RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 PCDHGA7Q9Y5G6 932 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 FADS3Q9Y5Q0 445 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 NBASA2RRP1 2371 aa5.95□□□□□ -1.46
VPS33B-207ENST00000557470 TRPM6Q9BX84 2022 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 A0A0D9SEW6 157 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 FAM237AA0A1B0GTK4 181 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 IGLON5A6NGN9 336 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 A6NHS1 94 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 D6RAR5 112 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 LMO7DNF2Z398 122 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 I6L893 689 aaPredicted RBP5.94□□□□□ -1.46
VPS33B-207ENST00000557470 FPGTO14772 594 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 PMM2O15305 246 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 AP1G1O43747 822 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 GADD45BO75293 160 aaPredicted RBP5.94□□□□□ -1.46
VPS33B-207ENST00000557470 PAGE1O75459 146 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 ZNF821O75541 412 aaPredicted RBP5.94□□□□□ -1.46
VPS33B-207ENST00000557470 GRAP2O75791 330 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 AFPP02771 609 aaKnown RBP5.94□□□□□ -1.46
VPS33B-207ENST00000557470 RHOCP08134 193 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 FAM157BP0CG42 384 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 WT1P19544 449 aaPredicted RBP5.94□□□□□ -1.46
VPS33B-207ENST00000557470 ADKP55263 362 aaKnown RBP5.94□□□□□ -1.46
VPS33B-207ENST00000557470 CDH4P55283 916 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 PFN3P60673 137 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 GCNT1Q02742 428 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 TLE1Q04724 770 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 NME3Q13232 169 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 SGCGQ13326 291 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 PDCLQ13371 301 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 SEPT6Q14141 434 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 MEA1Q16626 185 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 TBR1Q16650 682 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 C5orf22Q49AR2 442 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 SAMD5Q5TGI4 173 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 OTUD1Q5VV17 481 aaPredicted RBP5.94□□□□□ -1.46
VPS33B-207ENST00000557470 XKR5Q6UX68 686 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 PARS2Q7L3T8 475 aaKnown RBP5.94□□□□□ -1.46
VPS33B-207ENST00000557470 RAB11FIP2Q7L804 512 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 TFAP2DQ7Z6R9 452 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 VASH2Q86V25 355 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 ZNF683Q8IZ20 524 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 PHACTR4Q8IZ21 702 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 DEFB106AQ8N104 65 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 FBXO39Q8N4B4 442 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 DCAF4L2Q8NA75 395 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 TEX19Q8NA77 164 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 KYQ8NBH2 561 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 HTR3CQ8WXA8 447 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 NKD1Q969G9 470 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 KREMEN1Q96MU8 473 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 LENG8Q96PV6 779 aaPredicted RBP5.94□□□□□ -1.46
VPS33B-207ENST00000557470 CPXM1Q96SM3 734 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 TSG101Q99816 390 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 CLPBQ9H078 707 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 SIK2Q9H0K1 926 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 THAP9Q9H5L6 903 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 ACP6Q9NPH0 428 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 ANLNQ9NQW6 1124 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 UBP1Q9NZI7 540 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 PADI4Q9UM07 663 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 CNTN6Q9UQ52 1028 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 ITM2BQ9Y287 266 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 SNX10Q9Y5X0 201 aa5.94□□□□□ -1.46
VPS33B-207ENST00000557470 NBPF19A0A087WUL8 3843 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 PRAMEF33A0A0G2JMD5 474 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 LOC100996750A0A140TA64 210 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 A0A1W2PQM1 296 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 SERTM1A2A2V5 107 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 AGRPO00253 132 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 NVLO15381 856 aaKnown RBP5.93□□□□□ -1.46
VPS33B-207ENST00000557470 YY2O15391 372 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 MED7O43513 233 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 PRAMEF10O60809 474 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 HSF2BPO75031 334 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 PPFIA2O75334 1257 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 KATNA1O75449 491 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 ZMPSTE24O75844 475 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 ZNF202O95125 648 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 LETM1O95202 739 aaPredicted RBP5.93□□□□□ -1.46
VPS33B-207ENST00000557470 ADCY5O95622 1261 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 IGHA1P01876 353 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 NTRK1P04629 796 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 RPLP0P05388 317 aaKnown RBP5.93□□□□□ -1.46
VPS33B-207ENST00000557470 ANXA6P08133 673 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 LIPCP11150 499 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 SFTPCP11686 197 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 KRT5P13647 590 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 TSHRP16473 764 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 TFE3P19532 575 aaPredicted RBP5.93□□□□□ -1.46
VPS33B-207ENST00000557470 L1CAMP32004 1257 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 IGFALSP35858 605 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 RECQLP46063 649 aaPredicted RBP5.93□□□□□ -1.46
VPS33B-207ENST00000557470 SERPINH1P50454 418 aaKnown RBP5.93□□□□□ -1.46
VPS33B-207ENST00000557470 DNA2P51530 1060 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 CCNHP51946 323 aaPredicted RBP5.93□□□□□ -1.46
VPS33B-207ENST00000557470 THOP1P52888 689 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 INHBCP55103 352 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 CYP4F2P78329 520 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 CCL7P80098 99 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms