RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 TRIM4Q9C037 500 aa16.78■□□□□ 0.28
CPSF7-225ENST00000545934 GANQ9H2C0 597 aa16.78■□□□□ 0.28
CPSF7-225ENST00000545934 FGF22Q9HCT0 170 aa16.78■□□□□ 0.28
CPSF7-225ENST00000545934 RNF215Q9Y6U7 377 aa16.78■□□□□ 0.28
CPSF7-225ENST00000545934 PTPN13Q12923 2485 aa16.78■□□□□ 0.28
CPSF7-225ENST00000545934 A0A1W2PQC6 194 aa16.77■□□□□ 0.28
CPSF7-225ENST00000545934 NUDT21O43809 227 aaKnown RBP16.77■□□□□ 0.28
CPSF7-225ENST00000545934 PCCBP05166 539 aa16.77■□□□□ 0.28
CPSF7-225ENST00000545934 FAM87AP0C7U9 286 aa16.77■□□□□ 0.28
CPSF7-225ENST00000545934 SFTPCP11686 197 aa16.77■□□□□ 0.28
CPSF7-225ENST00000545934 GM2AP17900 193 aa16.77■□□□□ 0.28
CPSF7-225ENST00000545934 XPAP23025 273 aaPredicted RBP16.77■□□□□ 0.28
CPSF7-225ENST00000545934 EPHB2P29323 1055 aa16.77■□□□□ 0.28
CPSF7-225ENST00000545934 B4GALNT1Q00973 533 aa16.77■□□□□ 0.28
CPSF7-225ENST00000545934 SRSF1Q07955 248 aaKnown RBP eCLIP16.77■□□□□ 0.28
CPSF7-225ENST00000545934 RALGDSQ12967 914 aa16.77■□□□□ 0.28
CPSF7-225ENST00000545934 TBR1Q16650 682 aa16.77■□□□□ 0.28
CPSF7-225ENST00000545934 MANEAQ5SRI9 462 aa16.77■□□□□ 0.28
CPSF7-225ENST00000545934 ERAP2Q6P179 960 aa16.77■□□□□ 0.28
CPSF7-225ENST00000545934 ATG14Q6ZNE5 492 aa16.77■□□□□ 0.28
CPSF7-225ENST00000545934 VASH2Q86V25 355 aa16.77■□□□□ 0.28
CPSF7-225ENST00000545934 C17orf82Q86X59 251 aaPredicted RBP16.77■□□□□ 0.28
CPSF7-225ENST00000545934 Q8N9G6 341 aaPredicted RBP16.77■□□□□ 0.28
CPSF7-225ENST00000545934 OR56A4Q8NGH8 313 aa16.77■□□□□ 0.28
CPSF7-225ENST00000545934 HTR3CQ8WXA8 447 aa16.77■□□□□ 0.28
CPSF7-225ENST00000545934 USP7Q93009 1102 aa16.77■□□□□ 0.28
CPSF7-225ENST00000545934 CMKLR1Q99788 373 aa16.77■□□□□ 0.28
CPSF7-225ENST00000545934 ARHGAP9Q9BRR9 750 aa16.77■□□□□ 0.28
CPSF7-225ENST00000545934 FUCA2Q9BTY2 467 aa16.77■□□□□ 0.28
CPSF7-225ENST00000545934 LRRC19Q9H756 370 aa16.77■□□□□ 0.28
CPSF7-225ENST00000545934 MRPL40Q9NQ50 206 aaKnown RBP16.77■□□□□ 0.28
CPSF7-225ENST00000545934 SEPT10Q9P0V9 454 aa16.77■□□□□ 0.28
CPSF7-225ENST00000545934 LRIT1Q9P2V4 623 aa16.77■□□□□ 0.28
CPSF7-225ENST00000545934 ATP8A1Q9Y2Q0 1164 aa16.77■□□□□ 0.28
CPSF7-225ENST00000545934 TLN1Q9Y490 2541 aaKnown RBP16.77■□□□□ 0.28
CPSF7-225ENST00000545934 TCRBV5S1A1TA0A578 114 aa16.76■□□□□ 0.27
CPSF7-225ENST00000545934 TNFRSF10CO14798 259 aa16.76■□□□□ 0.27
CPSF7-225ENST00000545934 GFPT2O94808 682 aa16.76■□□□□ 0.27
CPSF7-225ENST00000545934 KRT3P12035 628 aa16.76■□□□□ 0.27
CPSF7-225ENST00000545934 GPD1P21695 349 aa16.76■□□□□ 0.27
CPSF7-225ENST00000545934 CD82P27701 267 aa16.76■□□□□ 0.27
CPSF7-225ENST00000545934 ERCC5P28715 1186 aaPredicted RBP16.76■□□□□ 0.27
CPSF7-225ENST00000545934 TRIM23P36406 574 aa16.76■□□□□ 0.27
CPSF7-225ENST00000545934 JAM2P57087 298 aa16.76■□□□□ 0.27
CPSF7-225ENST00000545934 BECN1Q14457 450 aa16.76■□□□□ 0.27
CPSF7-225ENST00000545934 C16orf72Q14CZ0 275 aa16.76■□□□□ 0.27
CPSF7-225ENST00000545934 HSP90AA4PQ58FG1 418 aa16.76■□□□□ 0.27
CPSF7-225ENST00000545934 WDR59Q6PJI9 974 aa16.76■□□□□ 0.27
CPSF7-225ENST00000545934 TRIM72Q6ZMU5 477 aa16.76■□□□□ 0.27
CPSF7-225ENST00000545934 ZNF354CQ86Y25 554 aa16.76■□□□□ 0.27
CPSF7-225ENST00000545934 FAM46DQ8NEK8 389 aa16.76■□□□□ 0.27
CPSF7-225ENST00000545934 ECHDC3Q96DC8 303 aa16.76■□□□□ 0.27
CPSF7-225ENST00000545934 TUBGCP5Q96RT8 1024 aa16.76■□□□□ 0.27
CPSF7-225ENST00000545934 PCDHB18PQ96TA0 734 aa16.76■□□□□ 0.27
CPSF7-225ENST00000545934 NCAPGQ9BPX3 1015 aa16.76■□□□□ 0.27
CPSF7-225ENST00000545934 SEMA6CQ9H3T2 930 aa16.76■□□□□ 0.27
CPSF7-225ENST00000545934 UBA2Q9UBT2 640 aaPredicted RBP16.76■□□□□ 0.27
CPSF7-225ENST00000545934 COL12A1Q99715 3063 aa16.76■□□□□ 0.27
CPSF7-225ENST00000545934 SPTA1P02549 2419 aa16.75■□□□□ 0.27
CPSF7-225ENST00000545934 PRKCGP05129 697 aa16.75■□□□□ 0.27
CPSF7-225ENST00000545934 RGRP47804 291 aa16.75■□□□□ 0.27
CPSF7-225ENST00000545934 CSNK1DP48730 415 aa16.75■□□□□ 0.27
CPSF7-225ENST00000545934 ARSDP51689 593 aa16.75■□□□□ 0.27
CPSF7-225ENST00000545934 NR1D2Q14995 579 aa16.75■□□□□ 0.27
CPSF7-225ENST00000545934 DPCR1Q3MIW9 517 aa16.75■□□□□ 0.27
CPSF7-225ENST00000545934 EFHC2Q5JST6 749 aa16.75■□□□□ 0.27
CPSF7-225ENST00000545934 AFMIDQ63HM1 303 aa16.75■□□□□ 0.27
CPSF7-225ENST00000545934 SPECC1LQ69YQ0 1117 aa16.75■□□□□ 0.27
CPSF7-225ENST00000545934 ZNF438Q7Z4V0 828 aa16.75■□□□□ 0.27
CPSF7-225ENST00000545934 TAF8Q7Z7C8 310 aa16.75■□□□□ 0.27
CPSF7-225ENST00000545934 PHF13Q86YI8 300 aaPredicted RBP16.75■□□□□ 0.27
CPSF7-225ENST00000545934 CAMK1DQ8IU85 385 aa16.75■□□□□ 0.27
CPSF7-225ENST00000545934 C3orf20Q8ND61 904 aa16.75■□□□□ 0.27
CPSF7-225ENST00000545934 CCL4L1Q8NHW4 92 aa16.75■□□□□ 0.27
CPSF7-225ENST00000545934 TMEM168Q9H0V1 697 aa16.75■□□□□ 0.27
CPSF7-225ENST00000545934 CATSPERBQ9H7T0 1116 aa16.75■□□□□ 0.27
CPSF7-225ENST00000545934 SAMSN1Q9NSI8 373 aaKnown RBP16.75■□□□□ 0.27
CPSF7-225ENST00000545934 WDR70Q9NW82 654 aa16.75■□□□□ 0.27
CPSF7-225ENST00000545934 FZD10Q9ULW2 581 aa16.75■□□□□ 0.27
CPSF7-225ENST00000545934 SIGLEC16A6NMB1 481 aa16.74■□□□□ 0.27
CPSF7-225ENST00000545934 J3KR12 359 aa16.74■□□□□ 0.27
CPSF7-225ENST00000545934 CACNB4O00305 520 aaPredicted RBP16.74■□□□□ 0.27
CPSF7-225ENST00000545934 FGF10O15520 208 aaPredicted RBP16.74■□□□□ 0.27
CPSF7-225ENST00000545934 CCP110O43303 1012 aa16.74■□□□□ 0.27
CPSF7-225ENST00000545934 B4GAT1O43505 415 aa16.74■□□□□ 0.27
CPSF7-225ENST00000545934 PRAMEF11O60813 436 aa16.74■□□□□ 0.27
CPSF7-225ENST00000545934 RECQL5O94762 991 aaPredicted RBP16.74■□□□□ 0.27
CPSF7-225ENST00000545934 SOX5P35711 763 aa16.74■□□□□ 0.27
CPSF7-225ENST00000545934 MAPK10P53779 464 aa16.74■□□□□ 0.27
CPSF7-225ENST00000545934 AIF1P55008 147 aa16.74■□□□□ 0.27
CPSF7-225ENST00000545934 UBE2HP62256 183 aa16.74■□□□□ 0.27
CPSF7-225ENST00000545934 CYP4F2P78329 520 aa16.74■□□□□ 0.27
CPSF7-225ENST00000545934 CLCA4Q14CN2 919 aa16.74■□□□□ 0.27
CPSF7-225ENST00000545934 CLPPQ16740 277 aaPredicted RBP16.74■□□□□ 0.27
CPSF7-225ENST00000545934 LIPIQ6XZB0 460 aa16.74■□□□□ 0.27
CPSF7-225ENST00000545934 ZNF574Q6ZN55 896 aaPredicted RBP16.74■□□□□ 0.27
CPSF7-225ENST00000545934 PELI3Q8N2H9 469 aa16.74■□□□□ 0.27
CPSF7-225ENST00000545934 ZSCAN1Q8NBB4 408 aa16.74■□□□□ 0.27
CPSF7-225ENST00000545934 LGR4Q9BXB1 951 aa16.74■□□□□ 0.27
CPSF7-225ENST00000545934 SLC12A9Q9BXP2 914 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms