RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 RNF10Q8N5U6 811 aaKnown RBP12.17□□□□□ -0.46
SRP54-206ENST00000555317 LRRC57Q8N9N7 239 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 OR13H1Q8NG92 308 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 VOPP1Q96AW1 172 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 HAUS1Q96CS2 278 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 OLFM3Q96PB7 478 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 HEMGNQ9BXL5 484 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 TRIM10Q9UDY6 481 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 PHTF1Q9UMS5 762 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 GUCA1BQ9UMX6 200 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 COQ6Q9Y2Z9 468 aa12.17□□□□□ -0.46
SRP54-206ENST00000555317 GOLGA6L9A6NEM1 432 aa12.16□□□□□ -0.46
SRP54-206ENST00000555317 RAD51BO15315 384 aa12.16□□□□□ -0.46
SRP54-206ENST00000555317 MTSS1O43312 755 aa12.16□□□□□ -0.46
SRP54-206ENST00000555317 PCDHGA12O60330 932 aa12.16□□□□□ -0.46
SRP54-206ENST00000555317 PGLSO95336 258 aa12.16□□□□□ -0.46
SRP54-206ENST00000555317 SEMG2Q02383 582 aa12.16□□□□□ -0.46
SRP54-206ENST00000555317 PDE1CQ14123 709 aaPredicted RBP12.16□□□□□ -0.46
SRP54-206ENST00000555317 PTK2BQ14289 1009 aa12.16□□□□□ -0.46
SRP54-206ENST00000555317 ACOX1Q15067 660 aa12.16□□□□□ -0.46
SRP54-206ENST00000555317 TAZQ16635 292 aa12.16□□□□□ -0.46
SRP54-206ENST00000555317 HS1BP3Q53T59 392 aa12.16□□□□□ -0.46
SRP54-206ENST00000555317 PRAMEF14Q5SWL7 426 aa12.16□□□□□ -0.46
SRP54-206ENST00000555317 ALG1LQ6GMV1 187 aa12.16□□□□□ -0.46
SRP54-206ENST00000555317 ABI3BPQ7Z7G0 1075 aa12.16□□□□□ -0.46
SRP54-206ENST00000555317 PIP4P1Q86T03 277 aa12.16□□□□□ -0.46
SRP54-206ENST00000555317 ZC3H18Q86VM9 953 aaKnown RBP12.16□□□□□ -0.46
SRP54-206ENST00000555317 RHBDD1Q8TEB9 315 aa12.16□□□□□ -0.46
SRP54-206ENST00000555317 AGAP3Q96P47 875 aa12.16□□□□□ -0.46
SRP54-206ENST00000555317 ALS2CR12Q96Q35 445 aa12.16□□□□□ -0.46
SRP54-206ENST00000555317 CEP41Q9BYV8 373 aa12.16□□□□□ -0.46
SRP54-206ENST00000555317 B4GALT6Q9UBX8 382 aa12.16□□□□□ -0.46
SRP54-206ENST00000555317 DNPEPQ9ULA0 475 aa12.16□□□□□ -0.46
SRP54-206ENST00000555317 ADGRG1Q9Y653 693 aa12.16□□□□□ -0.46
SRP54-206ENST00000555317 CFAP69A5D8W1 941 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 POM121BA6NF01 834 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 A8MX80 341 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 HACD1B0YJ81 288 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 H3BM21 787 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 H7C0C1 242 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 APOC4-APOC2K7ER74 178 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 TOR1BO14657 336 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 GIPC1O14908 333 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 STK10O94804 968 aaKnown RBP12.15□□□□□ -0.46
SRP54-206ENST00000555317 TJP3O95049 919 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 FTCDO95954 541 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 APOC2P02655 101 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 PCCBP05166 539 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 PECAM1P16284 738 aaPredicted RBP12.15□□□□□ -0.46
SRP54-206ENST00000555317 HTR1BP28222 390 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 EPHA8P29322 1005 aaPredicted RBP12.15□□□□□ -0.46
SRP54-206ENST00000555317 VIPR1P32241 457 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 PTPN7P35236 360 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 CD86P42081 329 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 ATP5OP48047 213 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 SIM1P81133 766 aaPredicted RBP12.15□□□□□ -0.46
SRP54-206ENST00000555317 ZBTB17Q13105 803 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 PRKD1Q15139 912 aaPredicted RBP12.15□□□□□ -0.46
SRP54-206ENST00000555317 IRF4Q15306 451 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 TRIP6Q15654 476 aaKnown RBP12.15□□□□□ -0.46
SRP54-206ENST00000555317 DENND2CQ68D51 928 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 BBS12Q6ZW61 710 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 NT5DC3Q86UY8 548 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 PARGQ86W56 976 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 SPATS2Q86XZ4 545 aaKnown RBP12.15□□□□□ -0.46
SRP54-206ENST00000555317 LRRC8AQ8IWT6 810 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 SPOCK2Q92563 424 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 KLF6Q99612 283 aaPredicted RBP12.15□□□□□ -0.46
SRP54-206ENST00000555317 IL12RB2Q99665 862 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 CDC6Q99741 560 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 ADGRE3Q9BY15 652 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 OSBPL8Q9BZF1 889 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 DNAJC28Q9NX36 388 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 SAE1Q9UBE0 346 aaPredicted RBP12.15□□□□□ -0.46
SRP54-206ENST00000555317 FTSJ1Q9UET6 329 aa12.15□□□□□ -0.46
SRP54-206ENST00000555317 CHD8Q9HCK8 2581 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 SPAARA0A1B0GVQ0 90 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 GOLGA6CA6NDK9 693 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 GOLGA6BA6NDN3 693 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 ZNF189O75820 626 aaPredicted RBP12.14□□□□□ -0.47
SRP54-206ENST00000555317 RECQL5O94762 991 aaPredicted RBP12.14□□□□□ -0.47
SRP54-206ENST00000555317 GOLGA6DP0CG33 693 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 CTPS1P17812 591 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 IGFALSP35858 605 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 RXRGP48443 463 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 RPL26P61254 145 aaKnown RBP12.14□□□□□ -0.47
SRP54-206ENST00000555317 YPEL5P62699 121 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 RALGDSQ12967 914 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 SEL1L2Q5TEA6 688 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 CCDC70Q6NSX1 233 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 LIPIQ6XZB0 460 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 B4GALNT4Q76KP1 1039 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 GATAD2AQ86YP4 633 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 CDKL3Q8IVW4 592 aaPredicted RBP12.14□□□□□ -0.47
SRP54-206ENST00000555317 TP53I13Q8NBR0 393 aaPredicted RBP12.14□□□□□ -0.47
SRP54-206ENST00000555317 LPCAT1Q8NF37 534 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 ATL2Q8NHH9 583 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 CENPTQ96BT3 561 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 NUS1Q96E22 293 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 IFT43Q96FT9 208 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms