RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 LIX1LQ8IVB5 337 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 ADGRF2Q8IZF7 708 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 PDCL2Q8N4E4 241 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 SLC44A3Q8N4M1 653 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 OR2C3Q8N628 320 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 SLC15A4Q8N697 577 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 ATAD1Q8NBU5 361 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 VPS37AQ8NEZ2 397 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 ENGASEQ8NFI3 743 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 OR5B17Q8NGF7 314 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 TAF4BQ92750 862 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 FGF13Q92913 245 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 MCRS1Q96EZ8 462 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 DHTKD1Q96HY7 919 aaPredicted RBP5.66□□□□□ -1.5
CPSF7-220ENST00000541963 GCNAQ96QF7 691 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 MYADMQ96S97 322 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 DCLRE1CQ96SD1 692 aaKnown RBP5.66□□□□□ -1.5
CPSF7-220ENST00000541963 PNKPQ96T60 521 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 MNTQ99583 582 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 SEPT5Q99719 369 aaPredicted RBP5.66□□□□□ -1.5
CPSF7-220ENST00000541963 SMOQ99835 787 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 CPEB1Q9BZB8 566 aaKnown RBP5.66□□□□□ -1.5
CPSF7-220ENST00000541963 TINAGL1Q9GZM7 467 aaPredicted RBP5.66□□□□□ -1.5
CPSF7-220ENST00000541963 VPS11Q9H270 941 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 DEF6Q9H4E7 631 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 ZFP14Q9HCL3 533 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 HCFC1R1Q9NWW0 138 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 EHD2Q9NZN4 543 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 WNT16Q9UBV4 365 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 SIX4Q9UIU6 781 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 CDH9Q9ULB4 789 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 DUSP12Q9UNI6 340 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 YIPF1Q9Y548 306 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 BRWD1Q9NSI6 2320 aa5.66□□□□□ -1.5
CPSF7-220ENST00000541963 BICDL2A1A5D9 508 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 PRSS29PA6NIE9 313 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 ANHXE9PGG2 379 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 F5H423 210 aaPredicted RBP5.65□□□□□ -1.5
CPSF7-220ENST00000541963 IFRD1O00458 451 aaPredicted RBP5.65□□□□□ -1.5
CPSF7-220ENST00000541963 APOL1O14791 398 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 PSMA7O14818 248 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 GPR42O15529 346 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 TACC1O75410 805 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 ECI2O75521 394 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 FGFR1OPO95684 399 aaKnown RBP5.65□□□□□ -1.5
CPSF7-220ENST00000541963 ABHD16AO95870 558 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 CSH1P0DML2 217 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 CSH2P0DML3 217 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 WARSP23381 471 aaKnown RBP5.65□□□□□ -1.5
CPSF7-220ENST00000541963 ANXA13P27216 316 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 CDC25CP30307 473 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 GTF2H1P32780 548 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 MYL6P60660 151 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 UBE2HP62256 183 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 FKBP3Q00688 224 aaKnown RBP5.65□□□□□ -1.5
CPSF7-220ENST00000541963 NHLH2Q02577 135 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 CTBP1Q13363 440 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 SOWAHAQ2M3V2 549 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 LCNL1Q6ZST4 164 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 RNF44Q7L0R7 432 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 BEND5Q7L4P6 421 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 YAF2Q8IY57 180 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 ATP11CQ8NB49 1132 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 TMIEQ8NEW7 156 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 OR10T2Q8NGX3 314 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 CXorf38Q8TB03 319 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 ITFG1Q8TB96 612 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 PSMG2Q969U7 264 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 ELSPBP1Q96BH3 223 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 IQCDQ96DY2 449 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 CEP295NLQ96MC4 621 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 KLHL32Q96NJ5 620 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 PI4K2AQ9BTU6 479 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 DPH1Q9BZG8 443 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 SLITRK6Q9H5Y7 841 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 CEP72Q9P209 647 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 UXTQ9UBK9 157 aaPredicted RBP5.65□□□□□ -1.5
CPSF7-220ENST00000541963 GTF3C4Q9UKN8 822 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 ITGB1BP2Q9UKP3 347 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 CDYLQ9Y232 598 aa5.65□□□□□ -1.5
CPSF7-220ENST00000541963 C2orf16Q68DN1 1984 aa5.65□□□□□ -1.51
CPSF7-220ENST00000541963 ATP8B3O60423 1300 aa5.65□□□□□ -1.51
CPSF7-220ENST00000541963 SCN1AP35498 2009 aa5.65□□□□□ -1.51
CPSF7-220ENST00000541963 MYO10Q9HD67 2058 aa5.65□□□□□ -1.51
CPSF7-220ENST00000541963 LRRIQ3A6PVS8 624 aaPredicted RBP5.64□□□□□ -1.51
CPSF7-220ENST00000541963 A8MXQ7 604 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 N4BP1O75113 896 aaKnown RBP5.64□□□□□ -1.51
CPSF7-220ENST00000541963 ERN1O75460 977 aaKnown RBP5.64□□□□□ -1.51
CPSF7-220ENST00000541963 RASSF9O75901 435 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 GCSHP23434 173 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 ACAT1P24752 427 aaKnown RBP5.64□□□□□ -1.51
CPSF7-220ENST00000541963 CCNE1P24864 410 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 DDX6P26196 483 aaKnown RBP eCLIP5.64□□□□□ -1.51
CPSF7-220ENST00000541963 GABRR2P28476 465 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 PIK3CAP42336 1068 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 PRCPP42785 496 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 MAGEA11P43364 429 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 CASP4P49662 377 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 CLCN5P51795 746 aa5.64□□□□□ -1.51
CPSF7-220ENST00000541963 MAPK10P53779 464 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms