RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 GHRHRQ02643 423 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 CACNG1Q06432 222 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 TAF10Q12962 218 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 MAPKAPK3Q16644 382 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 PFKFB4Q16877 469 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 RASGEF1AQ8N9B8 481 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 ETNPPLQ8TBG4 499 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 STYXQ8WUJ0 223 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 DCAKDQ8WVC6 231 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 PIGUQ9H490 435 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 CCDC177Q9NQR7 707 aaPredicted RBP8.39□□□□□ -1.07
CHD8-213ENST00000557364 TRIM10Q9UDY6 481 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 LIMD1Q9UGP4 676 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 ELNP15502 786 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 MASP1P48740 699 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 BBS12Q6ZW61 710 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 MARK2Q7KZI7 788 aaKnown RBP8.39□□□□□ -1.07
CHD8-213ENST00000557364 CACUL1Q86Y37 369 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 NATD1Q8N6N6 113 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 PRCCQ92733 491 aaPredicted RBP8.39□□□□□ -1.07
CHD8-213ENST00000557364 SPATA9Q9BWV2 254 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 ST6GALNAC4Q9H4F1 302 aa8.39□□□□□ -1.07
CHD8-213ENST00000557364 PAGE1O75459 146 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 CCNYL3P0C7X3 344 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 COL6A2P12110 1019 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 NR2C1P13056 603 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 ME2P23368 584 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 PSMB4P28070 264 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 SF1Q15637 639 aaKnown RBP8.38□□□□□ -1.07
CHD8-213ENST00000557364 RFX4Q33E94 735 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 GPAT3Q53EU6 434 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 KLHL26Q53HC5 615 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 ZNF618Q5T7W0 954 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 KIAA0408Q6ZU52 694 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 OTOP2Q7RTS6 562 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 HDDC2Q7Z4H3 204 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 C11orf74Q86VG3 221 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 AHI1Q8N157 1196 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 FBXO25Q8TCJ0 367 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 FCRL2Q96LA5 508 aaPredicted RBP8.38□□□□□ -1.07
CHD8-213ENST00000557364 TM6SF2Q9BZW4 377 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 RHBGQ9H310 441 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 SRRDQ9UH36 339 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 NCANO14594 1321 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 MYH6P13533 1939 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 USP27XA6NNY8 438 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 MED26O95402 600 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 NDST3O95803 873 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 TSPAN19P0C672 248 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 CCDC166P0CW27 439 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 PSMD8P48556 350 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 PDGFRLQ15198 375 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 PTPRNQ16849 979 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 C3orf67Q6ZVT6 689 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 OR14C36Q8NHC7 312 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 HSD17B14Q9BPX1 270 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 ZCWPW1Q9H0M4 648 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 ARHGEF3Q9NR81 526 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 GMIPQ9P107 970 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 GULP1Q9UBP9 304 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 SLC12A4Q9UP95 1085 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 SLC27A5Q9Y2P5 690 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 ATXN2Q99700 1313 aaKnown RBP8.38□□□□□ -1.07
CHD8-213ENST00000557364 ARVCFO00192 962 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 IL6P05231 212 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 H2AFXP16104 143 aaPredicted RBP8.38□□□□□ -1.07
CHD8-213ENST00000557364 AGXTP21549 392 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 CRATP43155 626 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 GSTM5P46439 218 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 BNIP2Q12982 314 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 RALGPS1Q5JS13 557 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 WDR45BQ5MNZ6 344 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 SHC3Q92529 594 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 KAT5Q92993 513 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 LPPQ93052 612 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 NACC2Q96BF6 587 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 COL3A1P02461 1466 aaPredicted RBP8.38□□□□□ -1.07
CHD8-213ENST00000557364 GLYATL1P3A0A0U1RQE8 302 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 MRASO14807 208 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 RIPK2O43353 540 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 HGFP14210 728 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 CD44P16070 742 aaKnown RBP8.38□□□□□ -1.07
CHD8-213ENST00000557364 TPH1P17752 444 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 ACADLP28330 430 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 RBL1P28749 1068 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 TTKP33981 857 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 RIPOR1Q6ZS17 1223 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 KREMEN2Q8NCW0 462 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 EPS8L3Q8TE67 593 aaKnown RBP8.38□□□□□ -1.07
CHD8-213ENST00000557364 COPS5Q92905 334 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 AP2M1Q96CW1 435 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 SNRNP25Q9BV90 132 aaKnown RBP8.38□□□□□ -1.07
CHD8-213ENST00000557364 CRTAC1Q9NQ79 661 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 CLN6Q9NWW5 311 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 CCL16O15467 120 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 PRKG2Q13237 762 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 LARS2Q15031 903 aaKnown RBP8.38□□□□□ -1.07
CHD8-213ENST00000557364 GALNT7Q86SF2 657 aa8.38□□□□□ -1.07
CHD8-213ENST00000557364 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.38□□□□□ -1.07
CHD8-213ENST00000557364 SLC9A7Q96T83 725 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms