RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 DEPDC7Q96QD5 511 aa21.24■□□□□ 0.99
SCARB1-210ENST00000545493 APOOQ9BUR5 198 aa21.24■□□□□ 0.99
SCARB1-210ENST00000545493 SLC13A1Q9BZW2 595 aa21.24■□□□□ 0.99
SCARB1-210ENST00000545493 IP6K2Q9UHH9 426 aa21.24■□□□□ 0.99
SCARB1-210ENST00000545493 CFAP69A5D8W1 941 aa21.23■□□□□ 0.99
SCARB1-210ENST00000545493 CASC3O15234 703 aaKnown RBP21.23■□□□□ 0.99
SCARB1-210ENST00000545493 MAFKO60675 156 aa21.23■□□□□ 0.99
SCARB1-210ENST00000545493 CSO75390 466 aaKnown RBP21.23■□□□□ 0.99
SCARB1-210ENST00000545493 CD48P09326 243 aa21.23■□□□□ 0.99
SCARB1-210ENST00000545493 ELFN1P0C7U0 828 aa21.23■□□□□ 0.99
SCARB1-210ENST00000545493 HK3P52790 923 aa21.23■□□□□ 0.99
SCARB1-210ENST00000545493 MTM1Q13496 603 aa21.23■□□□□ 0.99
SCARB1-210ENST00000545493 ZSCAN23Q3MJ62 389 aa21.23■□□□□ 0.99
SCARB1-210ENST00000545493 PERM1Q5SV97 790 aa21.23■□□□□ 0.99
SCARB1-210ENST00000545493 FAXCQ5TGI0 409 aa21.23■□□□□ 0.99
SCARB1-210ENST00000545493 ALKBH5Q6P6C2 394 aaKnown RBP21.23■□□□□ 0.99
SCARB1-210ENST00000545493 LIPIQ6XZB0 460 aa21.23■□□□□ 0.99
SCARB1-210ENST00000545493 ATPAF2Q8N5M1 289 aa21.23■□□□□ 0.99
SCARB1-210ENST00000545493 SPOCK2Q92563 424 aa21.23■□□□□ 0.99
SCARB1-210ENST00000545493 TSACCQ96A04 125 aaPredicted RBP21.23■□□□□ 0.99
SCARB1-210ENST00000545493 MGME1Q9BQP7 344 aa21.23■□□□□ 0.99
SCARB1-210ENST00000545493 NCKIPSDQ9NZQ3 722 aa21.23■□□□□ 0.99
SCARB1-210ENST00000545493 B4GALT6Q9UBX8 382 aa21.23■□□□□ 0.99
SCARB1-210ENST00000545493 CPED1A4D0V7 1026 aa21.22■□□□□ 0.99
SCARB1-210ENST00000545493 YY2O15391 372 aa21.22■□□□□ 0.99
SCARB1-210ENST00000545493 HTRA2O43464 458 aaPredicted RBP21.22■□□□□ 0.99
SCARB1-210ENST00000545493 MFSD11O43934 449 aa21.22■□□□□ 0.99
SCARB1-210ENST00000545493 RECQL5O94762 991 aaPredicted RBP21.22■□□□□ 0.99
SCARB1-210ENST00000545493 IL4RP24394 825 aa21.22■□□□□ 0.99
SCARB1-210ENST00000545493 CASP14P31944 242 aa21.22■□□□□ 0.99
SCARB1-210ENST00000545493 EIF2S3P41091 472 aaKnown RBP21.22■□□□□ 0.99
SCARB1-210ENST00000545493 RENBPP51606 427 aa21.22■□□□□ 0.99
SCARB1-210ENST00000545493 TCEA2Q15560 299 aa21.22■□□□□ 0.99
SCARB1-210ENST00000545493 ENPP7Q6UWV6 458 aa21.22■□□□□ 0.99
SCARB1-210ENST00000545493 HID1Q8IV36 788 aa21.22■□□□□ 0.99
SCARB1-210ENST00000545493 PELI3Q8N2H9 469 aa21.22■□□□□ 0.99
SCARB1-210ENST00000545493 PCDH19Q8TAB3 1148 aa21.22■□□□□ 0.99
SCARB1-210ENST00000545493 ZNF564Q8TBZ8 553 aaPredicted RBP21.22■□□□□ 0.99
SCARB1-210ENST00000545493 FAM71BQ8TC56 605 aa21.22■□□□□ 0.99
SCARB1-210ENST00000545493 KLQ9UEF7 1012 aa21.22■□□□□ 0.99
SCARB1-210ENST00000545493 LUC7L2Q9Y383 392 aaKnown RBP21.22■□□□□ 0.99
SCARB1-210ENST00000545493 TMEM110-MUSTN1A8MSY1 372 aa21.21■□□□□ 0.99
SCARB1-210ENST00000545493 SOCS5O75159 536 aa21.21■□□□□ 0.99
SCARB1-210ENST00000545493 ANXA6P08133 673 aa21.21■□□□□ 0.99
SCARB1-210ENST00000545493 ITPKBP27987 946 aa21.21■□□□□ 0.99
SCARB1-210ENST00000545493 SERPINB6P35237 376 aa21.21■□□□□ 0.99
SCARB1-210ENST00000545493 HSPA9P38646 679 aaKnown RBP21.21■□□□□ 0.99
SCARB1-210ENST00000545493 ABCG1P45844 678 aa21.21■□□□□ 0.99
SCARB1-210ENST00000545493 CDH6P55285 790 aa21.21■□□□□ 0.99
SCARB1-210ENST00000545493 KIAA1024LP59773 190 aa21.21■□□□□ 0.99
SCARB1-210ENST00000545493 MAXP61244 160 aa21.21■□□□□ 0.99
SCARB1-210ENST00000545493 TRAF2Q12933 501 aa21.21■□□□□ 0.99
SCARB1-210ENST00000545493 MMRN1Q13201 1228 aa21.21■□□□□ 0.99
SCARB1-210ENST00000545493 TBC1D25Q3MII6 688 aa21.21■□□□□ 0.99
SCARB1-210ENST00000545493 CCDC122Q5T0U0 273 aa21.21■□□□□ 0.99
SCARB1-210ENST00000545493 FSTL5Q8N475 847 aaPredicted RBP21.21■□□□□ 0.99
SCARB1-210ENST00000545493 KYQ8NBH2 561 aa21.21■□□□□ 0.99
SCARB1-210ENST00000545493 FUBP1Q96AE4 644 aaKnown RBP21.21■□□□□ 0.99
SCARB1-210ENST00000545493 WDR92Q96MX6 357 aa21.21■□□□□ 0.99
SCARB1-210ENST00000545493 NUDCD1Q96RS6 583 aa21.21■□□□□ 0.99
SCARB1-210ENST00000545493 XPO4Q9C0E2 1151 aaKnown RBP21.21■□□□□ 0.99
SCARB1-210ENST00000545493 RCOR3Q9P2K3 495 aaPredicted RBP21.21■□□□□ 0.99
SCARB1-210ENST00000545493 RP1P56715 2156 aa21.21■□□□□ 0.99
SCARB1-210ENST00000545493 BPTFQ12830 3046 aa21.2■□□□□ 0.98
SCARB1-210ENST00000545493 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.2■□□□□ 0.98
SCARB1-210ENST00000545493 RASGRP1O95267 797 aa21.2■□□□□ 0.98
SCARB1-210ENST00000545493 CPP00450 1065 aa21.2■□□□□ 0.98
SCARB1-210ENST00000545493 MPOP05164 745 aa21.2■□□□□ 0.98
SCARB1-210ENST00000545493 HTR1BP28222 390 aa21.2■□□□□ 0.98
SCARB1-210ENST00000545493 BLKP51451 505 aa21.2■□□□□ 0.98
SCARB1-210ENST00000545493 ARSEP51690 589 aa21.2■□□□□ 0.98
SCARB1-210ENST00000545493 PDX1P52945 283 aa21.2■□□□□ 0.98
SCARB1-210ENST00000545493 SRP54P61011 504 aaKnown RBP21.2■□□□□ 0.98
SCARB1-210ENST00000545493 KRT81Q14533 505 aa21.2■□□□□ 0.98
SCARB1-210ENST00000545493 NFKBIBQ15653 356 aa21.2■□□□□ 0.98
SCARB1-210ENST00000545493 CNGA3Q16281 694 aa21.2■□□□□ 0.98
SCARB1-210ENST00000545493 PACSIN1Q9BY11 444 aa21.2■□□□□ 0.98
SCARB1-210ENST00000545493 NOD2Q9HC29 1040 aa21.2■□□□□ 0.98
SCARB1-210ENST00000545493 FGF22Q9HCT0 170 aa21.2■□□□□ 0.98
SCARB1-210ENST00000545493 PCDHGC4Q9Y5F7 938 aa21.2■□□□□ 0.98
SCARB1-210ENST00000545493 A0A1W2PNU3 283 aaPredicted RBP21.19■□□□□ 0.98
SCARB1-210ENST00000545493 TMEM202A6NGA9 273 aa21.19■□□□□ 0.98
SCARB1-210ENST00000545493 A8MX80 341 aa21.19■□□□□ 0.98
SCARB1-210ENST00000545493 USP12O75317 370 aa21.19■□□□□ 0.98
SCARB1-210ENST00000545493 LHCGRP22888 699 aa21.19■□□□□ 0.98
SCARB1-210ENST00000545493 HNRNPH3P31942 346 aaKnown RBP21.19■□□□□ 0.98
SCARB1-210ENST00000545493 GJC1P36383 396 aa21.19■□□□□ 0.98
SCARB1-210ENST00000545493 MMP13P45452 471 aa21.19■□□□□ 0.98
SCARB1-210ENST00000545493 POLR2LP62875 67 aaKnown RBP21.19■□□□□ 0.98
SCARB1-210ENST00000545493 GABREP78334 506 aa21.19■□□□□ 0.98
SCARB1-210ENST00000545493 DPYSL3Q14195 570 aa21.19■□□□□ 0.98
SCARB1-210ENST00000545493 ELOCQ15369 112 aa21.19■□□□□ 0.98
SCARB1-210ENST00000545493 ISXQ2M1V0 245 aa21.19■□□□□ 0.98
SCARB1-210ENST00000545493 NCBP2-AS2Q69YL0 99 aa21.19■□□□□ 0.98
SCARB1-210ENST00000545493 ESRP1Q6NXG1 681 aaKnown RBP21.19■□□□□ 0.98
SCARB1-210ENST00000545493 PAF1Q8N7H5 531 aa21.19■□□□□ 0.98
SCARB1-210ENST00000545493 ARL10Q8N8L6 244 aa21.19■□□□□ 0.98
SCARB1-210ENST00000545493 OR1E3Q8WZA6 343 aa21.19■□□□□ 0.98
SCARB1-210ENST00000545493 NAT6Q93015 286 aa21.19■□□□□ 0.98
SCARB1-210ENST00000545493 ABCG4Q9H172 646 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms