RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 GABBR2O75899 941 aa17.06■□□□□ 0.32
NEK9-204ENST00000554258 LSM8O95777 96 aaKnown RBP17.06■□□□□ 0.32
NEK9-204ENST00000554258 GLB1P16278 677 aa17.06■□□□□ 0.32
NEK9-204ENST00000554258 BLKP51451 505 aa17.06■□□□□ 0.32
NEK9-204ENST00000554258 NEK3P51956 506 aa17.06■□□□□ 0.32
NEK9-204ENST00000554258 ARHGEF7Q14155 803 aa17.06■□□□□ 0.32
NEK9-204ENST00000554258 TSR1Q2NL82 804 aaKnown RBP17.06■□□□□ 0.32
NEK9-204ENST00000554258 ZXDCQ2QGD7 858 aaPredicted RBP17.06■□□□□ 0.32
NEK9-204ENST00000554258 ASTE1Q2TB18 679 aaPredicted RBP17.06■□□□□ 0.32
NEK9-204ENST00000554258 TAF3Q5VWG9 929 aa17.06■□□□□ 0.32
NEK9-204ENST00000554258 MACC1Q6ZN28 852 aa17.06■□□□□ 0.32
NEK9-204ENST00000554258 PIM3Q86V86 326 aa17.06■□□□□ 0.32
NEK9-204ENST00000554258 GKN2Q86XP6 184 aa17.06■□□□□ 0.32
NEK9-204ENST00000554258 TP53INP2Q8IXH6 220 aa17.06■□□□□ 0.32
NEK9-204ENST00000554258 UNC5BQ8IZJ1 945 aa17.06■□□□□ 0.32
NEK9-204ENST00000554258 SH2D3CQ8N5H7 860 aa17.06■□□□□ 0.32
NEK9-204ENST00000554258 TTC13Q8NBP0 860 aa17.06■□□□□ 0.32
NEK9-204ENST00000554258 SPC24Q8NBT2 197 aa17.06■□□□□ 0.32
NEK9-204ENST00000554258 DENND6BQ8NEG7 585 aa17.06■□□□□ 0.32
NEK9-204ENST00000554258 GRIN3AQ8TCU5 1115 aa17.06■□□□□ 0.32
NEK9-204ENST00000554258 PPP1R16AQ96I34 528 aa17.06■□□□□ 0.32
NEK9-204ENST00000554258 HSFY1Q96LI6 401 aa17.06■□□□□ 0.32
NEK9-204ENST00000554258 DDA1Q9BW61 102 aa17.06■□□□□ 0.32
NEK9-204ENST00000554258 ASPSCR1Q9BZE9 553 aa17.06■□□□□ 0.32
NEK9-204ENST00000554258 LOC101059948A0A1B0GTJ6 334 aa17.05■□□□□ 0.32
NEK9-204ENST00000554258 SSU72P8A0A1W2PR75 194 aa17.05■□□□□ 0.32
NEK9-204ENST00000554258 IGLON5A6NGN9 336 aa17.05■□□□□ 0.32
NEK9-204ENST00000554258 M0QYV0 167 aa17.05■□□□□ 0.32
NEK9-204ENST00000554258 RNF103O00237 685 aa17.05■□□□□ 0.32
NEK9-204ENST00000554258 DDX3XO00571 662 aaKnown RBP eCLIP17.05■□□□□ 0.322e-12■■■□□ 15.8
NEK9-204ENST00000554258 CPNE6O95741 557 aa17.05■□□□□ 0.32
NEK9-204ENST00000554258 UNGP13051 313 aaPredicted RBP17.05■□□□□ 0.32
NEK9-204ENST00000554258 PNLIPP16233 465 aa17.05■□□□□ 0.32
NEK9-204ENST00000554258 NOMO3P69849 1222 aa17.05■□□□□ 0.32
NEK9-204ENST00000554258 CERCAMQ5T4B2 595 aa17.05■□□□□ 0.32
NEK9-204ENST00000554258 RAP1GAP2Q684P5 730 aa17.05■□□□□ 0.32
NEK9-204ENST00000554258 PMF1Q6P1K2 205 aa17.05■□□□□ 0.32
NEK9-204ENST00000554258 TMEM110Q86TL2 294 aa17.05■□□□□ 0.32
NEK9-204ENST00000554258 ZSCAN30Q86W11 494 aa17.05■□□□□ 0.32
NEK9-204ENST00000554258 CHSY1Q86X52 802 aa17.05■□□□□ 0.32
NEK9-204ENST00000554258 HID1Q8IV36 788 aa17.05■□□□□ 0.32
NEK9-204ENST00000554258 MCEMP1Q8IX19 187 aa17.05■□□□□ 0.32
NEK9-204ENST00000554258 NLGN4XQ8N0W4 816 aa17.05■□□□□ 0.32
NEK9-204ENST00000554258 CCAR2Q8N163 923 aaKnown RBP17.05■□□□□ 0.32
NEK9-204ENST00000554258 TMEM35BQ8NCS4 154 aa17.05■□□□□ 0.32
NEK9-204ENST00000554258 NLGN4YQ8NFZ3 816 aaPredicted RBP17.05■□□□□ 0.32
NEK9-204ENST00000554258 OR2A12Q8NGT7 310 aa17.05■□□□□ 0.32
NEK9-204ENST00000554258 PPP1R9BQ96SB3 815 aa17.05■□□□□ 0.32
NEK9-204ENST00000554258 C1QTNF2Q9BXJ5 285 aa17.05■□□□□ 0.32
NEK9-204ENST00000554258 ZNHIT6Q9NWK9 470 aaKnown RBP17.05■□□□□ 0.32
NEK9-204ENST00000554258 PILRAQ9UKJ1 303 aa17.05■□□□□ 0.32
NEK9-204ENST00000554258 ITGB1BP2Q9UKP3 347 aa17.05■□□□□ 0.32
NEK9-204ENST00000554258 SLC5A6Q9Y289 635 aa17.05■□□□□ 0.32
NEK9-204ENST00000554258 FADS3Q9Y5Q0 445 aa17.05■□□□□ 0.32
NEK9-204ENST00000554258 CHD5Q8TDI0 1954 aa17.05■□□□□ 0.32
NEK9-204ENST00000554258 LRP4O75096 1905 aa17.05■□□□□ 0.32
NEK9-204ENST00000554258 RFPL1O75677 317 aa17.04■□□□□ 0.32
NEK9-204ENST00000554258 PDGFAP04085 211 aa17.04■□□□□ 0.32
NEK9-204ENST00000554258 PLEKP08567 350 aaPredicted RBP17.04■□□□□ 0.32
NEK9-204ENST00000554258 GZMAP12544 262 aa17.04■□□□□ 0.32
NEK9-204ENST00000554258 ADRB3P13945 408 aa17.04■□□□□ 0.32
NEK9-204ENST00000554258 TACR2P21452 398 aa17.04■□□□□ 0.32
NEK9-204ENST00000554258 TNFAIP3P21580 790 aa17.04■□□□□ 0.32
NEK9-204ENST00000554258 MAP4P27816 1152 aaKnown RBP17.04■□□□□ 0.32
NEK9-204ENST00000554258 HK3P52790 923 aa17.04■□□□□ 0.32
NEK9-204ENST00000554258 GSDMDP57764 484 aa17.04■□□□□ 0.32
NEK9-204ENST00000554258 YPEL5P62699 121 aa17.04■□□□□ 0.32
NEK9-204ENST00000554258 CLEC16AQ2KHT3 1053 aa17.04■□□□□ 0.32
NEK9-204ENST00000554258 CRTC2Q53ET0 693 aaPredicted RBP17.04■□□□□ 0.32
NEK9-204ENST00000554258 ARSIQ5FYB1 569 aa17.04■□□□□ 0.32
NEK9-204ENST00000554258 CIR1Q86X95 450 aaPredicted RBP17.04■□□□□ 0.32
NEK9-204ENST00000554258 SCML4Q8N228 414 aa17.04■□□□□ 0.32
NEK9-204ENST00000554258 PIAS4Q8N2W9 510 aaPredicted RBP17.04■□□□□ 0.32
NEK9-204ENST00000554258 GPR156Q8NFN8 814 aa17.04■□□□□ 0.32
NEK9-204ENST00000554258 CHP1Q99653 195 aa17.04■□□□□ 0.32
NEK9-204ENST00000554258 SLC39A1Q9NY26 324 aa17.04■□□□□ 0.32
NEK9-204ENST00000554258 MAP10Q9P2G4 905 aa17.04■□□□□ 0.32
NEK9-204ENST00000554258 LRIT1Q9P2V4 623 aa17.04■□□□□ 0.32
NEK9-204ENST00000554258 XPO7Q9UIA9 1087 aaKnown RBP17.04■□□□□ 0.32
NEK9-204ENST00000554258 TLK1Q9UKI8 766 aa17.04■□□□□ 0.32
NEK9-204ENST00000554258 NENFQ9UMX5 172 aa17.04■□□□□ 0.32
NEK9-204ENST00000554258 ENTPD4Q9Y227 616 aa17.04■□□□□ 0.32
NEK9-204ENST00000554258 EIF4A3P38919 411 aaKnown RBP17.03■□□□□ 0.32
NEK9-204ENST00000554258 DAOAP59103 153 aa17.03■□□□□ 0.32
NEK9-204ENST00000554258 INPP5JQ15735 1006 aaPredicted RBP17.03■□□□□ 0.32
NEK9-204ENST00000554258 AMZ1Q400G9 498 aa17.03■□□□□ 0.32
NEK9-204ENST00000554258 KDELC2Q7Z4H8 507 aa17.03■□□□□ 0.32
NEK9-204ENST00000554258 TMEM139Q8IV31 216 aa17.03■□□□□ 0.32
NEK9-204ENST00000554258 CHST14Q8NCH0 376 aa17.03■□□□□ 0.32
NEK9-204ENST00000554258 CYP4F12Q9HCS2 524 aa17.03■□□□□ 0.32
NEK9-204ENST00000554258 CNGB3Q9NQW8 809 aa17.03■□□□□ 0.32
NEK9-204ENST00000554258 IL36AQ9UHA7 158 aa17.03■□□□□ 0.32
NEK9-204ENST00000554258 TLR6Q9Y2C9 796 aa17.03■□□□□ 0.32
NEK9-204ENST00000554258 DCHS2Q6V1P9 2916 aa17.02■□□□□ 0.32
NEK9-204ENST00000554258 GOLGA6L6A8MZA4 724 aa17.02■□□□□ 0.32
NEK9-204ENST00000554258 F5H5T6 163 aa17.02■□□□□ 0.32
NEK9-204ENST00000554258 SRCP12931 536 aa17.02■□□□□ 0.32
NEK9-204ENST00000554258 LCP1P13796 627 aa17.02■□□□□ 0.32
NEK9-204ENST00000554258 IGFALSP35858 605 aa17.02■□□□□ 0.32
NEK9-204ENST00000554258 ACADSBP45954 432 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms