RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 ITGB2P05107 769 aa13.66□□□□□ -0.22
TROAP-211ENST00000549891 LIPCP11150 499 aa13.66□□□□□ -0.22
TROAP-211ENST00000549891 NDST2P52849 883 aa13.66□□□□□ -0.22
TROAP-211ENST00000549891 KIAA1024LP59773 190 aa13.66□□□□□ -0.22
TROAP-211ENST00000549891 TPI1P60174 286 aa13.66□□□□□ -0.22
TROAP-211ENST00000549891 POLR2LP62875 67 aaKnown RBP13.66□□□□□ -0.22
TROAP-211ENST00000549891 C1QBPQ07021 282 aaKnown RBP13.66□□□□□ -0.22
TROAP-211ENST00000549891 TAF8Q7Z7C8 310 aa13.66□□□□□ -0.22
TROAP-211ENST00000549891 ZSCAN1Q8NBB4 408 aa13.66□□□□□ -0.22
TROAP-211ENST00000549891 OR56A4Q8NGH8 313 aa13.66□□□□□ -0.22
TROAP-211ENST00000549891 SGF29Q96ES7 293 aa13.66□□□□□ -0.22
TROAP-211ENST00000549891 CMKLR1Q99788 373 aa13.66□□□□□ -0.22
TROAP-211ENST00000549891 CNPY3Q9BT09 278 aa13.66□□□□□ -0.22
TROAP-211ENST00000549891 SEPT11Q9NVA2 429 aaKnown RBP13.66□□□□□ -0.22
TROAP-211ENST00000549891 PISDQ9UG56 409 aa13.66□□□□□ -0.22
TROAP-211ENST00000549891 LOXL2Q9Y4K0 774 aa13.66□□□□□ -0.22
TROAP-211ENST00000549891 ARHGAP42A6NI28 874 aa13.65□□□□□ -0.22
TROAP-211ENST00000549891 EIF3CLB5ME19 914 aaKnown RBP13.65□□□□□ -0.22
TROAP-211ENST00000549891 PDE2AO00408 941 aaPredicted RBP13.65□□□□□ -0.22
TROAP-211ENST00000549891 TNFRSF10CO14798 259 aa13.65□□□□□ -0.22
TROAP-211ENST00000549891 ZW10O43264 779 aa13.65□□□□□ -0.22
TROAP-211ENST00000549891 PRAMEF11O60813 436 aa13.65□□□□□ -0.22
TROAP-211ENST00000549891 ELFN1P0C7U0 828 aa13.65□□□□□ -0.22
TROAP-211ENST00000549891 SFTPCP11686 197 aa13.65□□□□□ -0.22
TROAP-211ENST00000549891 CSNK1DP48730 415 aa13.65□□□□□ -0.22
TROAP-211ENST00000549891 KLK7P49862 253 aa13.65□□□□□ -0.22
TROAP-211ENST00000549891 ARHGEF7Q14155 803 aa13.65□□□□□ -0.22
TROAP-211ENST00000549891 TSR1Q2NL82 804 aaKnown RBP13.65□□□□□ -0.22
TROAP-211ENST00000549891 CERCAMQ5T4B2 595 aa13.65□□□□□ -0.22
TROAP-211ENST00000549891 DCUN1D2Q6PH85 259 aa13.65□□□□□ -0.22
TROAP-211ENST00000549891 OGFOD3Q6PK18 319 aa13.65□□□□□ -0.22
TROAP-211ENST00000549891 MON1BQ7L1V2 547 aa13.65□□□□□ -0.22
TROAP-211ENST00000549891 PRICKLE2Q7Z3G6 844 aa13.65□□□□□ -0.22
TROAP-211ENST00000549891 CAMK1DQ8IU85 385 aa13.65□□□□□ -0.22
TROAP-211ENST00000549891 Q8N9G6 341 aaPredicted RBP13.65□□□□□ -0.22
TROAP-211ENST00000549891 FAM46DQ8NEK8 389 aa13.65□□□□□ -0.22
TROAP-211ENST00000549891 NEK11Q8NG66 645 aa13.65□□□□□ -0.22
TROAP-211ENST00000549891 ENOX1Q8TC92 643 aaKnown RBP13.65□□□□□ -0.22
TROAP-211ENST00000549891 PDXPQ96GD0 296 aa13.65□□□□□ -0.22
TROAP-211ENST00000549891 PCMTD1Q96MG8 357 aaPredicted RBP13.65□□□□□ -0.22
TROAP-211ENST00000549891 MCEEQ96PE7 176 aa13.65□□□□□ -0.22
TROAP-211ENST00000549891 PCDHB18PQ96TA0 734 aa13.65□□□□□ -0.22
TROAP-211ENST00000549891 EIF3CQ99613 913 aaKnown RBP13.65□□□□□ -0.22
TROAP-211ENST00000549891 LRRC19Q9H756 370 aa13.65□□□□□ -0.22
TROAP-211ENST00000549891 PDFQ9HBH1 243 aa13.65□□□□□ -0.22
TROAP-211ENST00000549891 AKAP7Q9P0M2 348 aaPredicted RBP13.65□□□□□ -0.22
TROAP-211ENST00000549891 PCDHB11Q9Y5F2 797 aa13.65□□□□□ -0.22
TROAP-211ENST00000549891 EFSO43281 561 aa13.64□□□□□ -0.23
TROAP-211ENST00000549891 NUDT21O43809 227 aaKnown RBP13.64□□□□□ -0.23
TROAP-211ENST00000549891 PALMO75781 387 aa13.64□□□□□ -0.23
TROAP-211ENST00000549891 RECQL5O94762 991 aaPredicted RBP13.64□□□□□ -0.23
TROAP-211ENST00000549891 WISP1O95388 367 aa13.64□□□□□ -0.23
TROAP-211ENST00000549891 HOXC4P09017 264 aaPredicted RBP13.64□□□□□ -0.23
TROAP-211ENST00000549891 CCDC172P0C7W6 258 aa13.64□□□□□ -0.23
TROAP-211ENST00000549891 HGFP14210 728 aa13.64□□□□□ -0.23
TROAP-211ENST00000549891 CD82P27701 267 aa13.64□□□□□ -0.23
TROAP-211ENST00000549891 ZFP36L1Q07352 338 aaKnown RBP13.64□□□□□ -0.23
TROAP-211ENST00000549891 BCL2L1Q07817 233 aa13.64□□□□□ -0.23
TROAP-211ENST00000549891 KRT31Q15323 416 aa13.64□□□□□ -0.23
TROAP-211ENST00000549891 C14orf28Q4W4Y0 310 aa13.64□□□□□ -0.23
TROAP-211ENST00000549891 MANEAQ5SRI9 462 aa13.64□□□□□ -0.23
TROAP-211ENST00000549891 TMEM164Q5U3C3 297 aa13.64□□□□□ -0.23
TROAP-211ENST00000549891 CDKAL1Q5VV42 579 aa13.64□□□□□ -0.23
TROAP-211ENST00000549891 SPRED1Q7Z699 444 aa13.64□□□□□ -0.23
TROAP-211ENST00000549891 SRLQ86TD4 932 aa13.64□□□□□ -0.23
TROAP-211ENST00000549891 ANKRD20A12PQ8NF67 263 aa13.64□□□□□ -0.23
TROAP-211ENST00000549891 KIAA1524Q8TCG1 905 aa13.64□□□□□ -0.23
TROAP-211ENST00000549891 B3GNT4Q9C0J1 378 aa13.64□□□□□ -0.23
TROAP-211ENST00000549891 DPEP2Q9H4A9 486 aa13.64□□□□□ -0.23
TROAP-211ENST00000549891 LRIT1Q9P2V4 623 aa13.64□□□□□ -0.23
TROAP-211ENST00000549891 TCRBV5S1A1TA0A578 114 aa13.63□□□□□ -0.23
TROAP-211ENST00000549891 TMEM202A6NGA9 273 aa13.63□□□□□ -0.23
TROAP-211ENST00000549891 B4DGG1 531 aa13.63□□□□□ -0.23
TROAP-211ENST00000549891 J3KR12 359 aa13.63□□□□□ -0.23
TROAP-211ENST00000549891 EPHB6O15197 1021 aa13.63□□□□□ -0.23
TROAP-211ENST00000549891 NOBOXO60393 691 aa13.63□□□□□ -0.23
TROAP-211ENST00000549891 BUB1BO60566 1050 aaPredicted RBP13.63□□□□□ -0.23
TROAP-211ENST00000549891 NFKBIAP25963 317 aa13.63□□□□□ -0.23
TROAP-211ENST00000549891 TRIM23P36406 574 aa13.63□□□□□ -0.23
TROAP-211ENST00000549891 PAPOLAP51003 745 aaKnown RBP13.63□□□□□ -0.23
TROAP-211ENST00000549891 RPL7AP62424 266 aaKnown RBP13.63□□□□□ -0.23
TROAP-211ENST00000549891 NSUN2Q08J23 767 aaKnown RBP eCLIP13.63□□□□□ -0.23
TROAP-211ENST00000549891 NFATC3Q12968 1075 aa13.63□□□□□ -0.23
TROAP-211ENST00000549891 HLTFQ14527 1009 aaKnown RBP eCLIP13.63□□□□□ -0.23
TROAP-211ENST00000549891 RFTN1Q14699 578 aaPredicted RBP13.63□□□□□ -0.23
TROAP-211ENST00000549891 TGIF1Q15583 401 aa13.63□□□□□ -0.23
TROAP-211ENST00000549891 SPECC1LQ69YQ0 1117 aa13.63□□□□□ -0.23
TROAP-211ENST00000549891 PPP1R2P3Q6NXS1 205 aa13.63□□□□□ -0.23
TROAP-211ENST00000549891 LIPIQ6XZB0 460 aa13.63□□□□□ -0.23
TROAP-211ENST00000549891 PLA2G15Q8NCC3 412 aa13.63□□□□□ -0.23
TROAP-211ENST00000549891 TSEN2Q8NCE0 465 aaKnown RBP13.63□□□□□ -0.23
TROAP-211ENST00000549891 OR1E3Q8WZA6 343 aa13.63□□□□□ -0.23
TROAP-211ENST00000549891 FUBP1Q96AE4 644 aaKnown RBP13.63□□□□□ -0.23
TROAP-211ENST00000549891 CELF6Q96J87 481 aaKnown RBP13.63□□□□□ -0.23
TROAP-211ENST00000549891 AGPAT1Q99943 283 aa13.63□□□□□ -0.23
TROAP-211ENST00000549891 CINPQ9BW66 212 aaPredicted RBP13.63□□□□□ -0.23
TROAP-211ENST00000549891 WDR26Q9H7D7 661 aa13.63□□□□□ -0.23
TROAP-211ENST00000549891 SP110Q9HB58 689 aa13.63□□□□□ -0.23
TROAP-211ENST00000549891 FGF22Q9HCT0 170 aa13.63□□□□□ -0.23
TROAP-211ENST00000549891 KCTD5Q9NXV2 234 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms