RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 KRBA2Q6ZNG9 492 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 PARS2Q7L3T8 475 aaKnown RBP7.41□□□□□ -1.22
ATXN3-219ENST00000553488 C14orf80Q86SX3 495 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 TMEM110Q86TL2 294 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 ARHGEF19Q8IW93 802 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 SULF2Q8IWU5 870 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 ZNF683Q8IZ20 524 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 PPM1KQ8N3J5 372 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 DCAF4L2Q8NA75 395 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 GRIN3AQ8TCU5 1115 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 EXTL1Q92935 676 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 CCDC47Q96A33 483 aaKnown RBP7.41□□□□□ -1.22
ATXN3-219ENST00000553488 VOPP1Q96AW1 172 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 SGF29Q96ES7 293 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 TBATAQ96M53 351 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 KREMEN1Q96MU8 473 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 RPRD1AQ96P16 312 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-219ENST00000553488 NT5C1BQ96P26 610 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 SEMA3CQ99985 751 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 CCDC3Q9BQI4 270 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 LRRC61Q9BV99 259 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 SLC17A9Q9BYT1 436 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 GOLPH3LQ9H4A5 285 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 FAM204AQ9H8W3 233 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 ST7Q9NRC1 585 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 RAD18Q9NS91 495 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.41□□□□□ -1.22
ATXN3-219ENST00000553488 CFAP45Q9UL16 551 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 VANGL2Q9ULK5 521 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 CNTN6Q9UQ52 1028 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 FADS3Q9Y5Q0 445 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 HS3ST4Q9Y661 456 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 LRBAP50851 2863 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 CLEC18AA5D8T8 446 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 ANKRD33BA6NCL7 494 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 TRIM49BA6NDI0 452 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 D6RAR5 112 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 LMO7DNF2Z398 122 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 PLD2O14939 933 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 AP1G1O43747 822 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 CLDN11O75508 207 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 LEFTY1O75610 366 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 FAM87AP0C7U9 286 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 LIPCP11150 499 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 SLC2A3P11169 496 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 WT1P19544 449 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-219ENST00000553488 CCR1P32246 355 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 UGT1A5P35504 534 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 PRCPP42785 496 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 CDH4P55283 916 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 RPS21P63220 83 aaKnown RBP7.4□□□□□ -1.22
ATXN3-219ENST00000553488 NUCB2P80303 420 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 EIF3IQ13347 325 aaKnown RBP7.4□□□□□ -1.22
ATXN3-219ENST00000553488 PDCLQ13371 301 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 SPIDRQ14159 915 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 ALFQ53S48 1182 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 PAOXQ6QHF9 649 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 CLEC18BQ6UXF7 455 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 LINGO4Q6UY18 593 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 ZNF574Q6ZN55 896 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-219ENST00000553488 DPY19L3Q6ZPD9 716 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 DEFB106AQ8N104 65 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 ATP11CQ8NB49 1132 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 CLEC18CQ8NCF0 446 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 DENND6BQ8NEG7 585 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 WDR48Q8TAF3 677 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 LMX1AQ8TE12 382 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 HTR3CQ8WXA8 447 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 NAT6Q93015 286 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 PPP1R16AQ96I34 528 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 CCDC114Q96M63 670 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 FRMD6Q96NE9 622 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 LENG8Q96PV6 779 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-219ENST00000553488 PPP1R9BQ96SB3 815 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 CLPBQ9H078 707 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 TNKS2Q9H2K2 1166 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 THAP9Q9H5L6 903 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 METTL14Q9HCE5 456 aaKnown RBP7.4□□□□□ -1.22
ATXN3-219ENST00000553488 ANLNQ9NQW6 1124 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 DYRK4Q9NR20 520 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 DDIT4Q9NX09 232 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 ANKMY1Q9P2S6 941 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 ZNF212Q9UDV6 495 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 APOBEC3BQ9UH17 382 aaKnown RBP7.4□□□□□ -1.22
ATXN3-219ENST00000553488 ARMCX3Q9UH62 379 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-219ENST00000553488 IL36AQ9UHA7 158 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 GGT7Q9UJ14 662 aa7.4□□□□□ -1.22
ATXN3-219ENST00000553488 CREBBPQ92793 2442 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 SYNJ2BP-COX16A0A087WUM0 186 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 A0A0D9SEW6 157 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 A0A1W2PQM1 296 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 HSF2BPO75031 334 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 PAGE1O75459 146 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 ZMPSTE24O75844 475 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 PAK4O96013 591 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-219ENST00000553488 AFPP02771 609 aaKnown RBP7.39□□□□□ -1.23
ATXN3-219ENST00000553488 RHOCP08134 193 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 GLI1P08151 1106 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 HGFP14210 728 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 CCKBRP32239 447 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms