RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 B4GALT6Q9UBX8 382 aa21.18■□□□□ 0.98
CACNB3-210ENST00000548874 ASIC3Q9UHC3 531 aa21.18■□□□□ 0.98
CACNB3-210ENST00000548874 NPIPB15A6NHN6 443 aaPredicted RBP21.17■□□□□ 0.98
CACNB3-210ENST00000548874 LRRC72A6NJI9 287 aa21.17■□□□□ 0.98
CACNB3-210ENST00000548874 USP12O75317 370 aa21.17■□□□□ 0.98
CACNB3-210ENST00000548874 ALPIP09923 528 aa21.17■□□□□ 0.98
CACNB3-210ENST00000548874 TPSB2P20231 275 aa21.17■□□□□ 0.98
CACNB3-210ENST00000548874 NFKBIAP25963 317 aa21.17■□□□□ 0.98
CACNB3-210ENST00000548874 HNF1BP35680 557 aa21.17■□□□□ 0.98
CACNB3-210ENST00000548874 TNNT3P45378 269 aaPredicted RBP21.17■□□□□ 0.98
CACNB3-210ENST00000548874 FAM193AP78312 1265 aa21.17■□□□□ 0.98
CACNB3-210ENST00000548874 MRPS25P82663 173 aaKnown RBP21.17■□□□□ 0.98
CACNB3-210ENST00000548874 TCF15Q12870 199 aa21.17■□□□□ 0.98
CACNB3-210ENST00000548874 PTPRRQ15256 657 aa21.17■□□□□ 0.98
CACNB3-210ENST00000548874 TPSAB1Q15661 275 aa21.17■□□□□ 0.98
CACNB3-210ENST00000548874 SYCP2LQ5T4T6 812 aa21.17■□□□□ 0.98
CACNB3-210ENST00000548874 CCDC70Q6NSX1 233 aa21.17■□□□□ 0.98
CACNB3-210ENST00000548874 C11orf74Q86VG3 221 aa21.17■□□□□ 0.98
CACNB3-210ENST00000548874 SLC25A41Q8N5S1 370 aa21.17■□□□□ 0.98
CACNB3-210ENST00000548874 NOA1Q8NC60 698 aaKnown RBP21.17■□□□□ 0.98
CACNB3-210ENST00000548874 APOL2Q9BQE5 337 aa21.17■□□□□ 0.98
CACNB3-210ENST00000548874 GPR174Q9BXC1 333 aa21.17■□□□□ 0.98
CACNB3-210ENST00000548874 TCRBV7S3A2A0A539 114 aa21.16■□□□□ 0.98
CACNB3-210ENST00000548874 CYP2A6P11509 494 aaPredicted RBP21.16■□□□□ 0.98
CACNB3-210ENST00000548874 LHCGRP22888 699 aa21.16■□□□□ 0.98
CACNB3-210ENST00000548874 VIPR1P32241 457 aa21.16■□□□□ 0.98
CACNB3-210ENST00000548874 ADCY8P40145 1251 aa21.16■□□□□ 0.98
CACNB3-210ENST00000548874 CDK16Q00536 496 aa21.16■□□□□ 0.98
CACNB3-210ENST00000548874 SEMG2Q02383 582 aa21.16■□□□□ 0.98
CACNB3-210ENST00000548874 MSLNQ13421 630 aaPredicted RBP21.16■□□□□ 0.98
CACNB3-210ENST00000548874 CDKN3Q16667 212 aa21.16■□□□□ 0.98
CACNB3-210ENST00000548874 LINC00523Q86TU6 105 aa21.16■□□□□ 0.98
CACNB3-210ENST00000548874 TRIM69Q86WT6 500 aa21.16■□□□□ 0.98
CACNB3-210ENST00000548874 CADM4Q8NFZ8 388 aa21.16■□□□□ 0.98
CACNB3-210ENST00000548874 KCNH6Q9H252 994 aa21.16■□□□□ 0.98
CACNB3-210ENST00000548874 C6orf106Q9H6K1 298 aaPredicted RBP21.16■□□□□ 0.98
CACNB3-210ENST00000548874 MAGEE1Q9HCI5 957 aa21.16■□□□□ 0.98
CACNB3-210ENST00000548874 FANCMQ8IYD8 2048 aa21.16■□□□□ 0.98
CACNB3-210ENST00000548874 TBC1D3DA0A087WVF3 549 aa21.15■□□□□ 0.98
CACNB3-210ENST00000548874 TBC1D3IA0A087WXS9 549 aa21.15■□□□□ 0.98
CACNB3-210ENST00000548874 TBC1D3EA0A087X179 549 aa21.15■□□□□ 0.98
CACNB3-210ENST00000548874 TBC1D3KA0A087X1G2 549 aa21.15■□□□□ 0.98
CACNB3-210ENST00000548874 TBC1D3FA6NER0 549 aaPredicted RBP21.15■□□□□ 0.98
CACNB3-210ENST00000548874 TBC1D3LB9A6J9 549 aa21.15■□□□□ 0.98
CACNB3-210ENST00000548874 H0Y858 1186 aa21.15■□□□□ 0.98
CACNB3-210ENST00000548874 NEMP1O14524 444 aa21.15■□□□□ 0.98
CACNB3-210ENST00000548874 DNALI1O14645 258 aaPredicted RBP21.15■□□□□ 0.98
CACNB3-210ENST00000548874 NDUFS2O75306 463 aa21.15■□□□□ 0.98
CACNB3-210ENST00000548874 TBC1D3HP0C7X1 549 aa21.15■□□□□ 0.98
CACNB3-210ENST00000548874 LMAN1P49257 510 aa21.15■□□□□ 0.98
CACNB3-210ENST00000548874 PPP2CBP62714 309 aa21.15■□□□□ 0.98
CACNB3-210ENST00000548874 PPP2CAP67775 309 aa21.15■□□□□ 0.98
CACNB3-210ENST00000548874 RPL6Q02878 288 aaKnown RBP21.15■□□□□ 0.98
CACNB3-210ENST00000548874 TMEM259Q4ZIN3 620 aa21.15■□□□□ 0.98
CACNB3-210ENST00000548874 RNASEH2BQ5TBB1 312 aaKnown RBP21.15■□□□□ 0.98
CACNB3-210ENST00000548874 ANKRD22Q5VYY1 191 aa21.15■□□□□ 0.98
CACNB3-210ENST00000548874 KIAA0895LQ68EN5 471 aa21.15■□□□□ 0.98
CACNB3-210ENST00000548874 TBC1D3GQ6DHY5 549 aa21.15■□□□□ 0.98
CACNB3-210ENST00000548874 TBC1D3CQ6IPX1 549 aa21.15■□□□□ 0.98
CACNB3-210ENST00000548874 KIAA1161Q6NSJ0 714 aa21.15■□□□□ 0.98
CACNB3-210ENST00000548874 C8orf74Q6P047 294 aa21.15■□□□□ 0.98
CACNB3-210ENST00000548874 CRTC1Q6UUV9 634 aa21.15■□□□□ 0.98
CACNB3-210ENST00000548874 TBC1D3Q8IZP1 549 aaPredicted RBP21.15■□□□□ 0.98
CACNB3-210ENST00000548874 CBARPQ8N350 705 aaPredicted RBP21.15■□□□□ 0.98
CACNB3-210ENST00000548874 NAT8LQ8N9F0 302 aa21.15■□□□□ 0.98
CACNB3-210ENST00000548874 SRPK1Q96SB4 655 aaKnown RBP21.15■□□□□ 0.98
CACNB3-210ENST00000548874 ERP44Q9BS26 406 aa21.15■□□□□ 0.98
CACNB3-210ENST00000548874 CASS4Q9NQ75 786 aa21.15■□□□□ 0.98
CACNB3-210ENST00000548874 TPX2Q9ULW0 747 aaKnown RBP21.15■□□□□ 0.98
CACNB3-210ENST00000548874 ZFR2Q9UPR6 939 aaKnown RBP21.15■□□□□ 0.98
CACNB3-210ENST00000548874 SPO11Q9Y5K1 396 aa21.15■□□□□ 0.98
CACNB3-210ENST00000548874 FAM47DPA6NHR8 397 aa21.14■□□□□ 0.97
CACNB3-210ENST00000548874 LATO43561 262 aa21.14■□□□□ 0.97
CACNB3-210ENST00000548874 RNGTTO60942 597 aaKnown RBP21.14■□□□□ 0.97
CACNB3-210ENST00000548874 TMEM63AO94886 807 aa21.14■□□□□ 0.97
CACNB3-210ENST00000548874 HEXIM1O94992 359 aaKnown RBP21.14■□□□□ 0.97
CACNB3-210ENST00000548874 PCDH8O95206 1070 aa21.14■□□□□ 0.97
CACNB3-210ENST00000548874 GRIA1P42261 906 aa21.14■□□□□ 0.97
CACNB3-210ENST00000548874 CCR5P51681 352 aa21.14■□□□□ 0.97
CACNB3-210ENST00000548874 CNGA3Q16281 694 aa21.14■□□□□ 0.97
CACNB3-210ENST00000548874 SPDYCQ5MJ68 293 aa21.14■□□□□ 0.97
CACNB3-210ENST00000548874 LIPIQ6XZB0 460 aa21.14■□□□□ 0.97
CACNB3-210ENST00000548874 TSPAN33Q86UF1 283 aa21.14■□□□□ 0.97
CACNB3-210ENST00000548874 HORMAD1Q86X24 394 aa21.14■□□□□ 0.97
CACNB3-210ENST00000548874 PPIL6Q8IXY8 311 aa21.14■□□□□ 0.97
CACNB3-210ENST00000548874 OR52K1Q8NGK4 314 aa21.14■□□□□ 0.97
CACNB3-210ENST00000548874 LRRC1Q9BTT6 524 aa21.14■□□□□ 0.97
CACNB3-210ENST00000548874 DUSP15Q9H1R2 295 aaPredicted RBP21.14■□□□□ 0.97
CACNB3-210ENST00000548874 A0A1W2PQU0 124 aa21.13■□□□□ 0.97
CACNB3-210ENST00000548874 PRR23AA6NEV1 266 aa21.13■□□□□ 0.97
CACNB3-210ENST00000548874 METTL12A8MUP2 240 aa21.13■□□□□ 0.97
CACNB3-210ENST00000548874 EFCAB8A8MWE9 144 aa21.13■□□□□ 0.97
CACNB3-210ENST00000548874 A8MX80 341 aa21.13■□□□□ 0.97
CACNB3-210ENST00000548874 MAP3K13O43283 966 aa21.13■□□□□ 0.97
CACNB3-210ENST00000548874 IGHV4-34P06331 123 aa21.13■□□□□ 0.97
CACNB3-210ENST00000548874 PIRTP0C851 137 aa21.13■□□□□ 0.97
CACNB3-210ENST00000548874 ZNF30P17039 623 aa21.13■□□□□ 0.97
CACNB3-210ENST00000548874 LIG3P49916 1009 aa21.13■□□□□ 0.97
CACNB3-210ENST00000548874 RPS21P63220 83 aaKnown RBP21.13■□□□□ 0.97
CACNB3-210ENST00000548874 CDH17Q12864 832 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms