RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 CFAP36Q96G28 342 aa28.9■■■□□ 2.22
BRF1-213ENST00000548421 KIFC1Q9BW19 673 aa28.9■■■□□ 2.22
BRF1-213ENST00000548421 PABPC3Q9H361 631 aaKnown RBP28.9■■■□□ 2.22
BRF1-213ENST00000548421 TBC1D17Q9HA65 648 aa28.9■■■□□ 2.22
BRF1-213ENST00000548421 MAGEE1Q9HCI5 957 aa28.9■■■□□ 2.22
BRF1-213ENST00000548421 SPO11Q9Y5K1 396 aa28.9■■■□□ 2.22
BRF1-213ENST00000548421 FAM237BA0A1B0GVD1 139 aa28.89■■■□□ 2.22
BRF1-213ENST00000548421 CAPN8A6NHC0 703 aa28.89■■■□□ 2.22
BRF1-213ENST00000548421 FAM170BA6NMN3 283 aa28.89■■■□□ 2.22
BRF1-213ENST00000548421 ALPIP09923 528 aa28.89■■■□□ 2.22
BRF1-213ENST00000548421 COL9A1P20849 921 aa28.89■■■□□ 2.22
BRF1-213ENST00000548421 NFKBIAP25963 317 aa28.89■■■□□ 2.22
BRF1-213ENST00000548421 COPAP53621 1224 aa28.89■■■□□ 2.22
BRF1-213ENST00000548421 ZXDAP98168 799 aa28.89■■■□□ 2.22
BRF1-213ENST00000548421 UGP2Q16851 508 aa28.89■■■□□ 2.22
BRF1-213ENST00000548421 ZNF776Q68DI1 518 aaPredicted RBP28.89■■■□□ 2.22
BRF1-213ENST00000548421 PKN3Q6P5Z2 889 aa28.89■■■□□ 2.22
BRF1-213ENST00000548421 PARS2Q7L3T8 475 aaKnown RBP28.89■■■□□ 2.22
BRF1-213ENST00000548421 SCRN2Q96FV2 425 aa28.89■■■□□ 2.22
BRF1-213ENST00000548421 SMIM14Q96QK8 99 aa28.89■■■□□ 2.22
BRF1-213ENST00000548421 TRABDQ9H4I3 376 aa28.89■■■□□ 2.22
BRF1-213ENST00000548421 LRRC4CQ9HCJ2 640 aa28.89■■■□□ 2.22
BRF1-213ENST00000548421 CD248Q9HCU0 757 aa28.89■■■□□ 2.22
BRF1-213ENST00000548421 DYRK4Q9NR20 520 aa28.89■■■□□ 2.22
BRF1-213ENST00000548421 CHRAC1Q9NRG0 131 aa28.89■■■□□ 2.22
BRF1-213ENST00000548421 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP28.89■■■□□ 2.22
BRF1-213ENST00000548421 UPK3BL1B0FP48 263 aa28.88■■■□□ 2.21
BRF1-213ENST00000548421 CHURC1-FNTBB4DL54 471 aa28.88■■■□□ 2.21
BRF1-213ENST00000548421 UPK3BL2E5RIL1 263 aa28.88■■■□□ 2.21
BRF1-213ENST00000548421 RIPK2O43353 540 aa28.88■■■□□ 2.21
BRF1-213ENST00000548421 ACSL3O95573 720 aa28.88■■■□□ 2.21
BRF1-213ENST00000548421 ADH1BP00325 375 aa28.88■■■□□ 2.21
BRF1-213ENST00000548421 POLBP06746 335 aa28.88■■■□□ 2.21
BRF1-213ENST00000548421 TSHRP16473 764 aa28.88■■■□□ 2.21
BRF1-213ENST00000548421 HSD17B3P37058 310 aa28.88■■■□□ 2.21
BRF1-213ENST00000548421 CST6Q15828 149 aa28.88■■■□□ 2.21
BRF1-213ENST00000548421 GLT6D1Q7Z4J2 308 aa28.88■■■□□ 2.21
BRF1-213ENST00000548421 ARRDC3Q96B67 414 aa28.88■■■□□ 2.21
BRF1-213ENST00000548421 MCCC1Q96RQ3 725 aaPredicted RBP28.88■■■□□ 2.21
BRF1-213ENST00000548421 LYSMD1Q96S90 227 aa28.88■■■□□ 2.21
BRF1-213ENST00000548421 CRTAMO95727 393 aa28.87■■■□□ 2.21
BRF1-213ENST00000548421 TIMP2P16035 220 aa28.87■■■□□ 2.21
BRF1-213ENST00000548421 XPAP23025 273 aaPredicted RBP28.87■■■□□ 2.21
BRF1-213ENST00000548421 HNF1BP35680 557 aa28.87■■■□□ 2.21
BRF1-213ENST00000548421 ABL2P42684 1182 aa28.87■■■□□ 2.21
BRF1-213ENST00000548421 METAP1P53582 386 aa28.87■■■□□ 2.21
BRF1-213ENST00000548421 FZD5Q13467 585 aa28.87■■■□□ 2.21
BRF1-213ENST00000548421 UAP1Q16222 522 aaPredicted RBP28.87■■■□□ 2.21
BRF1-213ENST00000548421 UNC5AQ6ZN44 842 aa28.87■■■□□ 2.21
BRF1-213ENST00000548421 NLRP9Q7RTR0 991 aa28.87■■■□□ 2.21
BRF1-213ENST00000548421 TMEM135Q86UB9 458 aa28.87■■■□□ 2.21
BRF1-213ENST00000548421 MDGA1Q8NFP4 955 aa28.87■■■□□ 2.21
BRF1-213ENST00000548421 TRIM56Q9BRZ2 755 aaKnown RBP28.87■■■□□ 2.21
BRF1-213ENST00000548421 ZNF711Q9Y462 761 aa28.87■■■□□ 2.21
BRF1-213ENST00000548421 RPS6KL1Q9Y6S9 549 aa28.87■■■□□ 2.21
BRF1-213ENST00000548421 MROH6A6NGR9 719 aa28.86■■■□□ 2.21
BRF1-213ENST00000548421 LDB2O43679 373 aa28.86■■■□□ 2.21
BRF1-213ENST00000548421 SPAG6O75602 509 aa28.86■■■□□ 2.21
BRF1-213ENST00000548421 USP1O94782 785 aa28.86■■■□□ 2.21
BRF1-213ENST00000548421 GSTA2P09210 222 aa28.86■■■□□ 2.21
BRF1-213ENST00000548421 GPX6P59796 221 aa28.86■■■□□ 2.21
BRF1-213ENST00000548421 RPS14P62263 151 aaKnown RBP28.86■■■□□ 2.21
BRF1-213ENST00000548421 TAF1AQ15573 450 aaPredicted RBP28.86■■■□□ 2.21
BRF1-213ENST00000548421 STEAP4Q687X5 459 aa28.86■■■□□ 2.21
BRF1-213ENST00000548421 CAPN12Q6ZSI9 719 aa28.86■■■□□ 2.21
BRF1-213ENST00000548421 TTC7BQ86TV6 843 aa28.86■■■□□ 2.21
BRF1-213ENST00000548421 OSBPL6Q9BZF3 934 aa28.86■■■□□ 2.21
BRF1-213ENST00000548421 MKRN2Q9H000 416 aaKnown RBP28.86■■■□□ 2.21
BRF1-213ENST00000548421 EPB41L4BQ9H329 900 aa28.86■■■□□ 2.21
BRF1-213ENST00000548421 VPS37BQ9H9H4 285 aa28.86■■■□□ 2.21
BRF1-213ENST00000548421 ATG13O75143 517 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 C5AR1P21730 350 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 SSTR1P30872 391 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 PHBP35232 272 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 CRYMQ14894 314 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 PTPRRQ15256 657 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 SPANXN3Q5MJ09 141 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 UBAP2Q5T6F2 1119 aaKnown RBP28.85■■■□□ 2.21
BRF1-213ENST00000548421 TMEM92Q6UXU6 159 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 C3orf62Q6ZUJ4 267 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.85■■■□□ 2.21
BRF1-213ENST00000548421 PJA1Q8NG27 643 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 ZNF669Q96BR6 464 aaPredicted RBP28.85■■■□□ 2.21
BRF1-213ENST00000548421 HDAC8Q9BY41 377 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 PLAC1Q9HBJ0 212 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 ARL5AQ9Y689 179 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 NPIPB15A6NHN6 443 aaPredicted RBP28.85■■■□□ 2.21
BRF1-213ENST00000548421 C2orf81A6NN90 581 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 STK25O00506 426 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 MID1O15344 667 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 PAPSS2O95340 614 aaPredicted RBP28.85■■■□□ 2.21
BRF1-213ENST00000548421 CYP2A6P11509 494 aaPredicted RBP28.85■■■□□ 2.21
BRF1-213ENST00000548421 SUOXP51687 545 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 NEK3P51956 506 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 PDE1BQ01064 536 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 CRY1Q16526 586 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 ANKRD20A4Q4UJ75 823 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 LRRC73Q5JTD7 316 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 FBXL19Q6PCT2 694 aa28.85■■■□□ 2.21
BRF1-213ENST00000548421 CES3Q6UWW8 571 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms