RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ADGRE3Q9BY15 652 aa25.67■■□□□ 1.7
SMAD6-202ENST00000557916 SMOC1Q9H4F8 434 aa25.67■■□□□ 1.7
SMAD6-202ENST00000557916 DMTF1Q9Y222 760 aa25.67■■□□□ 1.7
SMAD6-202ENST00000557916 FANCGO15287 622 aa25.66■■□□□ 1.7
SMAD6-202ENST00000557916 BCAT2O15382 392 aaPredicted RBP25.66■■□□□ 1.7
SMAD6-202ENST00000557916 LRP3O75074 770 aa25.66■■□□□ 1.7
SMAD6-202ENST00000557916 CYP2A6P11509 494 aaPredicted RBP25.66■■□□□ 1.7
SMAD6-202ENST00000557916 PSMB4P28070 264 aa25.66■■□□□ 1.7
SMAD6-202ENST00000557916 LIG3P49916 1009 aa25.66■■□□□ 1.7
SMAD6-202ENST00000557916 RALGDSQ12967 914 aa25.66■■□□□ 1.7
SMAD6-202ENST00000557916 KDELC1Q6UW63 502 aa25.66■■□□□ 1.7
SMAD6-202ENST00000557916 USP45Q70EL2 814 aa25.66■■□□□ 1.7
SMAD6-202ENST00000557916 RABEPKQ7Z6M1 372 aa25.66■■□□□ 1.7
SMAD6-202ENST00000557916 CEP76Q8TAP6 659 aa25.66■■□□□ 1.7
SMAD6-202ENST00000557916 RMDN1Q96DB5 314 aa25.66■■□□□ 1.7
SMAD6-202ENST00000557916 SERAC1Q96JX3 654 aa25.66■■□□□ 1.7
SMAD6-202ENST00000557916 MCCC1Q96RQ3 725 aaPredicted RBP25.66■■□□□ 1.7
SMAD6-202ENST00000557916 TRIB3Q96RU7 358 aa25.66■■□□□ 1.7
SMAD6-202ENST00000557916 C1QTNF2Q9BXJ5 285 aa25.66■■□□□ 1.7
SMAD6-202ENST00000557916 AP1M1Q9BXS5 423 aa25.66■■□□□ 1.7
SMAD6-202ENST00000557916 A0A0J9YYE9 177 aa25.65■■□□□ 1.7
SMAD6-202ENST00000557916 A0A1B0GTW7 788 aa25.65■■□□□ 1.7
SMAD6-202ENST00000557916 ANXA9O76027 345 aa25.65■■□□□ 1.7
SMAD6-202ENST00000557916 TM7SF2O76062 418 aa25.65■■□□□ 1.7
SMAD6-202ENST00000557916 PAK4O96013 591 aaPredicted RBP25.65■■□□□ 1.7
SMAD6-202ENST00000557916 IFNB1P01574 187 aa25.65■■□□□ 1.7
SMAD6-202ENST00000557916 TRBC1P01850 177 aa25.65■■□□□ 1.7
SMAD6-202ENST00000557916 ALPIP09923 528 aa25.65■■□□□ 1.7
SMAD6-202ENST00000557916 VIPR1P32241 457 aa25.65■■□□□ 1.7
SMAD6-202ENST00000557916 HNF1BP35680 557 aa25.65■■□□□ 1.7
SMAD6-202ENST00000557916 WNT3AP56704 352 aa25.65■■□□□ 1.7
SMAD6-202ENST00000557916 MPP3Q13368 585 aa25.65■■□□□ 1.7
SMAD6-202ENST00000557916 PRPSAP1Q14558 356 aa25.65■■□□□ 1.7
SMAD6-202ENST00000557916 DUOXA1Q1HG43 343 aa25.65■■□□□ 1.7
SMAD6-202ENST00000557916 P3H1Q32P28 736 aa25.65■■□□□ 1.7
SMAD6-202ENST00000557916 SMIM14Q96QK8 99 aa25.65■■□□□ 1.7
SMAD6-202ENST00000557916 GORASP1Q9BQQ3 440 aa25.65■■□□□ 1.7
SMAD6-202ENST00000557916 TM9SF3Q9HD45 589 aa25.65■■□□□ 1.7
SMAD6-202ENST00000557916 SEMA4GQ9NTN9 838 aa25.65■■□□□ 1.7
SMAD6-202ENST00000557916 PRR5-ARHGAP8B1AHC4 643 aa25.64■■□□□ 1.7
SMAD6-202ENST00000557916 PATE3B3GLJ2 98 aa25.64■■□□□ 1.7
SMAD6-202ENST00000557916 ANKRD66B4E2M5 251 aa25.64■■□□□ 1.7
SMAD6-202ENST00000557916 CFIP05156 583 aa25.64■■□□□ 1.7
SMAD6-202ENST00000557916 ZNF806P0C7X5 589 aa25.64■■□□□ 1.7
SMAD6-202ENST00000557916 CASQ1P31415 396 aa25.64■■□□□ 1.7
SMAD6-202ENST00000557916 KCNJ1P48048 391 aa25.64■■□□□ 1.7
SMAD6-202ENST00000557916 GRIA4P48058 902 aa25.64■■□□□ 1.7
SMAD6-202ENST00000557916 GEMP55040 296 aa25.64■■□□□ 1.7
SMAD6-202ENST00000557916 RACK1P63244 317 aaKnown RBP25.64■■□□□ 1.7
SMAD6-202ENST00000557916 FGL2Q14314 439 aa25.64■■□□□ 1.7
SMAD6-202ENST00000557916 GALNT3Q14435 633 aa25.64■■□□□ 1.7
SMAD6-202ENST00000557916 PTPRRQ15256 657 aa25.64■■□□□ 1.7
SMAD6-202ENST00000557916 QPCTQ16769 361 aa25.64■■□□□ 1.7
SMAD6-202ENST00000557916 PARP6Q2NL67 630 aa25.64■■□□□ 1.7
SMAD6-202ENST00000557916 NAPEPLDQ6IQ20 393 aa25.64■■□□□ 1.7
SMAD6-202ENST00000557916 CCDC70Q6NSX1 233 aa25.64■■□□□ 1.7
SMAD6-202ENST00000557916 SYT10Q6XYQ8 523 aa25.64■■□□□ 1.7
SMAD6-202ENST00000557916 LIPIQ6XZB0 460 aa25.64■■□□□ 1.7
SMAD6-202ENST00000557916 ASB12Q8WXK4 309 aa25.64■■□□□ 1.7
SMAD6-202ENST00000557916 CAPZA3Q96KX2 299 aa25.64■■□□□ 1.7
SMAD6-202ENST00000557916 MRGPRX2Q96LB1 330 aa25.64■■□□□ 1.7
SMAD6-202ENST00000557916 SLC6A18Q96N87 628 aa25.64■■□□□ 1.7
SMAD6-202ENST00000557916 AAR2Q9Y312 384 aaKnown RBP25.64■■□□□ 1.7
SMAD6-202ENST00000557916 EP300Q09472 2414 aaPredicted RBP25.64■■□□□ 1.69
SMAD6-202ENST00000557916 NPIPB15A6NHN6 443 aaPredicted RBP25.63■■□□□ 1.69
SMAD6-202ENST00000557916 PRAMEF26H0Y7S4 382 aa25.63■■□□□ 1.69
SMAD6-202ENST00000557916 NDST3O95803 873 aa25.63■■□□□ 1.69
SMAD6-202ENST00000557916 ELFN1P0C7U0 828 aa25.63■■□□□ 1.69
SMAD6-202ENST00000557916 C6P13671 934 aa25.63■■□□□ 1.69
SMAD6-202ENST00000557916 ACTN2P35609 894 aa25.63■■□□□ 1.69
SMAD6-202ENST00000557916 TNNT3P45378 269 aaPredicted RBP25.63■■□□□ 1.69
SMAD6-202ENST00000557916 CSRP2Q16527 193 aa25.63■■□□□ 1.69
SMAD6-202ENST00000557916 TRIM61Q5EBN2 209 aa25.63■■□□□ 1.69
SMAD6-202ENST00000557916 CCDC89Q8N998 374 aa25.63■■□□□ 1.69
SMAD6-202ENST00000557916 IPMKQ8NFU5 416 aa25.63■■□□□ 1.69
SMAD6-202ENST00000557916 MAGOHBQ96A72 148 aaKnown RBP25.63■■□□□ 1.69
SMAD6-202ENST00000557916 PPP1R2P1Q96PQ5 205 aa25.63■■□□□ 1.69
SMAD6-202ENST00000557916 MLPHQ9BV36 600 aaPredicted RBP25.63■■□□□ 1.69
SMAD6-202ENST00000557916 PARD6AQ9NPB6 346 aa25.63■■□□□ 1.69
SMAD6-202ENST00000557916 AASDHPPTQ9NRN7 309 aa25.63■■□□□ 1.69
SMAD6-202ENST00000557916 COQ6Q9Y2Z9 468 aa25.63■■□□□ 1.69
SMAD6-202ENST00000557916 TRPM6Q9BX84 2022 aa25.63■■□□□ 1.69
SMAD6-202ENST00000557916 LOC285095A0A1B0GVY8 99 aa25.63■■□□□ 1.69
SMAD6-202ENST00000557916 CAPN8A6NHC0 703 aa25.63■■□□□ 1.69
SMAD6-202ENST00000557916 WNT9AO14904 365 aa25.63■■□□□ 1.69
SMAD6-202ENST00000557916 KHNYNO15037 678 aaKnown RBP25.63■■□□□ 1.69
SMAD6-202ENST00000557916 LZTS3O60299 673 aaPredicted RBP25.63■■□□□ 1.69
SMAD6-202ENST00000557916 METTL18O95568 372 aa25.63■■□□□ 1.69
SMAD6-202ENST00000557916 EPOP01588 193 aa25.63■■□□□ 1.69
SMAD6-202ENST00000557916 HNRNPA2B1P22626 353 aaKnown RBP25.63■■□□□ 1.69
SMAD6-202ENST00000557916 TGM1P22735 817 aa25.63■■□□□ 1.69
SMAD6-202ENST00000557916 AKT2P31751 481 aa25.63■■□□□ 1.69
SMAD6-202ENST00000557916 AFF3P51826 1226 aaKnown RBP25.63■■□□□ 1.69
SMAD6-202ENST00000557916 SLC23A3Q6PIS1 610 aa25.63■■□□□ 1.69
SMAD6-202ENST00000557916 NYAP1Q6ZVC0 841 aa25.63■■□□□ 1.69
SMAD6-202ENST00000557916 GSTA5Q7RTV2 222 aa25.63■■□□□ 1.69
SMAD6-202ENST00000557916 MYOCQ99972 504 aa25.63■■□□□ 1.69
SMAD6-202ENST00000557916 FZD3Q9NPG1 666 aa25.63■■□□□ 1.69
SMAD6-202ENST00000557916 SLC6A14Q9UN76 642 aa25.63■■□□□ 1.69
SMAD6-202ENST00000557916 RIF1Q5UIP0 2472 aaKnown RBP25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms