RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 ZNF487B1APH4 448 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 TOR1BO14657 336 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 NEBLO76041 1014 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 CPP00450 1065 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 CKMT2P17540 419 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 LHCGRP22888 699 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 MMP13P45452 471 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 HNRNPKP61978 463 aaKnown RBP eCLIP10.38□□□□□ -0.75
SHMT2-224ENST00000556737 YPEL5P62699 121 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 SLC10A2Q12908 348 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-224ENST00000556737 IHHQ14623 411 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 MESDQ14696 234 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 LRRC14Q15048 493 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 TCEAL1Q15170 157 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 SPA17Q15506 151 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 CCDC157Q569K6 752 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 CFAP58Q5T655 872 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 KCTD16Q68DU8 428 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 ALG1LQ6GMV1 187 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 LIPIQ6XZB0 460 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 RHOT2Q8IXI1 618 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 PHACTR4Q8IZ21 702 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 PELI3Q8N2H9 469 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 GALNT15Q8N3T1 639 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 PLD5Q8N7P1 536 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 PLA2G15Q8NCC3 412 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 FATE1Q969F0 183 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 DESI2Q9BSY9 194 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 LRRC61Q9BV99 259 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 C1QTNF7Q9BXJ2 289 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 NOD2Q9HC29 1040 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 SCUBE2Q9NQ36 999 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 B4GALT6Q9UBX8 382 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 PCDHGC4Q9Y5F7 938 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 CFAP47Q6ZTR5 3102 aa10.38□□□□□ -0.75
SHMT2-224ENST00000556737 H3BM21 787 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 K7ESM1 405 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 SCAMP1O15126 338 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 AQP9O43315 295 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 FZD6O60353 706 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 RECQL5O94762 991 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-224ENST00000556737 PGLSO95336 258 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 LCA5LO95447 670 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 PCCBP05166 539 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 C1SP09871 688 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 ELFN1P0C7U0 828 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 JUNDP17535 347 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 FECHP22830 423 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 KDELR1P24390 212 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 ARHGAP25P42331 645 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 ILKQ13418 452 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 NFATC4Q14934 902 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 PTPRRQ15256 657 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 CNGA3Q16281 694 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 RALGPS1Q5JS13 557 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 MARC1Q5VT66 337 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 RAD9BQ6WBX8 426 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 PKD1L2Q7Z442 2459 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 KIAA1328Q86T90 577 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 VSIG1Q86XK7 387 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 LRRC49Q8IUZ0 686 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 TMEM139Q8IV31 216 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 FAM181AQ8N9Y4 354 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 KCTD6Q8NC69 237 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 LRRN4Q8WUT4 740 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 HDAC11Q96DB2 347 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 TBATAQ96M53 351 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 COQ10AQ96MF6 247 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 TSGA13Q96PP4 275 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 RNF157Q96PX1 679 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 MCCC1Q96RQ3 725 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-224ENST00000556737 CLPBQ9H078 707 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 NT5MQ9NPB1 228 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 TRMT1Q9NXH9 659 aaKnown RBP10.37□□□□□ -0.75
SHMT2-224ENST00000556737 DTLQ9NZJ0 730 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 APOBEC3BQ9UH17 382 aaKnown RBP10.37□□□□□ -0.75
SHMT2-224ENST00000556737 INTUQ9ULD6 942 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 OR1A2Q9Y585 309 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 CSNK1G3Q9Y6M4 447 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 MYLKQ15746 1914 aa10.37□□□□□ -0.75
SHMT2-224ENST00000556737 A0A1W2PQ67 120 aa10.36□□□□□ -0.75
SHMT2-224ENST00000556737 LRRD1A4D1F6 860 aa10.36□□□□□ -0.75
SHMT2-224ENST00000556737 NPIPB15A6NHN6 443 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-224ENST00000556737 TAF4O00268 1085 aa10.36□□□□□ -0.75
SHMT2-224ENST00000556737 MATN3O15232 486 aa10.36□□□□□ -0.75
SHMT2-224ENST00000556737 ZSCAN12O43309 604 aa10.36□□□□□ -0.75
SHMT2-224ENST00000556737 LZTS3O60299 673 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-224ENST00000556737 GCATO75600 419 aa10.36□□□□□ -0.75
SHMT2-224ENST00000556737 HEXIM1O94992 359 aaKnown RBP10.36□□□□□ -0.75
SHMT2-224ENST00000556737 KRT1P04264 644 aa10.36□□□□□ -0.75
SHMT2-224ENST00000556737 HLA-DQB2P05538 268 aa10.36□□□□□ -0.75
SHMT2-224ENST00000556737 CELA2BP08218 269 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-224ENST00000556737 CCDC175P0C221 793 aa10.36□□□□□ -0.75
SHMT2-224ENST00000556737 ALPPL2P10696 532 aa10.36□□□□□ -0.75
SHMT2-224ENST00000556737 CKMT1AP12532 417 aa10.36□□□□□ -0.75
SHMT2-224ENST00000556737 MYF5P13349 255 aa10.36□□□□□ -0.75
SHMT2-224ENST00000556737 CCNCP24863 283 aa10.36□□□□□ -0.75
SHMT2-224ENST00000556737 VIPR1P32241 457 aa10.36□□□□□ -0.75
SHMT2-224ENST00000556737 PEX5P50542 639 aa10.36□□□□□ -0.75
SHMT2-224ENST00000556737 THOP1P52888 689 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms