RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 PNMA8BQ9ULN7 279 aaPredicted RBP5.81□□□□□ -1.48
ATXN3-245ENST00000556958 B3GNT3Q9Y2A9 372 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 PCDHGA6Q9Y5G7 932 aa5.81□□□□□ -1.48
ATXN3-245ENST00000556958 SDK2Q58EX2 2172 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 POLEQ07864 2286 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 PCSK5Q92824 1860 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 SSU72P8A0A1W2PR75 194 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 SOWAHDA6NJG2 315 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 B4DGG1 531 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 KCNN4O15554 427 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 MSI1O43347 362 aaKnown RBP5.8□□□□□ -1.48
ATXN3-245ENST00000556958 ICMTO60725 284 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 DLGAP3O95886 979 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 RPN1P04843 607 aaKnown RBP5.8□□□□□ -1.48
ATXN3-245ENST00000556958 CTSLP07711 333 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 STSP08842 583 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 THRAP10827 490 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 EPXP11678 715 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 KLK2P20151 261 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 L1CAMP32004 1257 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 ADRA1BP35368 520 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 KRT83P78385 493 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 DNM1Q05193 864 aaKnown RBP5.8□□□□□ -1.48
ATXN3-245ENST00000556958 FOXM1Q08050 763 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 PEX6Q13608 980 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 NR1D2Q14995 579 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 TCEA2Q15560 299 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 SNRNP35Q16560 246 aaKnown RBP5.8□□□□□ -1.48
ATXN3-245ENST00000556958 ALG11Q2TAA5 492 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 SKOR2Q2VWA4 1001 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-245ENST00000556958 C11orf91Q3C1V1 193 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 PLEKHN1Q494U1 663 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-245ENST00000556958 RAB41Q5JT25 222 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 ARL6IP4Q66PJ3 421 aaKnown RBP5.8□□□□□ -1.48
ATXN3-245ENST00000556958 MTFR2Q6P444 385 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 LINGO4Q6UY18 593 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 TMEM135Q86UB9 458 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 PIGZQ86VD9 579 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 VPS36Q86VN1 386 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 FJX1Q86VR8 437 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 LGI2Q8N0V4 545 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 CFAP52Q8N1V2 620 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 ZNF808Q8N4W9 903 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-245ENST00000556958 SH2D3CQ8N5H7 860 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 RBMXL3Q8N7X1 1067 aaKnown RBP5.8□□□□□ -1.48
ATXN3-245ENST00000556958 BMPERQ8N8U9 685 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 ATP11CQ8NB49 1132 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 OR2A12Q8NGT7 310 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 UBE2Q2Q8WVN8 375 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 EDEM1Q92611 657 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 LARP4BQ92615 738 aaKnown RBP5.8□□□□□ -1.48
ATXN3-245ENST00000556958 PRICKLE1Q96MT3 831 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-245ENST00000556958 RBM15Q96T37 977 aaKnown RBP eCLIP5.8□□□□□ -1.48
ATXN3-245ENST00000556958 BARD1Q99728 777 aaKnown RBP5.8□□□□□ -1.48
ATXN3-245ENST00000556958 ULBP3Q9BZM4 244 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 ULBP1Q9BZM6 244 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 ILKAPQ9H0C8 392 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-245ENST00000556958 SDCBP2Q9H190 292 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 GSX1Q9H4S2 264 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-245ENST00000556958 LRRC4Q9HBW1 653 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 OLFML3Q9NRN5 406 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 TBC1D7Q9P0N9 293 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 C5AR2Q9P296 337 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 PDP2Q9P2J9 529 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 KLQ9UEF7 1012 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 IL36AQ9UHA7 158 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 EGFL7Q9UHF1 273 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 USP25Q9UHP3 1055 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 PADI1Q9ULC6 663 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 DGKBQ9Y6T7 804 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 COL6A5A8TX70 2615 aa5.8□□□□□ -1.48
ATXN3-245ENST00000556958 A0A1W2PNR3 127 aa5.79□□□□□ -1.48
ATXN3-245ENST00000556958 ARGFXA6NJG6 315 aa5.79□□□□□ -1.48
ATXN3-245ENST00000556958 C21orf140B9A014 251 aa5.79□□□□□ -1.48
ATXN3-245ENST00000556958 SPTLC2O15270 562 aa5.79□□□□□ -1.48
ATXN3-245ENST00000556958 FANCGO15287 622 aa5.79□□□□□ -1.48
ATXN3-245ENST00000556958 EPB41L2O43491 1005 aaKnown RBP5.79□□□□□ -1.48
ATXN3-245ENST00000556958 KLHL41O60662 606 aa5.79□□□□□ -1.48
ATXN3-245ENST00000556958 LEFTY1O75610 366 aa5.79□□□□□ -1.48
ATXN3-245ENST00000556958 CEACAM4O75871 244 aa5.79□□□□□ -1.48
ATXN3-245ENST00000556958 F9P00740 461 aa5.79□□□□□ -1.48
ATXN3-245ENST00000556958 IGLV3-27P01718 113 aa5.79□□□□□ -1.48
ATXN3-245ENST00000556958 MT-ND3P03897 115 aa5.79□□□□□ -1.48
ATXN3-245ENST00000556958 MPSTP25325 297 aa5.79□□□□□ -1.48
ATXN3-245ENST00000556958 BRD2P25440 801 aaKnown RBP5.79□□□□□ -1.48
ATXN3-245ENST00000556958 GLRBP48167 497 aa5.79□□□□□ -1.48
ATXN3-245ENST00000556958 PPM1FP49593 454 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-245ENST00000556958 KRTAP10-9P60411 292 aa5.79□□□□□ -1.48
ATXN3-245ENST00000556958 GPLD1P80108 840 aa5.79□□□□□ -1.48
ATXN3-245ENST00000556958 TLE4Q04727 773 aa5.79□□□□□ -1.48
ATXN3-245ENST00000556958 CYP24A1Q07973 514 aa5.79□□□□□ -1.48
ATXN3-245ENST00000556958 RAPGEF1Q13905 1077 aa5.79□□□□□ -1.48
ATXN3-245ENST00000556958 ZNF235Q14590 738 aa5.79□□□□□ -1.48
ATXN3-245ENST00000556958 UGT8Q16880 541 aa5.79□□□□□ -1.48
ATXN3-245ENST00000556958 MIIPQ5JXC2 388 aa5.79□□□□□ -1.48
ATXN3-245ENST00000556958 RABGAP1LQ5R372 815 aa5.79□□□□□ -1.48
ATXN3-245ENST00000556958 TMCO4Q5TGY1 634 aa5.79□□□□□ -1.48
ATXN3-245ENST00000556958 TTC39BQ5VTQ0 682 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-245ENST00000556958 LYPLAL1Q5VWZ2 237 aa5.79□□□□□ -1.48
ATXN3-245ENST00000556958 SPECC1LQ69YQ0 1117 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms