RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 RPLP0P6Q8NHW5 317 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 GRIN3AQ8TCU5 1115 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 STYXQ8WUJ0 223 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 PIH1D2Q8WWB5 315 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 CDKL2Q92772 493 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 KLHL32Q96NJ5 620 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 KIFC1Q9BW19 673 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 PABPC3Q9H361 631 aaKnown RBP12.47□□□□□ -0.41
TPM1-209ENST00000558072 MFSD1Q9H3U5 465 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 SOX13Q9UN79 622 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 TEX264Q9Y6I9 313 aa12.47□□□□□ -0.41
TPM1-209ENST00000558072 RGSL1A5PLK6 1076 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 CAPN8A6NHC0 703 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 C16orf96A6NNT2 1141 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 UPK3BL1B0FP48 263 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 UPK3BL2E5RIL1 263 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 H0Y858 1186 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 PSMD11O00231 422 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 PFDN6O15212 129 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 DCXO43602 365 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 PI15O43692 258 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 USP12O75317 370 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 PIGNO95427 931 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 PRLP01236 227 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 IVLP07476 585 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 DCNP07585 359 aaKnown RBP12.46□□□□□ -0.41
TPM1-209ENST00000558072 ABHD2P08910 425 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 ATXN1LP0C7T5 689 aaKnown RBP12.46□□□□□ -0.41
TPM1-209ENST00000558072 ACADMP11310 421 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 H2AFXP16104 143 aaPredicted RBP12.46□□□□□ -0.41
TPM1-209ENST00000558072 COL9A1P20849 921 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 LPOP22079 712 aaPredicted RBP12.46□□□□□ -0.41
TPM1-209ENST00000558072 MGAT1P26572 445 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 STX2P32856 288 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 EIF3BP55884 814 aaKnown RBP12.46□□□□□ -0.41
TPM1-209ENST00000558072 SATB1Q01826 763 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 GAS6Q14393 721 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 NAA30Q147X3 362 aaPredicted RBP12.46□□□□□ -0.41
TPM1-209ENST00000558072 CST6Q15828 149 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 QPCTQ16769 361 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 UGP2Q16851 508 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 FNBP1LQ5T0N5 605 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 SYCP2LQ5T4T6 812 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 DENND2CQ68D51 928 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 DENND5AQ6IQ26 1287 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 USP30Q70CQ3 517 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 ZNF534Q76KX8 674 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 ERN2Q76MJ5 926 aaKnown RBP12.46□□□□□ -0.41
TPM1-209ENST00000558072 HDXQ7Z353 690 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 KDELC2Q7Z4H8 507 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 GLT6D1Q7Z4J2 308 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 CACUL1Q86Y37 369 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 CHST14Q8NCH0 376 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 FBXO36Q8NEA4 188 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 OR6K2Q8NGY2 324 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 CALML6Q8TD86 181 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 SCG3Q8WXD2 468 aaKnown RBP12.46□□□□□ -0.41
TPM1-209ENST00000558072 EDAQ92838 391 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 SIGLEC10Q96LC7 697 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 MCCC1Q96RQ3 725 aaPredicted RBP12.46□□□□□ -0.41
TPM1-209ENST00000558072 FAM129BQ96TA1 746 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 GPR63Q9BZJ6 419 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 KDM4CQ9H3R0 1056 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 EPHX3Q9H6B9 360 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 NSMCE4AQ9NXX6 385 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 PKP3Q9Y446 797 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 TCAF1Q9Y4C2 921 aa12.46□□□□□ -0.41
TPM1-209ENST00000558072 A0A087WUV0 522 aaPredicted RBP12.45□□□□□ -0.42
TPM1-209ENST00000558072 ATP8B1O43520 1251 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 AP1G1O43747 822 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 GKP32189 559 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 VIPR1P32241 457 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 SLC8A1P32418 973 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 HMGCLP35914 325 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 PPARGP37231 505 aaPredicted RBP12.45□□□□□ -0.42
TPM1-209ENST00000558072 ELK3P41970 407 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 FZD5Q13467 585 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 NAB1Q13506 487 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 GALNT3Q14435 633 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 CRY1Q16526 586 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 MAMSTRQ6ZN01 415 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 C3orf62Q6ZUJ4 267 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 TMEM135Q86UB9 458 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 TMPRSS6Q8IU80 811 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 MMAAQ8IVH4 418 aaKnown RBP12.45□□□□□ -0.42
TPM1-209ENST00000558072 SPEM1Q8N4L4 309 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 GSDMBQ8TAX9 411 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 BLOC1S5Q8TDH9 187 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 CLDN23Q96B33 292 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 SIPA1Q96FS4 1042 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 NSMCE3Q96MG7 304 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 TTC1Q99614 292 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 OMDQ99983 421 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 APOL2Q9BQE5 337 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 COL25A1Q9BXS0 654 aaPredicted RBP12.45□□□□□ -0.42
TPM1-209ENST00000558072 SLC6A17Q9H1V8 727 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 NEUROG2Q9H2A3 272 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 ZFYVE1Q9HBF4 777 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 FZD4Q9ULV1 537 aa12.45□□□□□ -0.42
TPM1-209ENST00000558072 SIT1Q9Y3P8 196 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms