RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 BBS12Q6ZW61 710 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 LRRTM4Q86VH4 590 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 TMC8Q8IU68 726 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 OIT3Q8WWZ8 545 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 HERVK_113Q902F9 699 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 ATOH1Q92858 354 aaPredicted RBP4.23□□□□□ -1.73
MDM2-229ENST00000543046 SAAL1Q96ER3 474 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 TBATAQ96M53 351 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 SLX1AQ9BQ83 275 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 CRACR2AQ9BSW2 395 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 TUBB2BQ9BVA1 445 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 IQCGQ9H095 443 aaKnown RBP4.23□□□□□ -1.73
MDM2-229ENST00000543046 LMAN2LQ9H0V9 348 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 MROH8Q9H579 483 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 ZCCHC17Q9NP64 241 aaKnown RBP4.23□□□□□ -1.73
MDM2-229ENST00000543046 ENTPD7Q9NQZ7 604 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 ATP8A2Q9NTI2 1148 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 PDRG1Q9NUG6 133 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 SWAP70Q9UH65 585 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 SUN2Q9UH99 717 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 GGA2Q9UJY4 613 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 ODF2LQ9ULJ1 636 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 CNPY2Q9Y2B0 182 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 ATP6V1DQ9Y5K8 247 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 CLTCL1P53675 1640 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 POLR3AO14802 1390 aaPredicted RBP4.23□□□□□ -1.73
MDM2-229ENST00000543046 FGD5Q6ZNL6 1462 aa4.23□□□□□ -1.73
MDM2-229ENST00000543046 FAM135AQ9P2D6 1515 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 LAMC1P11047 1609 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 MS4A18H0YCH9 400 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 EBAG9O00559 213 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 RGS14O43566 566 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 AHCYL1O43865 530 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 RTN3O95197 1032 aaPredicted RBP4.22□□□□□ -1.73
MDM2-229ENST00000543046 CLDN7O95471 211 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 SERPINC1P01008 464 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 CHRM4P08173 479 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 MMP3P08254 477 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 ALDH1B1P30837 517 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 CDKN2AP42771 156 aaKnown RBP4.22□□□□□ -1.73
MDM2-229ENST00000543046 THBS3P49746 956 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 CCR5P51681 352 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 NANOS2P60321 138 aaKnown RBP4.22□□□□□ -1.73
MDM2-229ENST00000543046 G3BP1Q13283 466 aaKnown RBP eCLIP4.22□□□□□ -1.73
MDM2-229ENST00000543046 PLCB4Q15147 1175 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 ME3Q16798 604 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 WDR45BQ5MNZ6 344 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 ATG16L1Q676U5 607 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 CYP26C1Q6V0L0 522 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 RBM43Q6ZSC3 357 aaKnown RBP4.22□□□□□ -1.73
MDM2-229ENST00000543046 Q6ZSV7 163 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 RSRC2Q7L4I2 434 aaKnown RBP4.22□□□□□ -1.73
MDM2-229ENST00000543046 ZNF367Q7RTV3 350 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.22□□□□□ -1.73
MDM2-229ENST00000543046 CCDC170Q8IYT3 715 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 PAF1Q8N7H5 531 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 DNAAF1Q8NEP3 725 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 IL17REQ8NFR9 667 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 OR4N2Q8NGD1 307 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 B4GALNT2Q8NHY0 566 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 SLC35F5Q8WV83 523 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 ZFAND2BQ8WV99 257 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 HSPH1Q92598 858 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 ZKSCAN4Q969J2 545 aaPredicted RBP4.22□□□□□ -1.73
MDM2-229ENST00000543046 LYZL4Q96KX0 146 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 UBXN10Q96LJ8 280 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 APOLD1Q96LR9 279 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 CLSTN3Q9BQT9 956 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 JPH2Q9BR39 696 aaPredicted RBP4.22□□□□□ -1.73
MDM2-229ENST00000543046 LHPPQ9H008 270 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 TAOK3Q9H2K8 898 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 VIPAS39Q9H9C1 493 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 HIF1ANQ9NWT6 349 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 ALKBH4Q9NXW9 302 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 PLK2Q9NYY3 685 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 GJD2Q9UKL4 321 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 BLOC1S6Q9UL45 172 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 MYO6Q9UM54 1294 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 RAI2Q9Y5P3 530 aa4.22□□□□□ -1.73
MDM2-229ENST00000543046 ZNF644Q9H582 1327 aaPredicted RBP4.21□□□□□ -1.73
MDM2-229ENST00000543046 PRDM15P57071 1507 aaPredicted RBP4.21□□□□□ -1.73
MDM2-229ENST00000543046 A0A096LPK6 155 aa4.21□□□□□ -1.74
MDM2-229ENST00000543046 A0A1B0GVT2 93 aa4.21□□□□□ -1.74
MDM2-229ENST00000543046 INAFM1C9JVW0 142 aa4.21□□□□□ -1.74
MDM2-229ENST00000543046 LIN7AO14910 233 aaPredicted RBP4.21□□□□□ -1.74
MDM2-229ENST00000543046 SMAD6O43541 496 aaKnown RBP4.21□□□□□ -1.74
MDM2-229ENST00000543046 SPRY3O43610 288 aa4.21□□□□□ -1.74
MDM2-229ENST00000543046 LDB2O43679 373 aa4.21□□□□□ -1.74
MDM2-229ENST00000543046 LIASO43766 372 aa4.21□□□□□ -1.74
MDM2-229ENST00000543046 SHOX2O60902 331 aaPredicted RBP4.21□□□□□ -1.74
MDM2-229ENST00000543046 SKILP12757 684 aa4.21□□□□□ -1.74
MDM2-229ENST00000543046 HOXA11P31270 313 aaPredicted RBP4.21□□□□□ -1.74
MDM2-229ENST00000543046 PEX19P40855 299 aa4.21□□□□□ -1.74
MDM2-229ENST00000543046 GPR12P47775 334 aa4.21□□□□□ -1.74
MDM2-229ENST00000543046 CCNHP51946 323 aaPredicted RBP4.21□□□□□ -1.74
MDM2-229ENST00000543046 PMS2P54278 862 aa4.21□□□□□ -1.74
MDM2-229ENST00000543046 ARSFP54793 590 aa4.21□□□□□ -1.74
MDM2-229ENST00000543046 CCZ1BP86790 482 aa4.21□□□□□ -1.74
MDM2-229ENST00000543046 CCZ1P86791 482 aaPredicted RBP4.21□□□□□ -1.74
MDM2-229ENST00000543046 CHRNDQ07001 517 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms