RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 SCHIP1Q9P0W5 487 aaPredicted RBP10.48□□□□□ -0.73
CHFR-219ENST00000541341 HESX1Q9UBX0 185 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 MARCOQ9UEW3 520 aaPredicted RBP10.48□□□□□ -0.73
CHFR-219ENST00000541341 PCSK1NQ9UHG2 260 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 RIMS3Q9UJD0 308 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 CDH7Q9ULB5 785 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 B3GNT3Q9Y2A9 372 aa10.48□□□□□ -0.73
CHFR-219ENST00000541341 SMIM28A0A1B0GU29 152 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 CASTOR2A6NHX0 329 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 LACTBL1A8MY62 500 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 TPP1O14773 563 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 PAPSS1O43252 624 aaPredicted RBP10.47□□□□□ -0.73
CHFR-219ENST00000541341 TGM5O43548 720 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 USP1O94782 785 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 PGM3O95394 542 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 CSH1P0DML2 217 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 CSH2P0DML3 217 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 PORP16435 677 aaPredicted RBP10.47□□□□□ -0.73
CHFR-219ENST00000541341 PIK3R1P27986 724 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 RBL1P28749 1068 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 ASPAP45381 313 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 ATP4BP51164 291 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 LIMK2P53671 638 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 RHDQ02161 417 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 TUBA3CQ13748 450 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 PDE1CQ14123 709 aaPredicted RBP10.47□□□□□ -0.73
CHFR-219ENST00000541341 SEPT6Q14141 434 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 INPP5AQ14642 412 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 KCTD19Q17RG1 926 aaPredicted RBP10.47□□□□□ -0.73
CHFR-219ENST00000541341 LRRC36Q1X8D7 754 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 ZNF423Q2M1K9 1284 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 HSF5Q4G112 596 aaPredicted RBP10.47□□□□□ -0.73
CHFR-219ENST00000541341 CCDC92Q53HC0 331 aaPredicted RBP10.47□□□□□ -0.73
CHFR-219ENST00000541341 MDH1BQ5I0G3 518 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 KCNT1Q5JUK3 1230 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 CYP4A22Q5TCH4 519 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 TXNRD3NBQ6F5E7 133 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 ITPRIPL1Q6GPH6 555 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 DENND1BQ6P3S1 775 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 POTEHQ6S545 545 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 FRMD7Q6ZUT3 714 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 DENND5BQ6ZUT9 1274 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 LINC00523Q86TU6 105 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 KIAA2013Q8IYS2 634 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 SLC44A3Q8N4M1 653 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 SLC25A41Q8N5S1 370 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 PCYOX1LQ8NBM8 494 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 KBTBD7Q8WVZ9 684 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 HTR3CQ8WXA8 447 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 RXFP2Q8WXD0 754 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 ZUFSPQ96AP4 578 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 ROPN1LQ96C74 230 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 CCDC124Q96CT7 223 aaKnown RBP10.47□□□□□ -0.73
CHFR-219ENST00000541341 CERS2Q96G23 380 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 MAGED4Q96JG8 741 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 COX4I2Q96KJ9 171 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 CNBD2Q96M20 576 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 ZMAT2Q96NC0 199 aaKnown RBP10.47□□□□□ -0.73
CHFR-219ENST00000541341 CDRT15Q96T59 188 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 SORT1Q99523 831 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 RBBP8Q99708 897 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 OLFM1Q99784 485 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 RPP25Q9BUL9 199 aaKnown RBP10.47□□□□□ -0.73
CHFR-219ENST00000541341 C1orf50Q9BV19 199 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 SLC2A11Q9BYW1 496 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 ANKRD60Q9BZ19 345 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 FOXQ1Q9C009 403 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 TBC1D17Q9HA65 648 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 WDR41Q9HAD4 459 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 NMRAL1Q9HBL8 299 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 WDR6Q9NNW5 1121 aaKnown RBP10.47□□□□□ -0.73
CHFR-219ENST00000541341 TRHDEQ9UKU6 1024 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 CEPT1Q9Y6K0 416 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 CACNA1IQ9P0X4 2223 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 CACNA1HO95180 2353 aa10.47□□□□□ -0.73
CHFR-219ENST00000541341 RALGAPA1Q6GYQ0 2036 aa10.46□□□□□ -0.73
CHFR-219ENST00000541341 HEATR9A2RTY3 570 aa10.46□□□□□ -0.73
CHFR-219ENST00000541341 TYW5A2RUC4 315 aaKnown RBP10.46□□□□□ -0.73
CHFR-219ENST00000541341 TRIM64CA6NLI5 447 aa10.46□□□□□ -0.73
CHFR-219ENST00000541341 CXorf49A8MYA2 514 aaPredicted RBP10.46□□□□□ -0.73
CHFR-219ENST00000541341 H3BNH8 94 aa10.46□□□□□ -0.73
CHFR-219ENST00000541341 M0QYV0 167 aa10.46□□□□□ -0.73
CHFR-219ENST00000541341 ZNF195O14628 629 aa10.46□□□□□ -0.73
CHFR-219ENST00000541341 XPOTO43592 962 aaKnown RBP10.46□□□□□ -0.73
CHFR-219ENST00000541341 SNAP91O60641 907 aa10.46□□□□□ -0.73
CHFR-219ENST00000541341 CILPO75339 1184 aa10.46□□□□□ -0.73
CHFR-219ENST00000541341 TCF4P15884 667 aa10.46□□□□□ -0.73
CHFR-219ENST00000541341 IL10P22301 178 aa10.46□□□□□ -0.73
CHFR-219ENST00000541341 LRPAP1P30533 357 aa10.46□□□□□ -0.73
CHFR-219ENST00000541341 GPD2P43304 727 aa10.46□□□□□ -0.73
CHFR-219ENST00000541341 ID4P47928 161 aa10.46□□□□□ -0.73
CHFR-219ENST00000541341 NUBP1P53384 320 aa10.46□□□□□ -0.73
CHFR-219ENST00000541341 RPL10AP62906 217 aaKnown RBP10.46□□□□□ -0.73
CHFR-219ENST00000541341 PHEXP78562 749 aa10.46□□□□□ -0.73
CHFR-219ENST00000541341 RBP5P82980 135 aa10.46□□□□□ -0.73
CHFR-219ENST00000541341 MPP1Q00013 466 aa10.46□□□□□ -0.73
CHFR-219ENST00000541341 TFAMQ00059 246 aaKnown RBP10.46□□□□□ -0.73
CHFR-219ENST00000541341 SLC6A3Q01959 620 aa10.46□□□□□ -0.73
CHFR-219ENST00000541341 DSC1Q08554 894 aa10.46□□□□□ -0.73
CHFR-219ENST00000541341 INCA1Q0VD86 236 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms