RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 ARL4CP56559 192 aa4.15□□□□□ -1.75
CCDC38-204ENST00000546816 YWHAZP63104 245 aaKnown RBP4.15□□□□□ -1.75
CCDC38-204ENST00000546816 CHRNDQ07001 517 aa4.15□□□□□ -1.75
CCDC38-204ENST00000546816 TBL3Q12788 808 aaKnown RBP4.15□□□□□ -1.75
CCDC38-204ENST00000546816 TNFAIP1Q13829 316 aa4.15□□□□□ -1.75
CCDC38-204ENST00000546816 RUNX2Q13950 521 aa4.15□□□□□ -1.75
CCDC38-204ENST00000546816 NAA25Q14CX7 972 aa4.15□□□□□ -1.75
CCDC38-204ENST00000546816 B3GNT6Q6ZMB0 384 aa4.15□□□□□ -1.75
CCDC38-204ENST00000546816 NOL8Q76FK4 1167 aaKnown RBP4.15□□□□□ -1.75
CCDC38-204ENST00000546816 LNX1Q8TBB1 728 aaPredicted RBP4.15□□□□□ -1.75
CCDC38-204ENST00000546816 FIG4Q92562 907 aa4.15□□□□□ -1.75
CCDC38-204ENST00000546816 OTULINQ96BN8 352 aa4.15□□□□□ -1.75
CCDC38-204ENST00000546816 CD180Q99467 661 aa4.15□□□□□ -1.75
CCDC38-204ENST00000546816 REEP2Q9BRK0 252 aa4.15□□□□□ -1.75
CCDC38-204ENST00000546816 EGLN1Q9GZT9 426 aa4.15□□□□□ -1.75
CCDC38-204ENST00000546816 GFRA4Q9GZZ7 299 aa4.15□□□□□ -1.75
CCDC38-204ENST00000546816 SIX4Q9UIU6 781 aa4.15□□□□□ -1.75
CCDC38-204ENST00000546816 ZNF711Q9Y462 761 aa4.15□□□□□ -1.75
CCDC38-204ENST00000546816 CGNL1Q0VF96 1302 aa4.15□□□□□ -1.75
CCDC38-204ENST00000546816 A0A0G2JPF8 293 aa4.14□□□□□ -1.75
CCDC38-204ENST00000546816 HNRNPCL3B7ZW38 293 aa4.14□□□□□ -1.75
CCDC38-204ENST00000546816 HNRNPCL1O60812 293 aaKnown RBP4.14□□□□□ -1.75
CCDC38-204ENST00000546816 ZG16O60844 167 aa4.14□□□□□ -1.75
CCDC38-204ENST00000546816 HNRNPCL4P0DMR1 293 aa4.14□□□□□ -1.75
CCDC38-204ENST00000546816 SLC2A4P14672 509 aa4.14□□□□□ -1.75
CCDC38-204ENST00000546816 EDN2P20800 178 aa4.14□□□□□ -1.75
CCDC38-204ENST00000546816 FUT6P51993 359 aa4.14□□□□□ -1.75
CCDC38-204ENST00000546816 ATP13A5Q4VNC0 1218 aa4.14□□□□□ -1.75
CCDC38-204ENST00000546816 FBXO47Q5MNV8 452 aa4.14□□□□□ -1.75
CCDC38-204ENST00000546816 PLEKHA7Q6IQ23 1121 aa4.14□□□□□ -1.75
CCDC38-204ENST00000546816 NOXA1Q86UR1 476 aa4.14□□□□□ -1.75
CCDC38-204ENST00000546816 FAM160B2Q86V87 743 aa4.14□□□□□ -1.75
CCDC38-204ENST00000546816 KLHDC8BQ8IXV7 354 aa4.14□□□□□ -1.75
CCDC38-204ENST00000546816 KIAA2013Q8IYS2 634 aa4.14□□□□□ -1.75
CCDC38-204ENST00000546816 CIARTQ8N365 385 aaPredicted RBP4.14□□□□□ -1.75
CCDC38-204ENST00000546816 MAB21L3Q8N8X9 362 aa4.14□□□□□ -1.75
CCDC38-204ENST00000546816 KBTBD3Q8NAB2 608 aa4.14□□□□□ -1.75
CCDC38-204ENST00000546816 IL17RCQ8NAC3 791 aa4.14□□□□□ -1.75
CCDC38-204ENST00000546816 MXRA8Q9BRK3 442 aa4.14□□□□□ -1.75
CCDC38-204ENST00000546816 DDX4Q9NQI0 724 aaKnown RBP4.14□□□□□ -1.75
CCDC38-204ENST00000546816 SMYD2Q9NRG4 433 aa4.14□□□□□ -1.75
CCDC38-204ENST00000546816 ALKBH4Q9NXW9 302 aa4.14□□□□□ -1.75
CCDC38-204ENST00000546816 CISD1Q9NZ45 108 aaKnown RBP4.14□□□□□ -1.75
CCDC38-204ENST00000546816 KCNS2Q9ULS6 477 aa4.14□□□□□ -1.75
CCDC38-204ENST00000546816 ATXN2Q99700 1313 aaKnown RBP4.14□□□□□ -1.75
CCDC38-204ENST00000546816 IRAK2O43187 625 aa4.13□□□□□ -1.75
CCDC38-204ENST00000546816 PLRG1O43660 514 aaKnown RBP4.13□□□□□ -1.75
CCDC38-204ENST00000546816 APOHP02749 345 aaPredicted RBP4.13□□□□□ -1.75
CCDC38-204ENST00000546816 PCNAP12004 261 aa4.13□□□□□ -1.75
CCDC38-204ENST00000546816 GPTP24298 496 aa4.13□□□□□ -1.75
CCDC38-204ENST00000546816 CHATP28329 748 aa4.13□□□□□ -1.75
CCDC38-204ENST00000546816 STX2P32856 288 aa4.13□□□□□ -1.75
CCDC38-204ENST00000546816 PAPOLAP51003 745 aaKnown RBP4.13□□□□□ -1.75
CCDC38-204ENST00000546816 PPP6R3Q5H9R7 873 aaPredicted RBP4.13□□□□□ -1.75
CCDC38-204ENST00000546816 ZNF667Q5HYK9 610 aa4.13□□□□□ -1.75
CCDC38-204ENST00000546816 WDR45BQ5MNZ6 344 aa4.13□□□□□ -1.75
CCDC38-204ENST00000546816 ANKRD54Q6NXT1 300 aa4.13□□□□□ -1.75
CCDC38-204ENST00000546816 GDPD4Q6W3E5 623 aa4.13□□□□□ -1.75
CCDC38-204ENST00000546816 FOXRED2Q8IWF2 684 aa4.13□□□□□ -1.75
CCDC38-204ENST00000546816 NKAPQ8N5F7 415 aaKnown RBP4.13□□□□□ -1.75
CCDC38-204ENST00000546816 WDSUB1Q8N9V3 476 aa4.13□□□□□ -1.75
CCDC38-204ENST00000546816 RUFY2Q8WXA3 655 aa4.13□□□□□ -1.75
CCDC38-204ENST00000546816 CCT6BQ92526 530 aa4.13□□□□□ -1.75
CCDC38-204ENST00000546816 TMEM19Q96HH6 336 aa4.13□□□□□ -1.75
CCDC38-204ENST00000546816 FEM1CQ96JP0 617 aa4.13□□□□□ -1.75
CCDC38-204ENST00000546816 TTC14Q96N46 770 aa4.13□□□□□ -1.75
CCDC38-204ENST00000546816 DUX3Q96PT4 197 aa4.13□□□□□ -1.75
CCDC38-204ENST00000546816 EYA3Q99504 573 aa4.13□□□□□ -1.75
CCDC38-204ENST00000546816 PTPRHQ9HD43 1115 aa4.13□□□□□ -1.75
CCDC38-204ENST00000546816 C1RLQ9NZP8 487 aa4.13□□□□□ -1.75
CCDC38-204ENST00000546816 PEMTQ9UBM1 199 aa4.13□□□□□ -1.75
CCDC38-204ENST00000546816 NBNO60934 754 aa4.12□□□□□ -1.75
CCDC38-204ENST00000546816 RFPL2O75678 378 aa4.12□□□□□ -1.75
CCDC38-204ENST00000546816 CRYAAP02489 173 aa4.12□□□□□ -1.75
CCDC38-204ENST00000546816 GRIK3Q13003 919 aa4.12□□□□□ -1.75
CCDC38-204ENST00000546816 LRRC8EQ6NSJ5 796 aa4.12□□□□□ -1.75
CCDC38-204ENST00000546816 ADGRG6Q86SQ4 1221 aa4.12□□□□□ -1.75
CCDC38-204ENST00000546816 PLD5Q8N7P1 536 aa4.12□□□□□ -1.75
CCDC38-204ENST00000546816 RND1Q92730 232 aa4.12□□□□□ -1.75
CCDC38-204ENST00000546816 ELP4Q96EB1 424 aa4.12□□□□□ -1.75
CCDC38-204ENST00000546816 ZC3HAV1LQ96H79 300 aaKnown RBP4.12□□□□□ -1.75
CCDC38-204ENST00000546816 SCRT2Q9NQ03 307 aa4.12□□□□□ -1.75
CCDC38-204ENST00000546816 SNTG1Q9NSN8 517 aa4.12□□□□□ -1.75
CCDC38-204ENST00000546816 ZFP57Q9NU63 452 aa4.12□□□□□ -1.75
CCDC38-204ENST00000546816 BABAM1Q9NWV8 329 aa4.12□□□□□ -1.75
CCDC38-204ENST00000546816 CTNNAL1Q9UBT7 734 aa4.12□□□□□ -1.75
CCDC38-204ENST00000546816 TINAGQ9UJW2 476 aa4.12□□□□□ -1.75
CCDC38-204ENST00000546816 VDAC3Q9Y277 283 aa4.12□□□□□ -1.75
CCDC38-204ENST00000546816 TEX22C9J3V5 150 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 P2RY10O00398 339 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 TSPAN3O60637 253 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 TIPRLO75663 272 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 MTA2O94776 668 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 KCNA5P22460 613 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 MCM3P25205 808 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 SLC20A2Q08357 652 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 ITGADQ13349 1161 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 SLC12A1Q13621 1099 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 NEDD9Q14511 834 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 MMEL1Q495T6 779 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms