RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 TTC24A2A3L6 582 aaPredicted RBP12.57□□□□□ -0.4
SLIRP-211ENST00000557623 MTSS1O43312 755 aa12.57□□□□□ -0.4
SLIRP-211ENST00000557623 MMP20O60882 483 aa12.57□□□□□ -0.4
SLIRP-211ENST00000557623 CPP00450 1065 aa12.57□□□□□ -0.4
SLIRP-211ENST00000557623 JCHAINP01591 159 aa12.57□□□□□ -0.4
SLIRP-211ENST00000557623 CCDC175P0C221 793 aa12.57□□□□□ -0.4
SLIRP-211ENST00000557623 THEGLP0DJG4 465 aa12.57□□□□□ -0.4
SLIRP-211ENST00000557623 PTPN7P35236 360 aa12.57□□□□□ -0.4
SLIRP-211ENST00000557623 MMP12P39900 470 aa12.57□□□□□ -0.4
SLIRP-211ENST00000557623 ARRB1P49407 418 aaPredicted RBP12.57□□□□□ -0.4
SLIRP-211ENST00000557623 FAM193AP78312 1265 aa12.57□□□□□ -0.4
SLIRP-211ENST00000557623 FGL2Q14314 439 aa12.57□□□□□ -0.4
SLIRP-211ENST00000557623 ARMC12Q5T9G4 340 aa12.57□□□□□ -0.4
SLIRP-211ENST00000557623 NPNTQ6UXI9 565 aa12.57□□□□□ -0.4
SLIRP-211ENST00000557623 KYAT3Q6YP21 454 aaKnown RBP12.57□□□□□ -0.4
SLIRP-211ENST00000557623 ZSWIM9Q86XI8 627 aa12.57□□□□□ -0.4
SLIRP-211ENST00000557623 TFB1MQ8WVM0 346 aaKnown RBP12.57□□□□□ -0.4
SLIRP-211ENST00000557623 ELF4Q99607 663 aaPredicted RBP12.57□□□□□ -0.4
SLIRP-211ENST00000557623 MYOCQ99972 504 aa12.57□□□□□ -0.4
SLIRP-211ENST00000557623 WRAP53Q9BUR4 548 aaKnown RBP12.57□□□□□ -0.4
SLIRP-211ENST00000557623 IL21RQ9HBE5 538 aa12.57□□□□□ -0.4
SLIRP-211ENST00000557623 FZD3Q9NPG1 666 aa12.57□□□□□ -0.4
SLIRP-211ENST00000557623 FNDC3AQ9Y2H6 1198 aaKnown RBP12.57□□□□□ -0.4
SLIRP-211ENST00000557623 PCDHB9Q9Y5E1 797 aa12.57□□□□□ -0.4
SLIRP-211ENST00000557623 RAI2Q9Y5P3 530 aa12.57□□□□□ -0.4
SLIRP-211ENST00000557623 TDRD6O60522 2096 aaKnown RBP12.57□□□□□ -0.4
SLIRP-211ENST00000557623 A0A1B0GTQ1 180 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 HACD1B0YJ81 288 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 H0Y8X5 98 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 KCNK1O00180 336 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 TOR1BO14657 336 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 FLRT2O43155 660 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 LZTS3O60299 673 aaPredicted RBP12.56□□□□□ -0.4
SLIRP-211ENST00000557623 PCDHGA12O60330 932 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 KCNK5O95279 499 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 PGLSO95336 258 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 HLA-DQB2P05538 268 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 CYP2A6P11509 494 aaPredicted RBP12.56□□□□□ -0.4
SLIRP-211ENST00000557623 CEACAM1P13688 526 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 CD59P13987 128 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 ITIH2P19823 946 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 RABIFP47224 123 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 PEX5P50542 639 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 NOVA1P51513 510 aaKnown RBP12.56□□□□□ -0.4
SLIRP-211ENST00000557623 DSC2Q02487 901 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 TRAF2Q12933 501 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 AGERQ15109 404 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 PRKD1Q15139 912 aaPredicted RBP12.56□□□□□ -0.4
SLIRP-211ENST00000557623 LLGL1Q15334 1064 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 INAVAQ3KP66 663 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 PPM1JQ5JR12 505 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 CCDC181Q5TID7 509 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 GCNT7Q6ZNI0 430 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 ZNF662Q6ZS27 426 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 BBS12Q6ZW61 710 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 DPPA4Q7L190 304 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 PTAR1Q7Z6K3 402 aaPredicted RBP12.56□□□□□ -0.4
SLIRP-211ENST00000557623 PIP4P1Q86T03 277 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 LRRN4Q8WUT4 740 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 ANP32BQ92688 251 aaKnown RBP12.56□□□□□ -0.4
SLIRP-211ENST00000557623 BMFQ96LC9 184 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 NSMCE3Q96MG7 304 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 KLF6Q99612 283 aaPredicted RBP12.56□□□□□ -0.4
SLIRP-211ENST00000557623 OSBPL8Q9BZF1 889 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 CA5BQ9Y2D0 317 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 CEP250Q9BV73 2442 aa12.56□□□□□ -0.4
SLIRP-211ENST00000557623 A0A0U1RQJ8 604 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 APOC4-APOC2K7ER74 178 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 KCNK3O14649 394 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 RAD51BO15315 384 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 TJP3O95049 919 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 APOC2P02655 101 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 ELFN1P0C7U0 828 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 C6P13671 934 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 PECAM1P16284 738 aaPredicted RBP12.55□□□□□ -0.4
SLIRP-211ENST00000557623 VIPR1P32241 457 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 RXRGP48443 463 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 LIG3P49916 1009 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 CLDN2P57739 230 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 RPL26P61254 145 aaKnown RBP12.55□□□□□ -0.4
SLIRP-211ENST00000557623 FOXK2Q01167 660 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 XRCC4Q13426 336 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 LRRC14Q15048 493 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 TEX44Q53QW1 395 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 DBX2Q6ZNG2 339 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 Q6ZSR6 202 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 USP45Q70EL2 814 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 SPATS2Q86XZ4 545 aaKnown RBP12.55□□□□□ -0.4
SLIRP-211ENST00000557623 NAXDQ8IW45 347 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 DEFB124Q8NES8 71 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 OR13H1Q8NG92 308 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 ARRDC2Q8TBH0 407 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 CENPTQ96BT3 561 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 IFT43Q96FT9 208 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 SCRN2Q96FV2 425 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 VAT1Q99536 393 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 FERMT1Q9BQL6 677 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 HEMGNQ9BXL5 484 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 KCTD5Q9NXV2 234 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 SEPT10Q9P0V9 454 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms