RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 CD59P13987 128 aa12.42□□□□□ -0.42
SYNE2-214ENST00000554928 RBL1P28749 1068 aa12.42□□□□□ -0.42
SYNE2-214ENST00000554928 AKT2P31751 481 aa12.42□□□□□ -0.42
SYNE2-214ENST00000554928 IGFALSP35858 605 aa12.42□□□□□ -0.42
SYNE2-214ENST00000554928 NR2C2P49116 596 aa12.42□□□□□ -0.42
SYNE2-214ENST00000554928 ATXN3P54252 364 aaPredicted RBP12.42□□□□□ -0.42
SYNE2-214ENST00000554928 NXPH1P58417 271 aa12.42□□□□□ -0.42
SYNE2-214ENST00000554928 TEAD4Q15561 434 aa12.42□□□□□ -0.42
SYNE2-214ENST00000554928 CNGA3Q16281 694 aa12.42□□□□□ -0.42
SYNE2-214ENST00000554928 MEI1Q5TIA1 1274 aa12.42□□□□□ -0.42
SYNE2-214ENST00000554928 LIPIQ6XZB0 460 aa12.42□□□□□ -0.42
SYNE2-214ENST00000554928 RFLNAQ6ZTI6 216 aa12.42□□□□□ -0.42
SYNE2-214ENST00000554928 DPPA4Q7L190 304 aa12.42□□□□□ -0.42
SYNE2-214ENST00000554928 ABI3BPQ7Z7G0 1075 aa12.42□□□□□ -0.42
SYNE2-214ENST00000554928 REXO1L1PQ8IX06 675 aa12.42□□□□□ -0.42
SYNE2-214ENST00000554928 TP53I13Q8NBR0 393 aaPredicted RBP12.42□□□□□ -0.42
SYNE2-214ENST00000554928 CXorf40AQ8TE69 158 aa12.42□□□□□ -0.42
SYNE2-214ENST00000554928 CENPTQ96BT3 561 aa12.42□□□□□ -0.42
SYNE2-214ENST00000554928 CAMK1GQ96NX5 476 aa12.42□□□□□ -0.42
SYNE2-214ENST00000554928 RBM15Q96T37 977 aaKnown RBP eCLIP12.42□□□□□ -0.42
SYNE2-214ENST00000554928 TDRD1Q9BXT4 1180 aaKnown RBP12.42□□□□□ -0.42
SYNE2-214ENST00000554928 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.42□□□□□ -0.42
SYNE2-214ENST00000554928 SPTBN4Q9H254 2564 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 ANKRD36A6QL64 1941 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 USP27XA6NNY8 438 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 H7C0C1 242 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 NEBLO76041 1014 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 TM7SF2O76062 418 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 MT-CYBP00156 380 aaPredicted RBP12.41□□□□□ -0.42
SYNE2-214ENST00000554928 THEGLP0DJG4 465 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 NFKB1P19838 968 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 ATP5OP48047 213 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 C21orf59P57076 290 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 KLF1Q13351 362 aaPredicted RBP12.41□□□□□ -0.42
SYNE2-214ENST00000554928 STAT4Q14765 748 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 IRF4Q15306 451 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 KCTD19Q17RG1 926 aaPredicted RBP12.41□□□□□ -0.42
SYNE2-214ENST00000554928 ZNF423Q2M1K9 1284 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 WSCD2Q2TBF2 565 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 TEX44Q53QW1 395 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 SLC45A4Q5BKX6 768 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 RALGPS1Q5JS13 557 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 ARMC12Q5T9G4 340 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 CCDC181Q5TID7 509 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 ERAP2Q6P179 960 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 KDELC2Q7Z4H8 507 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 ZNF567Q8N184 647 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 UBL4BQ8N7F7 174 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 PAF1Q8N7H5 531 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 MFSD2AQ8NA29 543 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 PLA2G15Q8NCC3 412 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 TADA1Q96BN2 335 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 IMP4Q96G21 291 aaKnown RBP12.41□□□□□ -0.42
SYNE2-214ENST00000554928 TEKT5Q96M29 485 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 GORASP1Q9BQQ3 440 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 GLOD4Q9HC38 313 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 PLSCR2Q9NRY7 297 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 DNAAF2Q9NVR5 837 aaKnown RBP12.41□□□□□ -0.42
SYNE2-214ENST00000554928 UBP1Q9NZI7 540 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 AMACRQ9UHK6 382 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 PNMA8BQ9ULN7 279 aaPredicted RBP12.41□□□□□ -0.42
SYNE2-214ENST00000554928 PYCARDQ9ULZ3 195 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 BTBD3Q9Y2F9 522 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 EFR3BQ9Y2G0 817 aa12.41□□□□□ -0.42
SYNE2-214ENST00000554928 SH3BP5O60239 455 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 OPHN1O60890 802 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 RECQL5O94762 991 aaPredicted RBP12.4□□□□□ -0.42
SYNE2-214ENST00000554928 PTMAP06454 111 aaKnown RBP12.4□□□□□ -0.42
SYNE2-214ENST00000554928 VIPR1P32241 457 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 HNF1BP35680 557 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 NUDT1P36639 197 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 SUOXP51687 545 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 EIF3EP60228 445 aaKnown RBP12.4□□□□□ -0.42
SYNE2-214ENST00000554928 ELP6Q0PNE2 266 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 BNIP3Q12983 259 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 SGCGQ13326 291 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 GALNT3Q14435 633 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 PCSK7Q16549 785 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 QPCTQ16769 361 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 ZNF542PQ5EBM4 170 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 DENND2CQ68D51 928 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 KCTD16Q68DU8 428 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 Q6ZSR6 202 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 HSD11B1LQ7Z5J1 315 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 PTAR1Q7Z6K3 402 aaPredicted RBP12.4□□□□□ -0.42
SYNE2-214ENST00000554928 GATAD2AQ86YP4 633 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 DEFB124Q8NES8 71 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 LPCAT1Q8NF37 534 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 HTR3CQ8WXA8 447 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 ASB12Q8WXK4 309 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 ATG4AQ8WYN0 398 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 KLHDC7BQ96G42 594 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 OXNAD1Q96HP4 312 aaPredicted RBP12.4□□□□□ -0.42
SYNE2-214ENST00000554928 LENG8Q96PV6 779 aaPredicted RBP12.4□□□□□ -0.42
SYNE2-214ENST00000554928 MCCC1Q96RQ3 725 aaPredicted RBP12.4□□□□□ -0.42
SYNE2-214ENST00000554928 TRIB3Q96RU7 358 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 RTKNQ9BST9 563 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 TLR10Q9BXR5 811 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 ZDHHC5Q9C0B5 715 aa12.4□□□□□ -0.42
SYNE2-214ENST00000554928 SLC25A51Q9H1U9 297 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms