RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 LRRD1A4D1F6 860 aa16.8■□□□□ 0.28
NEK9-211ENST00000557673 NME1P15531 152 aaKnown RBP16.8■□□□□ 0.28
NEK9-211ENST00000557673 ERCC2P18074 760 aa16.8■□□□□ 0.28
NEK9-211ENST00000557673 ITGB7P26010 798 aa16.8■□□□□ 0.28
NEK9-211ENST00000557673 CCNHP51946 323 aaPredicted RBP16.8■□□□□ 0.28
NEK9-211ENST00000557673 VAC14Q08AM6 782 aa16.8■□□□□ 0.28
NEK9-211ENST00000557673 SGCGQ13326 291 aa16.8■□□□□ 0.28
NEK9-211ENST00000557673 PDK2Q15119 407 aa16.8■□□□□ 0.28
NEK9-211ENST00000557673 ISXQ2M1V0 245 aa16.8■□□□□ 0.28
NEK9-211ENST00000557673 CARD16Q5EG05 197 aa16.8■□□□□ 0.28
NEK9-211ENST00000557673 PCSK4Q6UW60 755 aa16.8■□□□□ 0.28
NEK9-211ENST00000557673 ZNF354CQ86Y25 554 aa16.8■□□□□ 0.28
NEK9-211ENST00000557673 UMODL1-AS1Q8N2C9 162 aa16.8■□□□□ 0.28
NEK9-211ENST00000557673 NPWQ8N729 165 aa16.8■□□□□ 0.28
NEK9-211ENST00000557673 ZNF548Q8NEK5 533 aaPredicted RBP16.8■□□□□ 0.28
NEK9-211ENST00000557673 RAPGEF5Q92565 580 aa16.8■□□□□ 0.28
NEK9-211ENST00000557673 GLMNQ92990 594 aa16.8■□□□□ 0.28
NEK9-211ENST00000557673 FAF2Q96CS3 445 aa16.8■□□□□ 0.28
NEK9-211ENST00000557673 ZNF830Q96NB3 372 aaPredicted RBP16.8■□□□□ 0.28
NEK9-211ENST00000557673 KLC2Q9H0B6 622 aa16.8■□□□□ 0.28
NEK9-211ENST00000557673 CPNE5Q9HCH3 593 aa16.8■□□□□ 0.28
NEK9-211ENST00000557673 GPR27Q9NS67 375 aa16.8■□□□□ 0.28
NEK9-211ENST00000557673 HPCAL4Q9UM19 191 aa16.8■□□□□ 0.28
NEK9-211ENST00000557673 LY6G6EA0A0G2JKS1 128 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 C3orf70A6NLC5 250 aaPredicted RBP16.79■□□□□ 0.28
NEK9-211ENST00000557673 ZNF487B1APH4 448 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 FPGTO14772 594 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 DAPK3O43293 454 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 AP1G1O43747 822 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 PALMO75781 387 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 NEBLO76041 1014 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 PAK4O96013 591 aaPredicted RBP16.79■□□□□ 0.28
NEK9-211ENST00000557673 TNNT1P13805 278 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 ADRB3P13945 408 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 IL4RP24394 825 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 CTNNA1P35221 906 aaKnown RBP16.79■□□□□ 0.28
NEK9-211ENST00000557673 RPIAP49247 311 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 GEMIN4P57678 1058 aaKnown RBP16.79■□□□□ 0.28
NEK9-211ENST00000557673 MMRN1Q13201 1228 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 FZD2Q14332 565 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 PARP15Q460N3 678 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 ZNF542PQ5EBM4 170 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 VSIG1Q86XK7 387 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 RYBPQ8N488 228 aaPredicted RBP16.79■□□□□ 0.28
NEK9-211ENST00000557673 RNF10Q8N5U6 811 aaKnown RBP16.79■□□□□ 0.28
NEK9-211ENST00000557673 NETO2Q8NC67 525 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 KCTD6Q8NC69 237 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 OR6K2Q8NGY2 324 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 KIAA1524Q8TCG1 905 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 SNRNP27Q8WVK2 155 aaKnown RBP16.79■□□□□ 0.28
NEK9-211ENST00000557673 BTN2A2Q8WVV5 523 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 KRT35Q92764 455 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 HMCESQ96FZ2 354 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 BMFQ96LC9 184 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 LENG8Q96PV6 779 aaPredicted RBP16.79■□□□□ 0.28
NEK9-211ENST00000557673 HEPHQ9BQS7 1158 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 ZDHHC6Q9H6R6 413 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 LRRC19Q9H756 370 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 ASCL3Q9NQ33 180 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 ETNK2Q9NVF9 386 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 DDX56Q9NY93 547 aaKnown RBP16.79■□□□□ 0.28
NEK9-211ENST00000557673 DONSONQ9NYP3 566 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 HECAQ9UBI9 543 aaPredicted RBP16.79■□□□□ 0.28
NEK9-211ENST00000557673 GUCA1BQ9UMX6 200 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 MFHAS1Q9Y4C4 1052 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 U3KQA8 63 aa16.79■□□□□ 0.28
NEK9-211ENST00000557673 CXorf51AA0A1B0GTR3 108 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 CPED1A4D0V7 1026 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 POM121BA6NF01 834 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 RASA4BC9J798 803 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 TPP1O14773 563 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 AQP9O43315 295 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 RASA4O43374 803 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 TSPAN6O43657 245 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 KDELR3O43731 214 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 TCEA3O75764 348 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 AMPD1P23109 780 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 KDELR1P24390 212 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 CTNNA2P26232 953 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 GKP32189 559 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 YBEYP58557 167 aaPredicted RBP16.78■□□□□ 0.28
NEK9-211ENST00000557673 CDKN3Q16667 212 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 ZFYVE27Q5T4F4 411 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 AFMIDQ63HM1 303 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 RBM44Q6ZP01 1051 aaKnown RBP16.78■□□□□ 0.28
NEK9-211ENST00000557673 NT5DC3Q86UY8 548 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 MAP7D3Q8IWC1 876 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 ARHGAP12Q8IWW6 846 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 KATNAL2Q8IYT4 538 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 SYCE1Q8N0S2 351 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 WDR48Q8TAF3 677 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 RAB7BQ96AH8 199 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 ISG20Q96AZ6 181 aaKnown RBP16.78■□□□□ 0.28
NEK9-211ENST00000557673 SLC46A1Q96NT5 459 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 IL12RB2Q99665 862 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 LZTFL1Q9NQ48 299 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 PCDHGA8Q9Y5G5 932 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 FADS3Q9Y5Q0 445 aa16.78■□□□□ 0.28
NEK9-211ENST00000557673 TDRD6O60522 2096 aaKnown RBP16.77■□□□□ 0.28
NEK9-211ENST00000557673 ATMQ13315 3056 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms