RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 VPS36Q86VN1 386 aa16.35■□□□□ 0.21
DDX55-212ENST00000544738 LZTR1Q8N653 840 aa16.35■□□□□ 0.21
DDX55-212ENST00000544738 BTN2A2Q8WVV5 523 aa16.35■□□□□ 0.21
DDX55-212ENST00000544738 SYN2Q92777 582 aaPredicted RBP16.35■□□□□ 0.21
DDX55-212ENST00000544738 CENPTQ96BT3 561 aa16.35■□□□□ 0.21
DDX55-212ENST00000544738 IQCDQ96DY2 449 aa16.35■□□□□ 0.21
DDX55-212ENST00000544738 ZNF641Q96N77 438 aaPredicted RBP16.35■□□□□ 0.21
DDX55-212ENST00000544738 TUBGCP5Q96RT8 1024 aa16.35■□□□□ 0.21
DDX55-212ENST00000544738 SLC39A8Q9C0K1 460 aa16.35■□□□□ 0.21
DDX55-212ENST00000544738 ISCUQ9H1K1 167 aa16.35■□□□□ 0.21
DDX55-212ENST00000544738 SUV39H2Q9H5I1 410 aa16.35■□□□□ 0.21
DDX55-212ENST00000544738 PDFQ9HBH1 243 aa16.35■□□□□ 0.21
DDX55-212ENST00000544738 CSNK1G3Q9Y6M4 447 aa16.35■□□□□ 0.21
DDX55-212ENST00000544738 USP9YO00507 2555 aaPredicted RBP16.34■□□□□ 0.21
DDX55-212ENST00000544738 KIF26BQ2KJY2 2108 aa16.34■□□□□ 0.21
DDX55-212ENST00000544738 CREBBPQ92793 2442 aa16.34■□□□□ 0.21
DDX55-212ENST00000544738 A0A1W2PQJ5 194 aa16.34■□□□□ 0.21
DDX55-212ENST00000544738 J3KR12 359 aa16.34■□□□□ 0.21
DDX55-212ENST00000544738 LZTS3O60299 673 aaPredicted RBP16.34■□□□□ 0.21
DDX55-212ENST00000544738 MMP20O60882 483 aa16.34■□□□□ 0.21
DDX55-212ENST00000544738 LRCH4O75427 683 aa16.34■□□□□ 0.21
DDX55-212ENST00000544738 ITGB2P05107 769 aa16.34■□□□□ 0.21
DDX55-212ENST00000544738 SKILP12757 684 aa16.34■□□□□ 0.21
DDX55-212ENST00000544738 ERCC2P18074 760 aa16.34■□□□□ 0.21
DDX55-212ENST00000544738 PCK1P35558 622 aa16.34■□□□□ 0.21
DDX55-212ENST00000544738 PAPOLAP51003 745 aaKnown RBP16.34■□□□□ 0.21
DDX55-212ENST00000544738 PFN3P60673 137 aa16.34■□□□□ 0.21
DDX55-212ENST00000544738 YPEL5P62699 121 aa16.34■□□□□ 0.21
DDX55-212ENST00000544738 SRSF6Q13247 344 aaKnown RBP16.34■□□□□ 0.21
DDX55-212ENST00000544738 TGIF1Q15583 401 aa16.34■□□□□ 0.21
DDX55-212ENST00000544738 BOLA3Q53S33 107 aa16.34■□□□□ 0.21
DDX55-212ENST00000544738 TDRD12Q587J7 1177 aaKnown RBP16.34■□□□□ 0.21
DDX55-212ENST00000544738 CFAP58Q5T655 872 aa16.34■□□□□ 0.21
DDX55-212ENST00000544738 BRAT1Q6PJG6 821 aa16.34■□□□□ 0.21
DDX55-212ENST00000544738 CLEC14AQ86T13 490 aa16.34■□□□□ 0.21
DDX55-212ENST00000544738 NETO2Q8NC67 525 aa16.34■□□□□ 0.21
DDX55-212ENST00000544738 CELF6Q96J87 481 aaKnown RBP16.34■□□□□ 0.21
DDX55-212ENST00000544738 EXOC2Q96KP1 924 aa16.34■□□□□ 0.21
DDX55-212ENST00000544738 PEBP4Q96S96 227 aa16.34■□□□□ 0.21
DDX55-212ENST00000544738 KCTD15Q96SI1 283 aaPredicted RBP16.34■□□□□ 0.21
DDX55-212ENST00000544738 ZWILCHQ9H900 591 aa16.34■□□□□ 0.21
DDX55-212ENST00000544738 NCKIPSDQ9NZQ3 722 aa16.34■□□□□ 0.21
DDX55-212ENST00000544738 MYO1AQ9UBC5 1043 aa16.34■□□□□ 0.21
DDX55-212ENST00000544738 NBPF19A0A087WUL8 3843 aa16.33■□□□□ 0.21
DDX55-212ENST00000544738 TSPAN11A1L157 253 aa16.33■□□□□ 0.2
DDX55-212ENST00000544738 SYCE3A1L190 88 aa16.33■□□□□ 0.2
DDX55-212ENST00000544738 PALMO75781 387 aa16.33■□□□□ 0.2
DDX55-212ENST00000544738 UBASH3AP57075 661 aa16.33■□□□□ 0.2
DDX55-212ENST00000544738 FANCCQ00597 558 aa16.33■□□□□ 0.2
DDX55-212ENST00000544738 RFTN1Q14699 578 aaPredicted RBP16.33■□□□□ 0.2
DDX55-212ENST00000544738 UGP2Q16851 508 aa16.33■□□□□ 0.2
DDX55-212ENST00000544738 TMEM52BQ4KMG9 183 aa16.33■□□□□ 0.2
DDX55-212ENST00000544738 LRRC73Q5JTD7 316 aa16.33■□□□□ 0.2
DDX55-212ENST00000544738 AFMIDQ63HM1 303 aa16.33■□□□□ 0.2
DDX55-212ENST00000544738 ERAP2Q6P179 960 aa16.33■□□□□ 0.2
DDX55-212ENST00000544738 JAMLQ86YT9 394 aa16.33■□□□□ 0.2
DDX55-212ENST00000544738 ZNF548Q8NEK5 533 aaPredicted RBP16.33■□□□□ 0.2
DDX55-212ENST00000544738 TPCN2Q8NHX9 752 aa16.33■□□□□ 0.2
DDX55-212ENST00000544738 TRIM7Q9C029 511 aa16.33■□□□□ 0.2
DDX55-212ENST00000544738 ATP13A3Q9H7F0 1226 aa16.33■□□□□ 0.2
DDX55-212ENST00000544738 SYNDIG1Q9H7V2 258 aa16.33■□□□□ 0.2
DDX55-212ENST00000544738 CBX8Q9HC52 389 aa16.33■□□□□ 0.2
DDX55-212ENST00000544738 TEP1Q99973 2627 aaKnown RBP16.33■□□□□ 0.2
DDX55-212ENST00000544738 TMEM110-MUSTN1A8MSY1 372 aa16.32■□□□□ 0.2
DDX55-212ENST00000544738 GOLGA6L19H0YKK7 550 aa16.32■□□□□ 0.2
DDX55-212ENST00000544738 TPP1O14773 563 aa16.32■□□□□ 0.2
DDX55-212ENST00000544738 CASC3O15234 703 aaKnown RBP16.32■□□□□ 0.2
DDX55-212ENST00000544738 INSIG1O15503 277 aa16.32■□□□□ 0.2
DDX55-212ENST00000544738 AQP9O43315 295 aa16.32■□□□□ 0.2
DDX55-212ENST00000544738 PIGNO95427 931 aa16.32■□□□□ 0.2
DDX55-212ENST00000544738 JUNDP17535 347 aa16.32■□□□□ 0.2
DDX55-212ENST00000544738 CR2P20023 1033 aa16.32■□□□□ 0.2
DDX55-212ENST00000544738 SERPINA4P29622 427 aa16.32■□□□□ 0.2
DDX55-212ENST00000544738 SLC5A2P31639 672 aa16.32■□□□□ 0.2
DDX55-212ENST00000544738 ARL4AP40617 200 aa16.32■□□□□ 0.2
DDX55-212ENST00000544738 RENBPP51606 427 aa16.32■□□□□ 0.2
DDX55-212ENST00000544738 ZBED6P86452 979 aa16.32■□□□□ 0.2
DDX55-212ENST00000544738 IL10RBQ08334 325 aa16.32■□□□□ 0.2
DDX55-212ENST00000544738 NSUN2Q08J23 767 aaKnown RBP eCLIP16.32■□□□□ 0.2
DDX55-212ENST00000544738 PIGHQ14442 188 aaPredicted RBP16.32■□□□□ 0.2
DDX55-212ENST00000544738 ZCCHC8Q6NZY4 707 aaKnown RBP16.32■□□□□ 0.2
DDX55-212ENST00000544738 CYP4V2Q6ZWL3 525 aaPredicted RBP16.32■□□□□ 0.2
DDX55-212ENST00000544738 SRLQ86TD4 932 aa16.32■□□□□ 0.2
DDX55-212ENST00000544738 LUZP1Q86V48 1076 aa16.32■□□□□ 0.2
DDX55-212ENST00000544738 TBATAQ96M53 351 aa16.32■□□□□ 0.2
DDX55-212ENST00000544738 SEMA3CQ99985 751 aa16.32■□□□□ 0.2
DDX55-212ENST00000544738 WRAP53Q9BUR4 548 aaKnown RBP16.32■□□□□ 0.2
DDX55-212ENST00000544738 CINPQ9BW66 212 aaPredicted RBP16.32■□□□□ 0.2
DDX55-212ENST00000544738 SP110Q9HB58 689 aa16.32■□□□□ 0.2
DDX55-212ENST00000544738 CWC15Q9P013 229 aaKnown RBP16.32■□□□□ 0.2
DDX55-212ENST00000544738 SPASTQ9UBP0 616 aa16.32■□□□□ 0.2
DDX55-212ENST00000544738 CCDC187A0A096LP49 1063 aa16.31■□□□□ 0.2
DDX55-212ENST00000544738 H3BRJ5 948 aa16.31■□□□□ 0.2
DDX55-212ENST00000544738 DFFAO00273 331 aa16.31■□□□□ 0.2
DDX55-212ENST00000544738 MUSKO15146 869 aa16.31■□□□□ 0.2
DDX55-212ENST00000544738 BUB1BO60566 1050 aaPredicted RBP16.31■□□□□ 0.2
DDX55-212ENST00000544738 PPFIA2O75334 1257 aa16.31■□□□□ 0.2
DDX55-212ENST00000544738 SERPING1P05155 500 aa16.31■□□□□ 0.2
DDX55-212ENST00000544738 ITGA2BP08514 1039 aa16.31■□□□□ 0.2
DDX55-212ENST00000544738 PTMSP20962 102 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms