9UJU3 913 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 TSPAN16Q9UKR8 245 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 NOX1Q9Y5S8 564 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 SNX9Q9Y5X1 595 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 COL6A3P12111 3177 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 ADGRA2Q96PE1 1338 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 CCDC162PA2VCL2 907 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 NEMP2A6NFY4 417 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 A6NL46 340 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 OGTO15294 1046 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 DLX3O60479 287 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 SYNCRIPO60506 623 aaKnown RBP5.09□□□□□ -1.59
HMG20A-204ENST00000558288 STBD1O95210 358 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 CXCL8P10145 99 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 SERPINB1P30740 379 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 POLR2IP36954 125 aaKnown RBP5.09□□□□□ -1.59
HMG20A-204ENST00000558288 CASP2P42575 452 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 RPS9P46781 194 aaKnown RBP5.09□□□□□ -1.59
HMG20A-204ENST00000558288 HK2P52789 917 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 TMBIM6P55061 237 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 LSM3P62310 102 aaKnown RBP5.09□□□□□ -1.59
HMG20A-204ENST00000558288 NSUN2Q08J23 767 aaKnown RBP eCLIP5.09□□□□□ -1.59
HMG20A-204ENST00000558288 CAPSQ13938 189 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 LRP8Q14114 963 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 OXA1LQ15070 435 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 CCNYL2Q5T2Q4 361 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 TMTC4Q5T4D3 741 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 SLCO6A1Q86UG4 719 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 PIGZQ86VD9 579 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 PYROXD2Q8N2H3 581 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 PARP8Q8N3A8 854 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 ZCCHC7Q8N3Z6 543 aaKnown RBP5.09□□□□□ -1.59
HMG20A-204ENST00000558288 SFRP1Q8N474 314 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 PACRGLQ8N7B6 248 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 C12orf29Q8N999 325 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 MFSD2AQ8NA29 543 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 SNX19Q92543 992 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 HDAC10Q969S8 669 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 P2RY11Q96G91 374 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 CENPNQ96H22 339 aaPredicted RBP5.09□□□□□ -1.59
HMG20A-204ENST00000558288 CPB2Q96IY4 423 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 CSPG4P5Q96PW8 444 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 ZNF347Q96SE7 839 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 B3GNT5Q9BYG0 378 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 LHPPQ9H008 270 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 XYLT2Q9H1B5 865 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 PIF1Q9H611 641 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 VTA1Q9NP79 307 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 PDLIM7Q9NR12 457 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 TMEM39AQ9NV64 488 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 ERVK-11Q9UQG0 969 aa5.09□□□□□ -1.59
HMG20A-204ENST00000558288 FAM47E-STBD1D6RA91 191 aa5.09□□□□□ -1.6
HMG20A-204ENST00000558288 ANGPT2O15123 496 aa5.09□□□□□ -1.6
HMG20A-204ENST00000558288 MFSD11O43934 449 aa5.09□□□□□ -1.6
HMG20A-204ENST00000558288 MAN1A2O60476 641 aa5.09□□□□□ -1.6
HMG20A-204ENST00000558288 DEAF1O75398 565 aaPredicted RBP5.09□□□□□ -1.6
HMG20A-204ENST00000558288 ALOX5P09917 674 aa5.09□□□□□ -1.6
HMG20A-204ENST00000558288 MTHFD1P11586 935 aaKnown RBP5.09□□□□□ -1.6
HMG20A-204ENST00000558288 FOSL2P15408 326 aa5.09□□□□□ -1.6
HMG20A-204ENST00000558288 TSPAN8P19075 237 aa5.09□□□□□ -1.6
HMG20A-204ENST00000558288 OXTRP30559 389 aa5.09□□□□□ -1.6
HMG20A-204ENST00000558288 GNL1P36915 607 aaPredicted RBP5.09□□□□□ -1.6
HMG20A-204ENST00000558288 NR2C2P49116 596 aa5.09□□□□□ -1.6
HMG20A-204ENST00000558288 PRKAA2P54646 552 aa5.09□□□□□ -1.6
HMG20A-204ENST00000558288 SLC12A2P55011 1212 aa5.09□□□□□ -1.6
HMG20A-204ENST00000558288 MAP2K5Q13163 448 aa5.09□□□□□ -1.6
HMG20A-204ENST00000558288 SLC12A1Q13621 1099 aa5.09□□□□□ -1.6
HMG20A-204ENST00000558288 SURF1Q15526 300 aa5.09□□□□□ -1.6
HMG20A-204ENST00000558288 MAPRE1Q15691 268 aaKnown RBP5.09□□□□□ -1.6
HMG20A-204ENST00000558288 IMPG1Q17R60 797 aa5.09□□□□□ -1.6
HMG20A-204ENST00000558288 FUT11Q495W5 492 aa5.09□□□□□ -1.6
HMG20A-204ENST00000558288 CERCAMQ5T4B2 595 aa5.09□□□□□ -1.6
HMG20A-204ENST00000558288 INTS11Q5TA45 600 aaKnown RBP5.09□□□□□ -1.6
HMG20A-204ENST00000558288 FAM219BQ5XKK7 198 aa5.09□□□□□ -1.6
HMG20A-204ENST00000558288 NCBP2-AS2Q69YL0 99 aa5.09□□□□□ -1.6
HMG20A-204ENST00000558288 IQSEC1Q6DN90 963 aa5.09□□□□□ -1.6
HMG20A-204ENST00000558288 ADCK1Q86TW2 530 aa5.09□□□□□ -1.6
HMG20A-204ENST00000558288 FAM35AQ86V20 835 aa5.09□□□□□ -1.6
HMG20A-204ENST00000558288 CMTR2Q8IYT2 770 aaKnown RBP5.09□□□□□ -1.6
HMG20A-204ENST00000558288 LSMEM2Q8N112 164 aa5.09□□□□□ -1.6
HMG20A-204ENST00000558288 CLEC4FQ8N1N0 589 aa5.09□□□□□ -1.6
HMG20A-204ENST00000558288 KDM1BQ8NB78 822 aa5.09□□□□□ -1.6
HMG20A-204ENST00000558288 RNF149Q8NC42 400 aa5.09□□□□□ -1.6
HMG20A-204ENST00000558288 PDPRQ8NCN5 879 aa5.09□□□□□ -1.6
HMG20A-204ENST00000558288 RDH11Q8TC12 318 aa5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms