RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 EPHA10Q5JZY3 1008 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 C10orf76Q5T2E6 689 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 TMEM154Q6P9G4 183 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 SARM1Q6SZW1 724 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 SERPINA13PQ6UXR4 307 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 DENND5BQ6ZUT9 1274 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 TRIM74Q86UV6 250 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 TRIM73Q86UV7 250 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 LINC00346Q8IVM7 164 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 NEK9Q8TD19 979 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 POMGNT1Q8WZA1 660 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 PABPC5Q96DU9 382 aaKnown RBP4.28□□□□□ -1.72
SNHG1-222ENST00000545308 C1orf74Q96LT6 269 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 FRG2BQ96QU4 278 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 FCRL5Q96RD9 977 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 MAK16Q9BXY0 300 aaKnown RBP4.28□□□□□ -1.72
SNHG1-222ENST00000545308 PLEKHA4Q9H4M7 779 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 SH2D4AQ9H788 454 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 ZNF304Q9HCX3 659 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 SEMA4GQ9NTN9 838 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 FBXO40Q9UH90 709 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 TNFSF13BQ9Y275 285 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 PCDHGB5Q9Y5G0 923 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 RGPD1P0DJD0 1748 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 BCL9LQ86UU0 1499 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 RALGAPBQ86X10 1494 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 ZFYVE9O95405 1425 aa4.28□□□□□ -1.72
SNHG1-222ENST00000545308 NINLQ9Y2I6 1382 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 GCC2Q8IWJ2 1684 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 TMEM247A6NEH6 219 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 A8MV72 311 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-222ENST00000545308 EIF3CLB5ME19 914 aaKnown RBP4.27□□□□□ -1.73
SNHG1-222ENST00000545308 NPIPB11E5RHQ5 1161 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 RBMXL2O75526 392 aaKnown RBP4.27□□□□□ -1.73
SNHG1-222ENST00000545308 IL1AP01583 271 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 RPN1P04843 607 aaKnown RBP4.27□□□□□ -1.73
SNHG1-222ENST00000545308 PRR35P0CG20 571 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 SLC2A4P14672 509 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 GABRB1P18505 474 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 ITGB6P18564 788 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 HOXA7P31268 230 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-222ENST00000545308 RARRES1P49788 294 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 GNAQP50148 359 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 CYP2J2P51589 502 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 HSD17B4P51659 736 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 PPP5CP53041 499 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 CLDN2P57739 230 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 CALD1Q05682 793 aaKnown RBP4.27□□□□□ -1.73
SNHG1-222ENST00000545308 SLC18A2Q05940 514 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 MTA1Q13330 715 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 TMEM266Q2M3C6 531 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 ASTE1Q2TB18 679 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-222ENST00000545308 TSTD2Q5T7W7 516 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 GPR139Q6DWJ6 353 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 KIAA0930Q6ICG6 404 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-222ENST00000545308 CEP85Q6P2H3 762 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 TSSK4Q6SA08 328 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 CRELD2Q6UXH1 353 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-222ENST00000545308 RBM44Q6ZP01 1051 aaKnown RBP4.27□□□□□ -1.73
SNHG1-222ENST00000545308 DHX40Q8IX18 779 aaKnown RBP4.27□□□□□ -1.73
SNHG1-222ENST00000545308 SRRM1Q8IYB3 904 aaKnown RBP4.27□□□□□ -1.73
SNHG1-222ENST00000545308 C16orf71Q8IYS4 520 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-222ENST00000545308 FAR1Q8WVX9 515 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 JAKMIP2Q96AA8 810 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 SLC22A18Q96BI1 424 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 TEFMQ96QE5 360 aaKnown RBP4.27□□□□□ -1.73
SNHG1-222ENST00000545308 SIL1Q9H173 461 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 NDST4Q9H3R1 872 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 SLC6A13Q9NSD5 602 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 MRGBPQ9NV56 204 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 PLK2Q9NYY3 685 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 MORF4L1Q9UBU8 362 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 CNOT8Q9UFF9 292 aaKnown RBP4.27□□□□□ -1.73
SNHG1-222ENST00000545308 HAO1Q9UJM8 370 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.27□□□□□ -1.73
SNHG1-222ENST00000545308 FAM169AQ9Y6X4 670 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 TMEM131LA2VDJ0 1609 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 LAMC1P11047 1609 aa4.27□□□□□ -1.73
SNHG1-222ENST00000545308 COL22A1Q8NFW1 1626 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-222ENST00000545308 COL3A1P02461 1466 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-222ENST00000545308 C1orf167Q5SNV9 1468 aa4.26□□□□□ -1.73
SNHG1-222ENST00000545308 CYP2D7A0A087X1C5 515 aa4.26□□□□□ -1.73
SNHG1-222ENST00000545308 A0A1W2PRG0 241 aa4.26□□□□□ -1.73
SNHG1-222ENST00000545308 FAM157AC9JC47 383 aa4.26□□□□□ -1.73
SNHG1-222ENST00000545308 MSI1O43347 362 aaKnown RBP4.26□□□□□ -1.73
SNHG1-222ENST00000545308 C1QL1O75973 258 aa4.26□□□□□ -1.73
SNHG1-222ENST00000545308 RB1P06400 928 aa4.26□□□□□ -1.73
SNHG1-222ENST00000545308 APOA4P06727 396 aa4.26□□□□□ -1.73
SNHG1-222ENST00000545308 NHLRC4P0CG21 123 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-222ENST00000545308 CACNA2D1P54289 1103 aa4.26□□□□□ -1.73
SNHG1-222ENST00000545308 F2RL1P55085 397 aa4.26□□□□□ -1.73
SNHG1-222ENST00000545308 HDAC4P56524 1084 aa4.26□□□□□ -1.73
SNHG1-222ENST00000545308 PKP1Q13835 747 aa4.26□□□□□ -1.73
SNHG1-222ENST00000545308 FGFBP1Q14512 234 aa4.26□□□□□ -1.73
SNHG1-222ENST00000545308 PCLAFQ15004 111 aa4.26□□□□□ -1.73
SNHG1-222ENST00000545308 COL28A1Q2UY09 1125 aa4.26□□□□□ -1.73
SNHG1-222ENST00000545308 GARNL3Q5VVW2 1013 aa4.26□□□□□ -1.73
SNHG1-222ENST00000545308 TMEM268Q5VZI3 342 aa4.26□□□□□ -1.73
SNHG1-222ENST00000545308 JADE1Q6IE81 842 aa4.26□□□□□ -1.73
SNHG1-222ENST00000545308 FAM83HQ6ZRV2 1179 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms