RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 MMP20O60882 483 aa20.57■□□□□ 0.88
HMGA2-211ENST00000545998 TRBC1P01850 177 aa20.57■□□□□ 0.88
HMGA2-211ENST00000545998 NFKBIAP25963 317 aa20.57■□□□□ 0.88
HMGA2-211ENST00000545998 EPHB1P54762 984 aa20.57■□□□□ 0.88
HMGA2-211ENST00000545998 WNT3AP56704 352 aa20.57■□□□□ 0.88
HMGA2-211ENST00000545998 CDK18Q07002 472 aa20.57■□□□□ 0.88
HMGA2-211ENST00000545998 RALGDSQ12967 914 aa20.57■□□□□ 0.88
HMGA2-211ENST00000545998 MPP3Q13368 585 aa20.57■□□□□ 0.88
HMGA2-211ENST00000545998 FGL2Q14314 439 aa20.57■□□□□ 0.88
HMGA2-211ENST00000545998 CYP1B1Q16678 543 aa20.57■□□□□ 0.88
HMGA2-211ENST00000545998 SETMARQ53H47 684 aaPredicted RBP20.57■□□□□ 0.88
HMGA2-211ENST00000545998 SYT10Q6XYQ8 523 aa20.57■□□□□ 0.88
HMGA2-211ENST00000545998 ARHGEF18Q6ZSZ5 1173 aa20.57■□□□□ 0.88
HMGA2-211ENST00000545998 USP45Q70EL2 814 aa20.57■□□□□ 0.88
HMGA2-211ENST00000545998 KDELC2Q7Z4H8 507 aa20.57■□□□□ 0.88
HMGA2-211ENST00000545998 CREG2Q8IUH2 290 aa20.57■□□□□ 0.88
HMGA2-211ENST00000545998 C12orf50Q8NA57 414 aaPredicted RBP20.57■□□□□ 0.88
HMGA2-211ENST00000545998 LPCAT1Q8NF37 534 aa20.57■□□□□ 0.88
HMGA2-211ENST00000545998 KLK6Q92876 244 aa20.57■□□□□ 0.88
HMGA2-211ENST00000545998 MRGPRX2Q96LB1 330 aa20.57■□□□□ 0.88
HMGA2-211ENST00000545998 C1QTNF2Q9BXJ5 285 aa20.57■□□□□ 0.88
HMGA2-211ENST00000545998 ADGRE3Q9BY15 652 aa20.57■□□□□ 0.88
HMGA2-211ENST00000545998 SLC17A9Q9BYT1 436 aa20.57■□□□□ 0.88
HMGA2-211ENST00000545998 MIR1-1HGQ9H1L0 117 aa20.57■□□□□ 0.88
HMGA2-211ENST00000545998 DMXL1Q9Y485 3027 aa20.56■□□□□ 0.88
HMGA2-211ENST00000545998 PTPRZ1P23471 2315 aaPredicted RBP20.56■□□□□ 0.88
HMGA2-211ENST00000545998 LOC285095A0A1B0GVY8 99 aa20.56■□□□□ 0.88
HMGA2-211ENST00000545998 ANKRD66B4E2M5 251 aa20.56■□□□□ 0.88
HMGA2-211ENST00000545998 ANXA9O76027 345 aa20.56■□□□□ 0.88
HMGA2-211ENST00000545998 ALPIP09923 528 aa20.56■□□□□ 0.88
HMGA2-211ENST00000545998 CTPS1P17812 591 aa20.56■□□□□ 0.88
HMGA2-211ENST00000545998 CASQ1P31415 396 aa20.56■□□□□ 0.88
HMGA2-211ENST00000545998 KCNJ1P48048 391 aa20.56■□□□□ 0.88
HMGA2-211ENST00000545998 GRIA4P48058 902 aa20.56■□□□□ 0.88
HMGA2-211ENST00000545998 LIG3P49916 1009 aa20.56■□□□□ 0.88
HMGA2-211ENST00000545998 PTPRRQ15256 657 aa20.56■□□□□ 0.88
HMGA2-211ENST00000545998 KLHDC8BQ8IXV7 354 aa20.56■□□□□ 0.88
HMGA2-211ENST00000545998 NDUFAF2Q8N183 169 aa20.56■□□□□ 0.88
HMGA2-211ENST00000545998 ZCCHC9Q8N567 271 aaKnown RBP20.56■□□□□ 0.88
HMGA2-211ENST00000545998 IFT43Q96FT9 208 aa20.56■□□□□ 0.88
HMGA2-211ENST00000545998 SMIM14Q96QK8 99 aa20.56■□□□□ 0.88
HMGA2-211ENST00000545998 MLPHQ9BV36 600 aaPredicted RBP20.56■□□□□ 0.88
HMGA2-211ENST00000545998 SUSD2Q9UGT4 822 aa20.56■□□□□ 0.88
HMGA2-211ENST00000545998 DMTF1Q9Y222 760 aa20.56■□□□□ 0.88
HMGA2-211ENST00000545998 NPIPB15A6NHN6 443 aaPredicted RBP20.55■□□□□ 0.88
HMGA2-211ENST00000545998 SLC31A1O15431 190 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 LRP3O75074 770 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 METTL18O95568 372 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 IFNB1P01574 187 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 CYP2A6P11509 494 aaPredicted RBP20.55■□□□□ 0.88
HMGA2-211ENST00000545998 VIPR1P32241 457 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 HNF1BP35680 557 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 GEMP55040 296 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 GALNT3Q14435 633 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 CCDC6Q16204 474 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 QPCTQ16769 361 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 PARP6Q2NL67 630 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 DCLK2Q8N568 766 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 GLIS1Q8NBF1 620 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 ASB12Q8WXK4 309 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 CAPZA3Q96KX2 299 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 C16orf45Q96MC5 204 aaPredicted RBP20.55■□□□□ 0.88
HMGA2-211ENST00000545998 PPP1R2P1Q96PQ5 205 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 TM9SF3Q9HD45 589 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 AAR2Q9Y312 384 aaKnown RBP20.55■□□□□ 0.88
HMGA2-211ENST00000545998 CAPN8A6NHC0 703 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 A8MX80 341 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 BCAT2O15382 392 aaPredicted RBP20.55■□□□□ 0.88
HMGA2-211ENST00000545998 GFRA3O60609 400 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 NDST3O95803 873 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 PAK4O96013 591 aaPredicted RBP20.55■□□□□ 0.88
HMGA2-211ENST00000545998 EPOP01588 193 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 C6P13671 934 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 GNSP15586 552 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 LHCGRP22888 699 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 PRPSAP1Q14558 356 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 TTC27Q6P3X3 843 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 LIPIQ6XZB0 460 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 RABEPKQ7Z6M1 372 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 IPMKQ8NFU5 416 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 CEP76Q8TAP6 659 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 MAGOHBQ96A72 148 aaKnown RBP20.55■□□□□ 0.88
HMGA2-211ENST00000545998 RMDN1Q96DB5 314 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 FAM122AQ96E09 287 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 SERAC1Q96JX3 654 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 SLC6A18Q96N87 628 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 LYSMD1Q96S90 227 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 SMOC1Q9H4F8 434 aa20.55■□□□□ 0.88
HMGA2-211ENST00000545998 A0A1B0GTW7 788 aa20.54■□□□□ 0.88
HMGA2-211ENST00000545998 WNT9AO14904 365 aa20.54■□□□□ 0.88
HMGA2-211ENST00000545998 TM7SF2O76062 418 aa20.54■□□□□ 0.88
HMGA2-211ENST00000545998 HEXIM1O94992 359 aaKnown RBP20.54■□□□□ 0.88
HMGA2-211ENST00000545998 ELFN1P0C7U0 828 aa20.54■□□□□ 0.88
HMGA2-211ENST00000545998 ETS1P14921 441 aa20.54■□□□□ 0.88
HMGA2-211ENST00000545998 TGM1P22735 817 aa20.54■□□□□ 0.88
HMGA2-211ENST00000545998 PLA2G5P39877 138 aa20.54■□□□□ 0.88
HMGA2-211ENST00000545998 RACK1P63244 317 aaKnown RBP20.54■□□□□ 0.88
HMGA2-211ENST00000545998 SPEM2Q0P670 501 aa20.54■□□□□ 0.88
HMGA2-211ENST00000545998 SGCGQ13326 291 aa20.54■□□□□ 0.88
HMGA2-211ENST00000545998 CNGA3Q16281 694 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms