RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.96□□□□□ -0.82
PSEN1-213ENST00000555386 CPLX4Q7Z7G2 160 aa9.96□□□□□ -0.82
PSEN1-213ENST00000555386 CCDC13Q8IYE1 715 aa9.96□□□□□ -0.82
PSEN1-213ENST00000555386 CACNA2D3Q8IZS8 1091 aa9.96□□□□□ -0.82
PSEN1-213ENST00000555386 OR2AP1Q8NGE2 309 aa9.96□□□□□ -0.82
PSEN1-213ENST00000555386 SLC35B2Q8TB61 432 aa9.96□□□□□ -0.82
PSEN1-213ENST00000555386 ZNF317Q96PQ6 595 aaPredicted RBP9.96□□□□□ -0.82
PSEN1-213ENST00000555386 SELENOSQ9BQE4 189 aa9.96□□□□□ -0.82
PSEN1-213ENST00000555386 HEPHQ9BQS7 1158 aa9.96□□□□□ -0.82
PSEN1-213ENST00000555386 FAM126AQ9BYI3 521 aaPredicted RBP9.96□□□□□ -0.82
PSEN1-213ENST00000555386 NSRP1Q9H0G5 558 aaKnown RBP9.96□□□□□ -0.82
PSEN1-213ENST00000555386 ACTR5Q9H9F9 607 aaPredicted RBP9.96□□□□□ -0.82
PSEN1-213ENST00000555386 DYRK4Q9NR20 520 aa9.96□□□□□ -0.82
PSEN1-213ENST00000555386 RBM22Q9NW64 420 aaKnown RBP eCLIP9.96□□□□□ -0.82
PSEN1-213ENST00000555386 SERGEFQ9UGK8 458 aa9.96□□□□□ -0.82
PSEN1-213ENST00000555386 SEPT3Q9UH03 358 aa9.96□□□□□ -0.82
PSEN1-213ENST00000555386 TPX2Q9ULW0 747 aaKnown RBP9.96□□□□□ -0.82
PSEN1-213ENST00000555386 SHOC2Q9UQ13 582 aa9.96□□□□□ -0.82
PSEN1-213ENST00000555386 ZNF148Q9UQR1 794 aa9.96□□□□□ -0.82
PSEN1-213ENST00000555386 NCKAP1Q9Y2A7 1128 aa9.96□□□□□ -0.82
PSEN1-213ENST00000555386 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 C1QTNF3-AMACRE9PGA6 284 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 MCF2LO15068 1137 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 ACSL3O95573 720 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 ADH1BP00325 375 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 GSRP00390 522 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 CCNB1P14635 433 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 CCNCP24863 283 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 OTUD4Q01804 1114 aaKnown RBP9.95□□□□□ -0.82
PSEN1-213ENST00000555386 RPL6Q02878 288 aaKnown RBP9.95□□□□□ -0.82
PSEN1-213ENST00000555386 RAD51Q06609 339 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 RASA2Q15283 850 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 TRIP13Q15645 432 aaPredicted RBP9.95□□□□□ -0.82
PSEN1-213ENST00000555386 KYNUQ16719 465 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 FAM46CQ5VWP2 391 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 TIGD7Q6NT04 549 aaPredicted RBP9.95□□□□□ -0.82
PSEN1-213ENST00000555386 ZC3H14Q6PJT7 736 aaKnown RBP9.95□□□□□ -0.82
PSEN1-213ENST00000555386 BBS12Q6ZW61 710 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 KBTBD6Q86V97 674 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 EXOC3L1Q86VI1 746 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 VSIG1Q86XK7 387 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 TDRPQ86YL5 185 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 TMEFF1Q8IYR6 380 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 BBS5Q8N3I7 341 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 PGBD5Q8N414 524 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 AADATQ8N5Z0 425 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 ANKS4BQ8N8V4 417 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 MDM1Q8TC05 714 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 ACTL9Q8TC94 416 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 PDCD6IPQ8WUM4 868 aaKnown RBP9.95□□□□□ -0.82
PSEN1-213ENST00000555386 TFB1MQ8WVM0 346 aaKnown RBP9.95□□□□□ -0.82
PSEN1-213ENST00000555386 GAB3Q8WWW8 586 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 SNX19Q92543 992 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 ISG20Q96AZ6 181 aaKnown RBP9.95□□□□□ -0.82
PSEN1-213ENST00000555386 TOE1Q96GM8 510 aaKnown RBP9.95□□□□□ -0.82
PSEN1-213ENST00000555386 SEC16BQ96JE7 1060 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 CABS1Q96KC9 395 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 KLHL32Q96NJ5 620 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 AGAP3Q96P47 875 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 RBM15Q96T37 977 aaKnown RBP eCLIP9.95□□□□□ -0.82
PSEN1-213ENST00000555386 PHOX2BQ99453 314 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 GPR174Q9BXC1 333 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 FBRSQ9HAH7 460 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 SCUBE2Q9NQ36 999 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 MBD1Q9UIS9 605 aaPredicted RBP9.95□□□□□ -0.82
PSEN1-213ENST00000555386 DNPEPQ9ULA0 475 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 PPM1HQ9ULR3 514 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 PCDHGA2Q9Y5H1 932 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 WASF2Q9Y6W5 498 aa9.95□□□□□ -0.82
PSEN1-213ENST00000555386 PLXND1Q9Y4D7 1925 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 RIF1Q5UIP0 2472 aaKnown RBP9.94□□□□□ -0.82
PSEN1-213ENST00000555386 ZFHX2Q9C0A1 2572 aaPredicted RBP9.94□□□□□ -0.82
PSEN1-213ENST00000555386 IGHV1OR15-9A0A0B4J2B8 117 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 SMIM23A6NLE4 172 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 APOC4-APOC2K7ER74 178 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 MATN3O15232 486 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 ZNF217O75362 1048 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 POP4O95707 220 aaKnown RBP9.94□□□□□ -0.82
PSEN1-213ENST00000555386 PEX11BO96011 259 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 APOC2P02655 101 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 PRNPP04156 253 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 PRKCGP05129 697 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 C5AR1P21730 350 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 CD6P30203 668 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 HOXA6P31267 233 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 ACSL1P33121 698 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 P2RY2P41231 377 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 MAGEA4P43358 317 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 SLCO1A2P46721 670 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 NR2C2P49116 596 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 DHPSP49366 369 aaPredicted RBP9.94□□□□□ -0.82
PSEN1-213ENST00000555386 RENBPP51606 427 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 EIF3EP60228 445 aaKnown RBP9.94□□□□□ -0.82
PSEN1-213ENST00000555386 SEMG2Q02383 582 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 PPIDQ08752 370 aaKnown RBP9.94□□□□□ -0.82
PSEN1-213ENST00000555386 CNTN1Q12860 1018 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 ZBTB17Q13105 803 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 ITIH4Q14624 930 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 RFTN1Q14699 578 aaPredicted RBP9.94□□□□□ -0.82
PSEN1-213ENST00000555386 LONRF1Q17RB8 773 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms