RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 UCNP55089 124 aa15.98■□□□□ 0.15
TUBB3-213ENST00000557262 C19orf57Q0VDD7 668 aa15.98■□□□□ 0.15
TUBB3-213ENST00000557262 SPIDRQ14159 915 aa15.98■□□□□ 0.15
TUBB3-213ENST00000557262 LIPIQ6XZB0 460 aa15.98■□□□□ 0.15
TUBB3-213ENST00000557262 CYP4V2Q6ZWL3 525 aaPredicted RBP15.98■□□□□ 0.15
TUBB3-213ENST00000557262 PAF1Q8N7H5 531 aa15.98■□□□□ 0.15
TUBB3-213ENST00000557262 ARL10Q8N8L6 244 aa15.98■□□□□ 0.15
TUBB3-213ENST00000557262 WDR36Q8NI36 951 aaKnown RBP15.98■□□□□ 0.15
TUBB3-213ENST00000557262 ECHDC3Q96DC8 303 aa15.98■□□□□ 0.15
TUBB3-213ENST00000557262 PRR11Q96HE9 360 aaPredicted RBP15.98■□□□□ 0.15
TUBB3-213ENST00000557262 TRIM7Q9C029 511 aa15.98■□□□□ 0.15
TUBB3-213ENST00000557262 CWC15Q9P013 229 aaKnown RBP15.98■□□□□ 0.15
TUBB3-213ENST00000557262 KLQ9UEF7 1012 aa15.98■□□□□ 0.15
TUBB3-213ENST00000557262 GPR34Q9UPC5 381 aa15.98■□□□□ 0.15
TUBB3-213ENST00000557262 DDX3XO00571 662 aaKnown RBP eCLIP15.97■□□□□ 0.152e-8■■□□□ 13.3
TUBB3-213ENST00000557262 NTN3O00634 580 aaPredicted RBP15.97■□□□□ 0.15
TUBB3-213ENST00000557262 TRAFD1O14545 582 aaPredicted RBP15.97■□□□□ 0.15
TUBB3-213ENST00000557262 LRCH4O75427 683 aa15.97■□□□□ 0.15
TUBB3-213ENST00000557262 RECQL5O94762 991 aaPredicted RBP15.97■□□□□ 0.15
TUBB3-213ENST00000557262 PCCBP05166 539 aa15.97■□□□□ 0.15
TUBB3-213ENST00000557262 KLHL30Q0D2K2 578 aa15.97■□□□□ 0.15
TUBB3-213ENST00000557262 RALGDSQ12967 914 aa15.97■□□□□ 0.15
TUBB3-213ENST00000557262 ARHGAP36Q6ZRI8 547 aa15.97■□□□□ 0.15
TUBB3-213ENST00000557262 NPWQ8N729 165 aa15.97■□□□□ 0.15
TUBB3-213ENST00000557262 PLA2G15Q8NCC3 412 aa15.97■□□□□ 0.15
TUBB3-213ENST00000557262 OR6C4Q8NGE1 309 aa15.97■□□□□ 0.15
TUBB3-213ENST00000557262 PCDH19Q8TAB3 1148 aa15.97■□□□□ 0.15
TUBB3-213ENST00000557262 ZNF653Q96CK0 615 aa15.97■□□□□ 0.15
TUBB3-213ENST00000557262 ZNF599Q96NL3 588 aa15.97■□□□□ 0.15
TUBB3-213ENST00000557262 PSKH2Q96QS6 385 aa15.97■□□□□ 0.15
TUBB3-213ENST00000557262 ZWILCHQ9H900 591 aa15.97■□□□□ 0.15
TUBB3-213ENST00000557262 MRPL47Q9HD33 250 aaKnown RBP15.97■□□□□ 0.15
TUBB3-213ENST00000557262 TMEM63CQ9P1W3 806 aa15.97■□□□□ 0.15
TUBB3-213ENST00000557262 SIRPGQ9P1W8 387 aa15.97■□□□□ 0.15
TUBB3-213ENST00000557262 SEPT3Q9UH03 358 aa15.97■□□□□ 0.15
TUBB3-213ENST00000557262 DGKBQ9Y6T7 804 aa15.97■□□□□ 0.15
TUBB3-213ENST00000557262 SCINQ9Y6U3 715 aa15.97■□□□□ 0.15
TUBB3-213ENST00000557262 RP1P56715 2156 aa15.96■□□□□ 0.15
TUBB3-213ENST00000557262 MGAQ8IWI9 3026 aa15.96■□□□□ 0.15
TUBB3-213ENST00000557262 CCDC187A0A096LP49 1063 aa15.96■□□□□ 0.15
TUBB3-213ENST00000557262 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.96■□□□□ 0.15
TUBB3-213ENST00000557262 CACNB4O00305 520 aaPredicted RBP15.96■□□□□ 0.15
TUBB3-213ENST00000557262 CASC3O15234 703 aaKnown RBP15.96■□□□□ 0.15
TUBB3-213ENST00000557262 KLK10O43240 276 aa15.96■□□□□ 0.15
TUBB3-213ENST00000557262 PRB1P04280 392 aa15.96■□□□□ 0.15
TUBB3-213ENST00000557262 HOXC4P09017 264 aaPredicted RBP15.96■□□□□ 0.15
TUBB3-213ENST00000557262 ELFN1P0C7U0 828 aa15.96■□□□□ 0.15
TUBB3-213ENST00000557262 MYBL1P10243 752 aa15.96■□□□□ 0.15
TUBB3-213ENST00000557262 PCK1P35558 622 aa15.96■□□□□ 0.15
TUBB3-213ENST00000557262 TRIM23P36406 574 aa15.96■□□□□ 0.15
TUBB3-213ENST00000557262 MLLT3P42568 568 aaPredicted RBP15.96■□□□□ 0.15
TUBB3-213ENST00000557262 TMPRSS3P57727 454 aa15.96■□□□□ 0.15
TUBB3-213ENST00000557262 AP1S1P61966 158 aa15.96■□□□□ 0.15
TUBB3-213ENST00000557262 DPYSQ14117 519 aa15.96■□□□□ 0.15
TUBB3-213ENST00000557262 LBRQ14739 615 aaKnown RBP15.96■□□□□ 0.15
TUBB3-213ENST00000557262 TCEA2Q15560 299 aa15.96■□□□□ 0.15
TUBB3-213ENST00000557262 BOLA3Q53S33 107 aa15.96■□□□□ 0.15
TUBB3-213ENST00000557262 FOXR1Q6PIV2 292 aa15.96■□□□□ 0.15
TUBB3-213ENST00000557262 NYAP1Q6ZVC0 841 aa15.96■□□□□ 0.15
TUBB3-213ENST00000557262 DPPA4Q7L190 304 aa15.96■□□□□ 0.15
TUBB3-213ENST00000557262 ARL14Q8N4G2 192 aa15.96■□□□□ 0.15
TUBB3-213ENST00000557262 KYQ8NBH2 561 aa15.96■□□□□ 0.15
TUBB3-213ENST00000557262 OR56A4Q8NGH8 313 aa15.96■□□□□ 0.15
TUBB3-213ENST00000557262 FUBP1Q96AE4 644 aaKnown RBP15.96■□□□□ 0.15
TUBB3-213ENST00000557262 TRIM11Q96F44 468 aa15.96■□□□□ 0.15
TUBB3-213ENST00000557262 CCDC97Q96F63 343 aaPredicted RBP15.96■□□□□ 0.15
TUBB3-213ENST00000557262 NAP1L5Q96NT1 182 aaPredicted RBP15.96■□□□□ 0.15
TUBB3-213ENST00000557262 RBM15Q96T37 977 aaKnown RBP eCLIP15.96■□□□□ 0.15
TUBB3-213ENST00000557262 ISCUQ9H1K1 167 aa15.96■□□□□ 0.15
TUBB3-213ENST00000557262 MYO1AQ9UBC5 1043 aa15.96■□□□□ 0.15
TUBB3-213ENST00000557262 KALRNO60229 2985 aa15.96■□□□□ 0.14
TUBB3-213ENST00000557262 A0A1B0GTH6 734 aa15.95■□□□□ 0.14
TUBB3-213ENST00000557262 A0A1W2PQ67 120 aa15.95■□□□□ 0.14
TUBB3-213ENST00000557262 TMEM202A6NGA9 273 aa15.95■□□□□ 0.14
TUBB3-213ENST00000557262 A8MX80 341 aa15.95■□□□□ 0.14
TUBB3-213ENST00000557262 CDRT15L2A8MXV6 281 aa15.95■□□□□ 0.14
TUBB3-213ENST00000557262 H3BRJ5 948 aa15.95■□□□□ 0.14
TUBB3-213ENST00000557262 TMX2-CTNND1H3BSU7 103 aa15.95■□□□□ 0.14
TUBB3-213ENST00000557262 TNFRSF10CO14798 259 aa15.95■□□□□ 0.14
TUBB3-213ENST00000557262 SKILP12757 684 aa15.95■□□□□ 0.14
TUBB3-213ENST00000557262 AMPD1P23109 780 aa15.95■□□□□ 0.14
TUBB3-213ENST00000557262 KELP23276 732 aa15.95■□□□□ 0.14
TUBB3-213ENST00000557262 ARL4AP40617 200 aa15.95■□□□□ 0.14
TUBB3-213ENST00000557262 KIAA1024LP59773 190 aa15.95■□□□□ 0.14
TUBB3-213ENST00000557262 CCL7P80098 99 aa15.95■□□□□ 0.14
TUBB3-213ENST00000557262 SKOR1P84550 965 aa15.95■□□□□ 0.14
TUBB3-213ENST00000557262 SLC10A7Q0GE19 358 aa15.95■□□□□ 0.14
TUBB3-213ENST00000557262 TMCO4Q5TGY1 634 aa15.95■□□□□ 0.14
TUBB3-213ENST00000557262 E4F1Q66K89 784 aaPredicted RBP15.95■□□□□ 0.14
TUBB3-213ENST00000557262 OGFOD3Q6PK18 319 aa15.95■□□□□ 0.14
TUBB3-213ENST00000557262 TAF8Q7Z7C8 310 aa15.95■□□□□ 0.14
TUBB3-213ENST00000557262 TP53INP2Q8IXH6 220 aa15.95■□□□□ 0.14
TUBB3-213ENST00000557262 GPR156Q8NFN8 814 aa15.95■□□□□ 0.14
TUBB3-213ENST00000557262 CCDC74AQ96AQ1 378 aa15.95■□□□□ 0.14
TUBB3-213ENST00000557262 NSMCE3Q96MG7 304 aa15.95■□□□□ 0.14
TUBB3-213ENST00000557262 GFM1Q96RP9 751 aaKnown RBP15.95■□□□□ 0.14
TUBB3-213ENST00000557262 SYNDIG1Q9H7V2 258 aa15.95■□□□□ 0.14
TUBB3-213ENST00000557262 CPNE5Q9HCH3 593 aa15.95■□□□□ 0.14
TUBB3-213ENST00000557262 RABGEF1Q9UJ41 708 aa15.95■□□□□ 0.14
TUBB3-213ENST00000557262 SSUH2Q9Y2M2 353 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms