RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 MMP20O60882 483 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 NEBLO76041 1014 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 H2AFZP0C0S5 128 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 HSPA9P38646 679 aaKnown RBP7.39□□□□□ -1.23
SCFD1-222ENST00000556768 PBX1P40424 430 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 SCNN1BP51168 640 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 ZNF235Q14590 738 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 LRRC14Q15048 493 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 TLR1Q15399 786 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 CYTH1Q15438 398 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 SMAD1Q15797 465 aaKnown RBP7.39□□□□□ -1.23
SCFD1-222ENST00000556768 DPYSL2Q16555 572 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 CA9Q16790 459 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 E4F1Q66K89 784 aaPredicted RBP7.39□□□□□ -1.23
SCFD1-222ENST00000556768 HGSNATQ68CP4 663 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 H2AFVQ71UI9 128 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 SRLQ86TD4 932 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 CCDC116Q8IYX3 515 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 ZNF295-AS1Q8N0V1 137 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 KCTD6Q8NC69 237 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 ATL2Q8NHH9 583 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 ZDHHC1Q8WTX9 485 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 TEKT4Q8WW24 435 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 BMFQ96LC9 184 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 CCDC42Q96M95 316 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 IL12RB2Q99665 862 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 WRAP53Q9BUR4 548 aaKnown RBP7.39□□□□□ -1.23
SCFD1-222ENST00000556768 TRIM7Q9C029 511 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 XPO4Q9C0E2 1151 aaKnown RBP7.39□□□□□ -1.23
SCFD1-222ENST00000556768 TSPY26PQ9H489 355 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 USP29Q9HBJ7 922 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 SRA1Q9HD15 236 aaKnown RBP7.39□□□□□ -1.23
SCFD1-222ENST00000556768 TOR4AQ9NXH8 423 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 UVRAGQ9P2Y5 699 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 PCDHGB7Q9Y5F8 929 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 CABIN1Q9Y6J0 2220 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 NUMA1Q14980 2115 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 IGF2RP11717 2491 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 MAP1BP46821 2468 aaKnown RBP7.39□□□□□ -1.23
SCFD1-222ENST00000556768 A0A087X0T9 212 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 RNF103O00237 685 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 SCAMP1O15126 338 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 FFAR2O15552 330 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 SIGLEC6O43699 453 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 CSF2P04141 144 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 GYPCP04921 128 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 CYP1A2P05177 515 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 KRT7P08729 469 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 FAM228BP0C875 321 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 RARAP10276 462 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 TIMP2P16035 220 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 RPIAP49247 311 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 PEX5P50542 639 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 CDH6P55285 790 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 AP1S1P61966 158 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 DNAJC3Q13217 504 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 LBRQ14739 615 aaKnown RBP7.38□□□□□ -1.23
SCFD1-222ENST00000556768 SHBQ15464 509 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 ZNF542PQ5EBM4 170 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 FAXCQ5TGI0 409 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 MARC1Q5VT66 337 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 GCNT7Q6ZNI0 430 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 POLNQ7Z5Q5 900 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 CAMK1DQ8IU85 385 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 NDUFAF2Q8N183 169 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 SLC25A45Q8N413 288 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 ATPAF2Q8N5M1 289 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 ARFGAP1Q8N6T3 406 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 NIPA2Q8N8Q9 360 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 NETO2Q8NC67 525 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 OR4C6Q8NH72 309 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 ZNF564Q8TBZ8 553 aaPredicted RBP7.38□□□□□ -1.23
SCFD1-222ENST00000556768 PSKH2Q96QS6 385 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 KLC2Q9H0B6 622 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 KCTD5Q9NXV2 234 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 NLGN3Q9NZ94 848 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 RCOR3Q9P2K3 495 aaPredicted RBP7.38□□□□□ -1.23
SCFD1-222ENST00000556768 SPASTQ9UBP0 616 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 ITM2BQ9Y287 266 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 CSNK1G3Q9Y6M4 447 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 CHD6Q8TD26 2715 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 ANKRD11Q6UB99 2663 aaPredicted RBP7.38□□□□□ -1.23
SCFD1-222ENST00000556768 CFAP69A5D8W1 941 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 PIAS2O75928 621 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 PIGNO95427 931 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 CTSEP14091 401 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 NME1P15531 152 aaKnown RBP7.38□□□□□ -1.23
SCFD1-222ENST00000556768 ACP1P24666 158 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 HNRNPH3P31942 346 aaKnown RBP7.38□□□□□ -1.23
SCFD1-222ENST00000556768 EIF4A3P38919 411 aaKnown RBP7.38□□□□□ -1.23
SCFD1-222ENST00000556768 LIG3P49916 1009 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 PPARDQ03181 441 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 DPYSQ14117 519 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 SLC18A3Q16572 532 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 TMEM52BQ4KMG9 183 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 LRRC73Q5JTD7 316 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 SLC22A18ASQ8N1D0 253 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 PDCD6IPQ8WUM4 868 aaKnown RBP7.38□□□□□ -1.23
SCFD1-222ENST00000556768 CENPTQ96BT3 561 aa7.38□□□□□ -1.23
SCFD1-222ENST00000556768 CSPG4P5Q96PW8 444 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms