RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 CKMT2P17540 419 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 KDELR1P24390 212 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 HSPA13P48723 471 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 STAT5BP51692 787 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 OAZ1P54368 228 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 MPP3Q13368 585 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 DMC1Q14565 340 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 MAPRE2Q15555 327 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 CYP51A1Q16850 503 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 KIZQ2M2Z5 673 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 ABHD17CQ6PCB6 329 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 TRMT10BQ6PF06 316 aaKnown RBP5.52□□□□□ -1.53
LIMA1-203ENST00000547825 OFCC1Q8IZS5 231 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 JOSD2Q8TAC2 188 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 CPT1BQ92523 772 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 CDHR1Q96JP9 859 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 RNF145Q96MT1 663 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 FANCD2OSQ96PS1 177 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 PANX3Q96QZ0 392 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 APBA2Q99767 749 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 HSD17B14Q9BPX1 270 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 SPOCK3Q9BQ16 436 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 BBS2Q9BXC9 721 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 UTP6Q9NYH9 597 aaKnown RBP5.52□□□□□ -1.53
LIMA1-203ENST00000547825 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.52□□□□□ -1.53
LIMA1-203ENST00000547825 SRRDQ9UH36 339 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 CDH22Q9UJ99 828 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 GABRQQ9UN88 632 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 IGLV3-22A0A075B6J6 115 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 SYNDIG1LA6NDD5 238 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 C3orf70A6NLC5 250 aaPredicted RBP5.52□□□□□ -1.53
LIMA1-203ENST00000547825 TAF4O00268 1085 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 UBDO15205 165 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 CLEC3AO75596 197 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 SERPINA6P08185 405 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 RARBP10826 455 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 SULT1E1P49888 294 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 RAP1GDS1P52306 607 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 TPI1P60174 286 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 SP3Q02447 781 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 MADCAM1Q13477 382 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 TMEM132BQ14DG7 1078 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 BOLA3Q53S33 107 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 XKR3Q5GH77 459 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 CATSPER4Q7RTX7 472 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 DHFR2Q86XF0 187 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 UNC5BQ8IZJ1 945 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 TMEM130Q8N3G9 435 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 TRPV1Q8NER1 839 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 ZNF398Q8TD17 642 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 TFB1MQ8WVM0 346 aaKnown RBP5.52□□□□□ -1.53
LIMA1-203ENST00000547825 MOCOSQ96EN8 888 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 XPNPEP1Q9NQW7 623 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 ABCB10Q9NRK6 738 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 AFF4Q9UHB7 1163 aaKnown RBP5.52□□□□□ -1.53
LIMA1-203ENST00000547825 IPO11Q9UI26 975 aaKnown RBP5.52□□□□□ -1.53
LIMA1-203ENST00000547825 ADAM30Q9UKF2 790 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 TRIM17Q9Y577 477 aa5.52□□□□□ -1.53
LIMA1-203ENST00000547825 hCG_1818297A0A087WSY0 165 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 A0A087WXM4 84 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 ALG1L2C9J202 215 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 MRASO14807 208 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 PRPF4O43172 522 aaKnown RBP eCLIP5.51□□□□□ -1.53
LIMA1-203ENST00000547825 TSC22D2O75157 780 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 HSMCR30P0CW71 290 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 GNAZP19086 355 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 CDH3P22223 829 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 ADSSP30520 456 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 PPM1FP49593 454 aaPredicted RBP5.51□□□□□ -1.53
LIMA1-203ENST00000547825 ARHGDIAP52565 204 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 RAD23AP54725 363 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 HMGCS2P54868 508 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 ACTR3P61158 418 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 ABCE1P61221 599 aaKnown RBP5.51□□□□□ -1.53
LIMA1-203ENST00000547825 FASTKQ14296 549 aaKnown RBP5.51□□□□□ -1.53
LIMA1-203ENST00000547825 STXBP2Q15833 593 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 RSBN1Q5VWQ0 802 aaPredicted RBP5.51□□□□□ -1.53
LIMA1-203ENST00000547825 TMEM198Q66K66 360 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 PAOXQ6QHF9 649 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 CD99L2Q8TCZ2 262 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 PABPC5Q96DU9 382 aaKnown RBP5.51□□□□□ -1.53
LIMA1-203ENST00000547825 PARK7Q99497 189 aaKnown RBP5.51□□□□□ -1.53
LIMA1-203ENST00000547825 STRA6Q9BX79 667 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 COG4Q9H9E3 785 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 AS3MTQ9HBK9 375 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 VTA1Q9NP79 307 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 AVENQ9NQS1 362 aaPredicted RBP5.51□□□□□ -1.53
LIMA1-203ENST00000547825 RAD18Q9NS91 495 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 KIF17Q9P2E2 1029 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 PLLPQ9Y342 182 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 HBS1LQ9Y450 684 aaKnown RBP5.51□□□□□ -1.53
LIMA1-203ENST00000547825 MICAL3Q7RTP6 2002 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 C16orf96A6NNT2 1141 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 GABRDO14764 452 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 TBC1D4O60343 1298 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 FKBP9O95302 570 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 ABHD2P08910 425 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 CYP3A7P24462 503 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 CYP2F1P24903 491 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 FASP25445 335 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms