RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-213ENST00000557685 FAM120BQ96EK7 910 aaKnown RBP4.5□□□□□ -1.69
EFCAB11-213ENST00000557685 FTOQ9C0B1 505 aaKnown RBP eCLIP4.5□□□□□ -1.69
EFCAB11-213ENST00000557685 SMARCAD1Q9H4L7 1026 aa4.5□□□□□ -1.69
EFCAB11-213ENST00000557685 SH2D4AQ9H788 454 aa4.5□□□□□ -1.69
EFCAB11-213ENST00000557685 RRP7BPQ9NSQ0 103 aa4.5□□□□□ -1.69
EFCAB11-213ENST00000557685 SIRT3Q9NTG7 399 aaPredicted RBP4.5□□□□□ -1.69
EFCAB11-213ENST00000557685 CNOT8Q9UFF9 292 aaKnown RBP4.5□□□□□ -1.69
EFCAB11-213ENST00000557685 CEPT1Q9Y6K0 416 aa4.5□□□□□ -1.69
EFCAB11-213ENST00000557685 IGLV5-39A0A0G2JS06 123 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 RGS11O94810 467 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 OR2C1O95371 312 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 CENPBP07199 599 aaPredicted RBP4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 CBSLP0DN79 551 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 ARSBP15848 533 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 ZNF182P17025 639 aaPredicted RBP4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 CHATP28329 748 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 CBSP35520 551 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 ABCG1P45844 678 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 ZP1P60852 638 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 ST3GAL1Q11201 340 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 PTGR1Q14914 329 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 RABEP1Q15276 862 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 TWIST1Q15672 202 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 COL28A1Q2UY09 1125 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 USP41Q3LFD5 358 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 CXorf66Q5JRM2 361 aaPredicted RBP4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 C6orf141Q5SZD1 244 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 PLEKHA7Q6IQ23 1121 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 C16orf54Q6UWD8 224 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 LCTLQ6UWM7 567 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 MON1BQ7L1V2 547 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 LINGO2Q7L985 606 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 PALB2Q86YC2 1186 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 TICAM1Q8IUC6 712 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 WDR63Q8IWG1 891 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 SFTPA2Q8IWL1 248 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 MB21D2Q8IYB1 491 aaPredicted RBP4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 HUS1BQ8NHY5 278 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 SNRNP27Q8WVK2 155 aaKnown RBP4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 ZNF570Q96NI8 536 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 NCAPGQ9BPX3 1015 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 TKTL2Q9H0I9 626 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 PDZD7Q9H5P4 517 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 CYSLTR2Q9NS75 346 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 TTC3P53804 2025 aa4.49□□□□□ -1.69
EFCAB11-213ENST00000557685 LY6G6EA0A0G2JKS1 128 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 hCG_1807616A0A1W2PRN6 198 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 A8MZ25 164 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 MS4A18H0YCH9 400 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 FIBPO43427 364 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 NDUFS3O75489 264 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 SLC25A12O75746 678 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 NDUFB4O95168 129 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 CSH1P0DML2 217 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 CSH2P0DML3 217 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 PORP16435 677 aaPredicted RBP4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 CD58P19256 250 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 GPTP24298 496 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 UBA7P41226 1012 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 F2RL1P55085 397 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 NLRP5P59047 1200 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 EPS8Q12929 822 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 CHAF1BQ13112 559 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 TOMM20Q15388 145 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 COLEC12Q5KU26 742 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 PLEKHS1Q5SXH7 462 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 DPY19L2P1Q6NXN4 242 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 FBXO46Q6PJ61 603 aaPredicted RBP4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 GLDNQ6ZMI3 551 aaPredicted RBP4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 CHST9Q7L1S5 443 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 C1orf131Q8NDD1 294 aaKnown RBP4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 ZNF548Q8NEK5 533 aaPredicted RBP4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 SLC25A28Q96A46 364 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 ARHGEF26Q96DR7 871 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 PGAM5Q96HS1 289 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 SLC41A2Q96JW4 573 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 C1orf74Q96LT6 269 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 NLRP4Q96MN2 994 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 FAM110AQ9BQ89 295 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 SPRTNQ9H040 489 aaPredicted RBP4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 WDR26Q9H7D7 661 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 CATSPERBQ9H7T0 1116 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 POT1Q9NUX5 634 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 ADD3Q9UEY8 706 aaKnown RBP4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 TTLL3Q9Y4R7 772 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 SRPRBQ9Y5M8 271 aaKnown RBP4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 SESN1Q9Y6P5 492 aa4.48□□□□□ -1.69
EFCAB11-213ENST00000557685 WDR91A4D1P6 747 aa4.47□□□□□ -1.69
EFCAB11-213ENST00000557685 FAM90A8PA6NJQ4 464 aa4.47□□□□□ -1.69
EFCAB11-213ENST00000557685 PPEF2O14830 753 aa4.47□□□□□ -1.69
EFCAB11-213ENST00000557685 HCRTR2O43614 444 aa4.47□□□□□ -1.69
EFCAB11-213ENST00000557685 LDB2O43679 373 aa4.47□□□□□ -1.69
EFCAB11-213ENST00000557685 SYF2O95926 243 aaKnown RBP4.47□□□□□ -1.69
EFCAB11-213ENST00000557685 FAM90A13PP0C7W8 464 aa4.47□□□□□ -1.69
EFCAB11-213ENST00000557685 FAM90A24PP0C7X0 464 aa4.47□□□□□ -1.69
EFCAB11-213ENST00000557685 MCM3P25205 808 aa4.47□□□□□ -1.69
EFCAB11-213ENST00000557685 GARSP41250 739 aaKnown RBP4.47□□□□□ -1.69
EFCAB11-213ENST00000557685 PLCD1P51178 756 aa4.47□□□□□ -1.69
EFCAB11-213ENST00000557685 CDH8P55286 799 aa4.47□□□□□ -1.69
EFCAB11-213ENST00000557685 SORDQ00796 357 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms