RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 NFKBIAP25963 317 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 CYLC1P35663 651 aaPredicted RBP7.57□□□□□ -1.2
LINC00640-201ENST00000554409 MAGEA1P43355 309 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 PEX5P50542 639 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 HNRNPKP61978 463 aaKnown RBP eCLIP7.57□□□□□ -1.2
LINC00640-201ENST00000554409 RALGDSQ12967 914 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 MTM1Q13496 603 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 PDE1CQ14123 709 aaPredicted RBP7.57□□□□□ -1.2
LINC00640-201ENST00000554409 PTK2BQ14289 1009 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 LRRC14Q15048 493 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 IRF4Q15306 451 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 SLC9A4Q6AI14 798 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 LIPIQ6XZB0 460 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 MACC1Q6ZN28 852 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 DPPA4Q7L190 304 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 GAS2L3Q86XJ1 694 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 SLC25A45Q8N413 288 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 CHCHD4Q8N4Q1 142 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 EID2Q8N6I1 236 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 PLD5Q8N7P1 536 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 OR4C6Q8NH72 309 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 RAPGEF5Q92565 580 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 CNDP2Q96KP4 475 aaKnown RBP7.57□□□□□ -1.2
LINC00640-201ENST00000554409 RNF157Q96PX1 679 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 ANP32EQ9BTT0 268 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 WRAP53Q9BUR4 548 aaKnown RBP7.57□□□□□ -1.2
LINC00640-201ENST00000554409 NOD2Q9HC29 1040 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 MBNL1Q9NR56 388 aaKnown RBP7.57□□□□□ -1.2
LINC00640-201ENST00000554409 DDX56Q9NY93 547 aaKnown RBP7.57□□□□□ -1.2
LINC00640-201ENST00000554409 NLGN3Q9NZ94 848 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 DTLQ9NZJ0 730 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 KLK13Q9UKR3 277 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 PHTF1Q9UMS5 762 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 PPIL1Q9Y3C6 166 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 KNL1Q8NG31 2342 aa7.57□□□□□ -1.2
LINC00640-201ENST00000554409 TDRD6O60522 2096 aaKnown RBP7.56□□□□□ -1.2
LINC00640-201ENST00000554409 TMEM8BA6NDV4 472 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 NEMP2A6NFY4 417 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 SCAMP1O15126 338 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 PSTPIP1O43586 416 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 FZD6O60353 706 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 SDC3O75056 442 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 RFPL3O75679 317 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 PGLSO95336 258 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 CPP00450 1065 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 PROS1P07225 676 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 ELFN1P0C7U0 828 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 GIMD1P0DJR0 217 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 CCNB1P14635 433 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 ZFXP17010 805 aaPredicted RBP7.56□□□□□ -1.2
LINC00640-201ENST00000554409 CKMT2P17540 419 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 COMTP21964 271 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 ACP1P24666 158 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 ACADVLP49748 655 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 LIG3P49916 1009 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 THOP1P52888 689 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 MAXP61244 160 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 GBE1Q04446 702 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 PPIDQ08752 370 aaKnown RBP7.56□□□□□ -1.2
LINC00640-201ENST00000554409 SLC10A2Q12908 348 aaPredicted RBP7.56□□□□□ -1.2
LINC00640-201ENST00000554409 TRAF2Q12933 501 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 EIF2B5Q13144 721 aaKnown RBP7.56□□□□□ -1.2
LINC00640-201ENST00000554409 ZNF211Q13398 564 aaPredicted RBP7.56□□□□□ -1.2
LINC00640-201ENST00000554409 ILKQ13418 452 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 SPA17Q15506 151 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 SMAD1Q15797 465 aaKnown RBP7.56□□□□□ -1.2
LINC00640-201ENST00000554409 TAZQ16635 292 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 WSCD2Q2TBF2 565 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 TPRG1LQ5T0D9 272 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 ZFYVE27Q5T4F4 411 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 C11orf63Q6NUN7 778 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 UNQ6494/PRO21346Q6UXR6 183 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 TMPRSS7Q7RTY8 843 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 RHOT1Q8IXI2 618 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 CCDC13Q8IYE1 715 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 GALNT15Q8N3T1 639 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 PNPLA1Q8N8W4 532 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 FAM181AQ8N9Y4 354 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 ZNF548Q8NEK5 533 aaPredicted RBP7.56□□□□□ -1.2
LINC00640-201ENST00000554409 BTN2A2Q8WVV5 523 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 CALR3Q96L12 384 aaKnown RBP7.56□□□□□ -1.2
LINC00640-201ENST00000554409 ZNF830Q96NB3 372 aaPredicted RBP7.56□□□□□ -1.2
LINC00640-201ENST00000554409 OLFM3Q96PB7 478 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 SPSB2Q99619 263 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 POLR1EQ9GZS1 481 aaKnown RBP7.56□□□□□ -1.2
LINC00640-201ENST00000554409 NT5MQ9NPB1 228 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 LUC7LQ9NQ29 371 aaKnown RBP7.56□□□□□ -1.2
LINC00640-201ENST00000554409 HAUS2Q9NVX0 235 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 UCKL1Q9NWZ5 548 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 DNAJC28Q9NX36 388 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 KCTD5Q9NXV2 234 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 KLF15Q9UIH9 416 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 COQ6Q9Y2Z9 468 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 PCDHGC4Q9Y5F7 938 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 PCDHA13Q9Y5I0 950 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 CSNK1G3Q9Y6M4 447 aa7.56□□□□□ -1.2
LINC00640-201ENST00000554409 ARID1BQ8NFD5 2236 aaPredicted RBP7.56□□□□□ -1.2
LINC00640-201ENST00000554409 TTC24A2A3L6 582 aaPredicted RBP7.55□□□□□ -1.2
LINC00640-201ENST00000554409 BTNL10A8MVZ5 291 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 C1QTNF9BB2RNN3 333 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms