RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 GSTA5Q7RTV2 222 aa5.34□□□□□ -1.55
SYNE2-210ENST00000553455 SFTPA2Q8IWL1 248 aa5.34□□□□□ -1.55
SYNE2-210ENST00000553455 ZBTB2Q8N680 514 aa5.34□□□□□ -1.55
SYNE2-210ENST00000553455 HUS1BQ8NHY5 278 aa5.34□□□□□ -1.55
SYNE2-210ENST00000553455 TMEM163Q8TC26 289 aa5.34□□□□□ -1.55
SYNE2-210ENST00000553455 SNRNP27Q8WVK2 155 aaKnown RBP5.34□□□□□ -1.55
SYNE2-210ENST00000553455 ARHGEF26Q96DR7 871 aa5.34□□□□□ -1.55
SYNE2-210ENST00000553455 SH2D4AQ9H788 454 aa5.34□□□□□ -1.55
SYNE2-210ENST00000553455 RRP7BPQ9NSQ0 103 aa5.34□□□□□ -1.55
SYNE2-210ENST00000553455 ZBTB40Q9NUA8 1239 aa5.34□□□□□ -1.55
SYNE2-210ENST00000553455 TUBA8Q9NY65 449 aaPredicted RBP5.34□□□□□ -1.55
SYNE2-210ENST00000553455 PTGFRNQ9P2B2 879 aa5.34□□□□□ -1.55
SYNE2-210ENST00000553455 C11orf21Q9P2W6 132 aa5.34□□□□□ -1.55
SYNE2-210ENST00000553455 ZNF804BA4D1E1 1349 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 CHL1O00533 1208 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 LDB2O43679 373 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 TSPAN9O75954 239 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 MMP2P08253 660 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 PRF1P14222 555 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 AKR1B1P15121 316 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 RASSF2P50749 326 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 NANOS3P60323 173 aaKnown RBP5.33□□□□□ -1.56
SYNE2-210ENST00000553455 NUCB1Q02818 461 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 EPS8Q12929 822 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 AIMP2Q13155 320 aaKnown RBP5.33□□□□□ -1.56
SYNE2-210ENST00000553455 ARHGEF6Q15052 776 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 SRSF7Q16629 238 aaKnown RBP eCLIP5.33□□□□□ -1.56
SYNE2-210ENST00000553455 ZNF284Q2VY69 593 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 PLEKHS1Q5SXH7 462 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 KIAA0930Q6ICG6 404 aaPredicted RBP5.33□□□□□ -1.56
SYNE2-210ENST00000553455 PARM1Q6UWI2 310 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 GLDNQ6ZMI3 551 aaPredicted RBP5.33□□□□□ -1.56
SYNE2-210ENST00000553455 CLEC17AQ6ZS10 378 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 OR8H2Q8N162 312 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 ARFGAP1Q8N6T3 406 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 LSMEM1Q8N8F7 131 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 BEST2Q8NFU1 509 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 MPLKIPQ8TAP9 179 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 SLC35F5Q8WV83 523 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 CALML4Q96GE6 196 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 SLC41A2Q96JW4 573 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 SLITRK1Q96PX8 696 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 MXD3Q9BW11 206 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 RANGRFQ9HD47 186 aaPredicted RBP5.33□□□□□ -1.56
SYNE2-210ENST00000553455 CYSLTR2Q9NS75 346 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 NFE2L3Q9Y4A8 694 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 SNX8Q9Y5X2 465 aa5.33□□□□□ -1.56
SYNE2-210ENST00000553455 A0A1W2PQ09 198 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 I6L893 689 aaPredicted RBP5.32□□□□□ -1.56
SYNE2-210ENST00000553455 SCAMP1O15126 338 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 HCRTR2O43614 444 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 FGBP02675 491 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 CBSLP0DN79 551 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 ZNF182P17025 639 aaPredicted RBP5.32□□□□□ -1.56
SYNE2-210ENST00000553455 GNLYP22749 145 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 MYF6P23409 242 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 CHATP28329 748 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 CD38P28907 300 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 CBSP35520 551 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 THPOP40225 353 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 ALDH7A1P49419 539 aaKnown RBP5.32□□□□□ -1.56
SYNE2-210ENST00000553455 COMPP49747 757 aaPredicted RBP5.32□□□□□ -1.56
SYNE2-210ENST00000553455 CLCN3P51790 818 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 P2RX3P56373 397 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 SNX16P57768 344 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 PSMC6P62333 389 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 C2orf68Q2NKX9 166 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 USP41Q3LFD5 358 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 CDONQ4KMG0 1287 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 RAB41Q5JT25 222 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 C6orf141Q5SZD1 244 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 SYCE2Q6PIF2 218 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 LINGO2Q7L985 606 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 PATL1Q86TB9 770 aaKnown RBP5.32□□□□□ -1.56
SYNE2-210ENST00000553455 HAPLN4Q86UW8 402 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 TICAM2Q86XR7 235 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 MB21D2Q8IYB1 491 aaPredicted RBP5.32□□□□□ -1.56
SYNE2-210ENST00000553455 MMP21Q8N119 569 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 C17orf53Q8N3J3 647 aaPredicted RBP5.32□□□□□ -1.56
SYNE2-210ENST00000553455 ZNF548Q8NEK5 533 aaPredicted RBP5.32□□□□□ -1.56
SYNE2-210ENST00000553455 GABPB2Q8TAK5 448 aaPredicted RBP5.32□□□□□ -1.56
SYNE2-210ENST00000553455 ZKSCAN4Q969J2 545 aaPredicted RBP5.32□□□□□ -1.56
SYNE2-210ENST00000553455 ERGIC1Q969X5 290 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 PGAM5Q96HS1 289 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 FAM110AQ9BQ89 295 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 SMARCAD1Q9H4L7 1026 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 FZD3Q9NPG1 666 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 SIRT3Q9NTG7 399 aaPredicted RBP5.32□□□□□ -1.56
SYNE2-210ENST00000553455 DECR2Q9NUI1 292 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 CISD1Q9NZ45 108 aaKnown RBP5.32□□□□□ -1.56
SYNE2-210ENST00000553455 MTMR6Q9Y217 621 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 TTLL3Q9Y4R7 772 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 CEPT1Q9Y6K0 416 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 SESN1Q9Y6P5 492 aa5.32□□□□□ -1.56
SYNE2-210ENST00000553455 CDRT15L2A8MXV6 281 aa5.31□□□□□ -1.56
SYNE2-210ENST00000553455 B4DLN1 442 aa5.31□□□□□ -1.56
SYNE2-210ENST00000553455 NDUFS3O75489 264 aa5.31□□□□□ -1.56
SYNE2-210ENST00000553455 SLC25A12O75746 678 aa5.31□□□□□ -1.56
SYNE2-210ENST00000553455 STARD3NLO95772 234 aa5.31□□□□□ -1.56
SYNE2-210ENST00000553455 RB1P06400 928 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms