RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 ECHDC3Q96DC8 303 aa14.39□□□□□ -0.11
TROAP-203ENST00000546735 PDXPQ96GD0 296 aa14.39□□□□□ -0.11
TROAP-203ENST00000546735 HIC2Q96JB3 615 aa14.39□□□□□ -0.11
TROAP-203ENST00000546735 WDR92Q96MX6 357 aa14.39□□□□□ -0.11
TROAP-203ENST00000546735 UBL7Q96S82 380 aaPredicted RBP14.39□□□□□ -0.11
TROAP-203ENST00000546735 EIF3CQ99613 913 aaKnown RBP14.39□□□□□ -0.11
TROAP-203ENST00000546735 ASCL3Q9NQ33 180 aa14.39□□□□□ -0.11
TROAP-203ENST00000546735 MRPL40Q9NQ50 206 aaKnown RBP14.39□□□□□ -0.11
TROAP-203ENST00000546735 RABGEF1Q9UJ41 708 aa14.39□□□□□ -0.11
TROAP-203ENST00000546735 SCINQ9Y6U3 715 aa14.39□□□□□ -0.11
TROAP-203ENST00000546735 COL27A1Q8IZC6 1860 aaPredicted RBP14.38□□□□□ -0.11
TROAP-203ENST00000546735 TMEM202A6NGA9 273 aa14.38□□□□□ -0.11
TROAP-203ENST00000546735 TMEM110-MUSTN1A8MSY1 372 aa14.38□□□□□ -0.11
TROAP-203ENST00000546735 TRAFD1O14545 582 aaPredicted RBP14.38□□□□□ -0.11
TROAP-203ENST00000546735 DXOO77932 396 aaKnown RBP14.38□□□□□ -0.11
TROAP-203ENST00000546735 SERPINC1P01008 464 aa14.38□□□□□ -0.11
TROAP-203ENST00000546735 ELFN1P0C7U0 828 aa14.38□□□□□ -0.11
TROAP-203ENST00000546735 GM2AP17900 193 aa14.38□□□□□ -0.11
TROAP-203ENST00000546735 HCAR3P49019 387 aa14.38□□□□□ -0.11
TROAP-203ENST00000546735 PDX1P52945 283 aa14.38□□□□□ -0.11
TROAP-203ENST00000546735 IQCB1Q15051 598 aa14.38□□□□□ -0.11
TROAP-203ENST00000546735 AGERQ15109 404 aa14.38□□□□□ -0.11
TROAP-203ENST00000546735 ELOCQ15369 112 aa14.38□□□□□ -0.11
TROAP-203ENST00000546735 SFTPA2Q8IWL1 248 aa14.38□□□□□ -0.11
TROAP-203ENST00000546735 PELI3Q8N2H9 469 aa14.38□□□□□ -0.11
TROAP-203ENST00000546735 ARL10Q8N8L6 244 aa14.38□□□□□ -0.11
TROAP-203ENST00000546735 TPCN2Q8NHX9 752 aa14.38□□□□□ -0.11
TROAP-203ENST00000546735 OR1E3Q8WZA6 343 aa14.38□□□□□ -0.11
TROAP-203ENST00000546735 NAT6Q93015 286 aa14.38□□□□□ -0.11
TROAP-203ENST00000546735 CCDC74AQ96AQ1 378 aa14.38□□□□□ -0.11
TROAP-203ENST00000546735 BTBD6Q96KE9 485 aa14.38□□□□□ -0.11
TROAP-203ENST00000546735 PSKH2Q96QS6 385 aa14.38□□□□□ -0.11
TROAP-203ENST00000546735 ISCUQ9H1K1 167 aa14.38□□□□□ -0.11
TROAP-203ENST00000546735 MRPL47Q9HD33 250 aaKnown RBP14.38□□□□□ -0.11
TROAP-203ENST00000546735 GPR34Q9UPC5 381 aa14.38□□□□□ -0.11
TROAP-203ENST00000546735 ASXL3Q9C0F0 2248 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 H3BRJ5 948 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 PEX11BO96011 259 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 TNFP01375 233 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 ALPIP09923 528 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 MYBL1P10243 752 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 RARAP10276 462 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 PCK1P35558 622 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 AP1S1P61966 158 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 NSUN2Q08J23 767 aaKnown RBP eCLIP14.37□□□□□ -0.11
TROAP-203ENST00000546735 SPIDRQ14159 915 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 RFTN1Q14699 578 aaPredicted RBP14.37□□□□□ -0.11
TROAP-203ENST00000546735 PTPRRQ15256 657 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 DPYSL2Q16555 572 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 TDRD12Q587J7 1177 aaKnown RBP14.37□□□□□ -0.11
TROAP-203ENST00000546735 TMCO4Q5TGY1 634 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 HGSNATQ68CP4 663 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 DPPA4Q7L190 304 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 POLNQ7Z5Q5 900 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 PSTKQ8IV42 348 aaKnown RBP14.37□□□□□ -0.11
TROAP-203ENST00000546735 PGBD5Q8N414 524 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 PDCD6IPQ8WUM4 868 aaKnown RBP14.37□□□□□ -0.11
TROAP-203ENST00000546735 KCNE4Q8WWG9 221 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 SCG3Q8WXD2 468 aaKnown RBP14.37□□□□□ -0.11
TROAP-203ENST00000546735 PRR11Q96HE9 360 aaPredicted RBP14.37□□□□□ -0.11
TROAP-203ENST00000546735 FUCA2Q9BTY2 467 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.37□□□□□ -0.11
TROAP-203ENST00000546735 LGR4Q9BXB1 951 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 CPNE5Q9HCH3 593 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 FGF22Q9HCT0 170 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.37□□□□□ -0.11
TROAP-203ENST00000546735 B4GALT6Q9UBX8 382 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 SEPT3Q9UH03 358 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 MOSPD1Q9UJG1 213 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 PCDHGC4Q9Y5F7 938 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 LRRK1Q38SD2 2015 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 IGSF10Q6WRI0 2623 aa14.37□□□□□ -0.11
TROAP-203ENST00000546735 CFAP69A5D8W1 941 aa14.36□□□□□ -0.11
TROAP-203ENST00000546735 CACNB4O00305 520 aaPredicted RBP14.36□□□□□ -0.11
TROAP-203ENST00000546735 KLK10O43240 276 aa14.36□□□□□ -0.11
TROAP-203ENST00000546735 TCEA3O75764 348 aa14.36□□□□□ -0.11
TROAP-203ENST00000546735 RBMS1P29558 406 aaKnown RBP14.36□□□□□ -0.11
TROAP-203ENST00000546735 ARL4AP40617 200 aa14.36□□□□□ -0.11
TROAP-203ENST00000546735 RENBPP51606 427 aa14.36□□□□□ -0.11
TROAP-203ENST00000546735 ERVPABLB-1P60509 514 aa14.36□□□□□ -0.11
TROAP-203ENST00000546735 MAXP61244 160 aa14.36□□□□□ -0.11
TROAP-203ENST00000546735 POLR2LP62875 67 aaKnown RBP14.36□□□□□ -0.11
TROAP-203ENST00000546735 CCL7P80098 99 aa14.36□□□□□ -0.11
TROAP-203ENST00000546735 ZNF235Q14590 738 aa14.36□□□□□ -0.11
TROAP-203ENST00000546735 ACOX1Q15067 660 aa14.36□□□□□ -0.11
TROAP-203ENST00000546735 DENND2CQ68D51 928 aa14.36□□□□□ -0.11
TROAP-203ENST00000546735 TMCO3Q6UWJ1 677 aa14.36□□□□□ -0.11
TROAP-203ENST00000546735 GPR155Q7Z3F1 870 aa14.36□□□□□ -0.11
TROAP-203ENST00000546735 B3GNT8Q7Z7M8 397 aa14.36□□□□□ -0.11
TROAP-203ENST00000546735 GKN2Q86XP6 184 aa14.36□□□□□ -0.11
TROAP-203ENST00000546735 SDR16C5Q8N3Y7 309 aa14.36□□□□□ -0.11
TROAP-203ENST00000546735 LZTR1Q8N653 840 aa14.36□□□□□ -0.11
TROAP-203ENST00000546735 OR56A4Q8NGH8 313 aa14.36□□□□□ -0.11
TROAP-203ENST00000546735 ATL2Q8NHH9 583 aa14.36□□□□□ -0.11
TROAP-203ENST00000546735 SLC39A7Q92504 469 aa14.36□□□□□ -0.11
TROAP-203ENST00000546735 TRIM11Q96F44 468 aa14.36□□□□□ -0.11
TROAP-203ENST00000546735 SLC46A1Q96NT5 459 aa14.36□□□□□ -0.11
TROAP-203ENST00000546735 CSPG4P5Q96PW8 444 aa14.36□□□□□ -0.11
TROAP-203ENST00000546735 RBM15Q96T37 977 aaKnown RBP eCLIP14.36□□□□□ -0.11
TROAP-203ENST00000546735 THAP2Q9H0W7 228 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms