RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 TLR10Q9BXR5 811 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 SLC25A51Q9H1U9 297 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 TRHDEQ9UKU6 1024 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 PHTF1Q9UMS5 762 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 RPL26L1Q9UNX3 145 aaKnown RBP11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 PCDHB9Q9Y5E1 797 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 DNAH14Q0VDD8 3507 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 CACNA1AO00555 2505 aa11.78□□□□□ -0.52
TRAFD1-209ENST00000552896 IGLON5A6NGN9 336 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 CAPN8A6NHC0 703 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 A6NNZ2 444 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 CDX4O14627 284 aaPredicted RBP11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 WNT9AO14904 365 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 MAGEC1O60732 1142 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 TM7SF2O76062 418 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 STK10O94804 968 aaKnown RBP11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 WNT1P04628 370 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 ELFN1P0C7U0 828 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 RBP3P10745 1247 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 CYP2A6P11509 494 aaPredicted RBP11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 VIPR1P32241 457 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 CTSKP43235 329 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 ATXN3P54252 364 aaPredicted RBP11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 C21orf59P57076 290 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 FAM193AP78312 1265 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 BNC1Q01954 994 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 SGCGQ13326 291 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 IHHQ14623 411 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 AGERQ15109 404 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 STPG1Q5TH74 334 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 GCNT7Q6ZNI0 430 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 B4GALNT4Q76KP1 1039 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 ABI3BPQ7Z7G0 1075 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 REXO1L1PQ8IX06 675 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 NDUFAF2Q8N183 169 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 ZNF567Q8N184 647 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 PIH1D2Q8WWB5 315 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 KLK6Q92876 244 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 RBM15Q96T37 977 aaKnown RBP eCLIP11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 KLF6Q99612 283 aaPredicted RBP11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 MYOCQ99972 504 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 GTPBP2Q9BX10 602 aaKnown RBP11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 FRMD8P1Q9BZ68 369 aaPredicted RBP11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 GLOD4Q9HC38 313 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 PCDH9Q9HC56 1237 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 FZD3Q9NPG1 666 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 FSCN3Q9NQT6 498 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 GPR27Q9NS67 375 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 DNAAF2Q9NVR5 837 aaKnown RBP11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 KLHL8Q9P2G9 620 aaPredicted RBP11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 B4GALT6Q9UBX8 382 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 DNPEPQ9ULA0 475 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 ANKRD6Q9Y2G4 727 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 PPIL1Q9Y3C6 166 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 BPTFQ12830 3046 aa11.77□□□□□ -0.53
TRAFD1-209ENST00000552896 A0A0J9YYE9 177 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 NPIPB15A6NHN6 443 aaPredicted RBP11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 PSMD11O00231 422 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 KCNK3O14649 394 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 SLC30A4O14863 429 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 MMP20O60882 483 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 PRLP01236 227 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 TRBC1P01850 177 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 PRKCGP05129 697 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 PDHA1P08559 390 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 ZNF883P0CG24 379 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 ZNF30P17039 623 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 ITIH2P19823 946 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 NFKB1P19838 968 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 MSNP26038 577 aaKnown RBP11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 RBL1P28749 1068 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 CD68P34810 354 aaPredicted RBP11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 LIG3P49916 1009 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 EPHB1P54762 984 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 NXPH1P58417 271 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 STAT4Q14765 748 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 CNGA3Q16281 694 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 ZNF423Q2M1K9 1284 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 KIF19Q2TAC6 998 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 ITPRIPL1Q6GPH6 555 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 LIPIQ6XZB0 460 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 SLC13A5Q86YT5 568 aaPredicted RBP11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 SLC35B2Q8TB61 432 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 SCRN2Q96FV2 425 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 TRIB3Q96RU7 358 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 FAM118BQ9BPY3 351 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 ADGRE3Q9BY15 652 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 GBA3Q9H227 469 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 R3HDM2Q9Y2K5 976 aaKnown RBP11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 JRKLQ9Y4A0 524 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 HS3ST3A1Q9Y663 406 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 ARID1BQ8NFD5 2236 aaPredicted RBP11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 PLXNB3Q9ULL4 1909 aa11.76□□□□□ -0.53
TRAFD1-209ENST00000552896 PCNX2A6NKB5 2137 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 TCRBV7S2A1N4TA0A589 114 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 H0Y8X5 98 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 TLR4O00206 839 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 TOR1BO14657 336 aa11.75□□□□□ -0.53
TRAFD1-209ENST00000552896 FPGTO14772 594 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms