RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 SLC46A1Q96NT5 459 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 YIPF4Q9BSR8 244 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 ABCG4Q9H172 646 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 RSPH9Q9H1X1 276 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-239ENST00000556315 NEUROG2Q9H2A3 272 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 PABPC3Q9H361 631 aaKnown RBP5.01□□□□□ -1.61
ATXN3-239ENST00000556315 ANKMY1Q9P2S6 941 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 AGO1Q9UL18 857 aaKnown RBP5.01□□□□□ -1.61
ATXN3-239ENST00000556315 SRPK3Q9UPE1 567 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 ZKSCAN5Q9Y2L8 839 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 KIF3AQ9Y496 699 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 PCDHB1Q9Y5F3 818 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 ADAMTS9Q9P2N4 1935 aa5.01□□□□□ -1.61
ATXN3-239ENST00000556315 SHROOM3Q8TF72 1996 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 PLXND1Q9Y4D7 1925 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 TCRBV5S2A0A599 114 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 FRMD3A2A2Y4 597 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 C10orf142B7Z368 130 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 HHLA1C9JL84 531 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 TRIM38O00635 465 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 SUV39H1O43463 412 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 CSO75390 466 aaKnown RBP5□□□□□ -1.61
ATXN3-239ENST00000556315 RNASEH2AO75792 299 aaKnown RBP5□□□□□ -1.61
ATXN3-239ENST00000556315 AMY2AP04746 511 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 GP1BAP07359 652 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 HMBSP08397 361 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 FAM200BP0CF97 657 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 CKMT1AP12532 417 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 KRT10P13645 584 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 P4HA1P13674 534 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 CCDC130P13994 396 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 IDEP14735 1019 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 GOT1P17174 413 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 POLR2EP19388 210 aaKnown RBP5□□□□□ -1.61
ATXN3-239ENST00000556315 AMY2BP19961 511 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 HLA-FP30511 346 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 SLC8A1P32418 973 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 NUDT1P36639 197 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 HARS2P49590 506 aaKnown RBP5□□□□□ -1.61
ATXN3-239ENST00000556315 DUSP3P51452 185 aaPredicted RBP5□□□□□ -1.61
ATXN3-239ENST00000556315 MECP2P51608 486 aaKnown RBP5□□□□□ -1.61
ATXN3-239ENST00000556315 CASP5P51878 434 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 KIF11P52732 1056 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 AP3M2P53677 418 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 JAM2P57087 298 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 ST8SIA6P61647 398 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 SNRPFP62306 86 aaKnown RBP5□□□□□ -1.61
ATXN3-239ENST00000556315 KCNJ12Q14500 433 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 STAT4Q14765 748 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 PSMD6Q15008 389 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 SNRNP35Q16560 246 aaKnown RBP5□□□□□ -1.61
ATXN3-239ENST00000556315 ZNF667Q5HYK9 610 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 RRAGBQ5VZM2 374 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 ETV3LQ6ZN32 361 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 CCDC186Q7Z3E2 898 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 PNPLA5Q7Z6Z6 429 aaPredicted RBP5□□□□□ -1.61
ATXN3-239ENST00000556315 SCD5Q86SK9 330 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 PRPF39Q86UA1 669 aaKnown RBP5□□□□□ -1.61
ATXN3-239ENST00000556315 IQCHQ86VS3 1027 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 UNC93AQ86WB7 457 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 FAM217AQ8IXS0 508 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 ARHGAP18Q8N392 663 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 SLC25A45Q8N413 288 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 ZNF366Q8N895 744 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 DDX51Q8N8A6 666 aaKnown RBP eCLIP5□□□□□ -1.61
ATXN3-239ENST00000556315 OR2W6PQ8NHA6 318 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 NOX5Q96PH1 765 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 RBM15Q96T37 977 aaKnown RBP eCLIP5□□□□□ -1.61
ATXN3-239ENST00000556315 CGRRF1Q99675 332 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 OMDQ99983 421 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 SEMA3CQ99985 751 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 BOCQ9BWV1 1114 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 TRIM4Q9C037 500 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 USP29Q9HBJ7 922 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 SMURF1Q9HCE7 757 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 PNPLA8Q9NP80 782 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 ASCL3Q9NQ33 180 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 STARD5Q9NSY2 213 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 PANK4Q9NVE7 773 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 HSPBP1Q9NZL4 362 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 B4GALT6Q9UBX8 382 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 RASAL2Q9UJF2 1139 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 FZD4Q9ULV1 537 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 ATP23Q9Y6H3 246 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 SCN1AP35498 2009 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 HECTD1Q9ULT8 2610 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 KALRNO60229 2985 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 PTPRBP23467 1997 aa5□□□□□ -1.61
ATXN3-239ENST00000556315 CABIN1Q9Y6J0 2220 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 MYO18BQ8IUG5 2567 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 KNL1Q8NG31 2342 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 TBC1D3DA0A087WVF3 549 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 TBC1D3IA0A087WXS9 549 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 TBC1D3EA0A087X179 549 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 TBC1D3KA0A087X1G2 549 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 TARSL2A2RTX5 802 aaKnown RBP4.99□□□□□ -1.61
ATXN3-239ENST00000556315 TBC1D3FA6NER0 549 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-239ENST00000556315 TBC1D3LB9A6J9 549 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 H3BQV1 296 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 MID1O15344 667 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms