RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 KLHDC8BQ8IXV7 354 aa16.82■□□□□ 0.28
UBC-208ENST00000540700 OR2I1PQ8NGU4 316 aa16.82■□□□□ 0.28
UBC-208ENST00000540700 TUBGCP5Q96RT8 1024 aa16.82■□□□□ 0.28
UBC-208ENST00000540700 TRIB3Q96RU7 358 aa16.82■□□□□ 0.28
UBC-208ENST00000540700 TDRD1Q9BXT4 1180 aaKnown RBP16.82■□□□□ 0.28
UBC-208ENST00000540700 NEUROG2Q9H2A3 272 aa16.82■□□□□ 0.28
UBC-208ENST00000540700 FBXL12Q9NXK8 326 aa16.82■□□□□ 0.28
UBC-208ENST00000540700 RNF14Q9UBS8 474 aa16.82■□□□□ 0.28
UBC-208ENST00000540700 RSPH14Q9UHP6 348 aa16.82■□□□□ 0.28
UBC-208ENST00000540700 TRHDEQ9UKU6 1024 aa16.82■□□□□ 0.28
UBC-208ENST00000540700 CYP8B1Q9UNU6 501 aa16.82■□□□□ 0.28
UBC-208ENST00000540700 FARP1Q9Y4F1 1045 aaPredicted RBP16.82■□□□□ 0.28
UBC-208ENST00000540700 HELZ2Q9BYK8 2649 aaKnown RBP16.81■□□□□ 0.28
UBC-208ENST00000540700 IGHV1OR15-9A0A0B4J2B8 117 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 C16orf96A6NNT2 1141 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 OPHN1O60890 802 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 NEBLO76041 1014 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 TRIM16O95361 564 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 IGLV3-19P01714 112 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 DNTTP04053 509 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 STIP1P31948 543 aaKnown RBP16.81■□□□□ 0.28
UBC-208ENST00000540700 FNTAP49354 379 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 MRPS25P82663 173 aaKnown RBP16.81■□□□□ 0.28
UBC-208ENST00000540700 SEMG2Q02383 582 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 BCL2L1Q07817 233 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 TRIP13Q15645 432 aaPredicted RBP16.81■□□□□ 0.28
UBC-208ENST00000540700 P3H1Q32P28 736 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 SOWAHCQ53LP3 525 aaPredicted RBP16.81■□□□□ 0.28
UBC-208ENST00000540700 RALGPS1Q5JS13 557 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 SLC23A3Q6PIS1 610 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 FAM124AQ86V42 546 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 KLHL7Q8IXQ5 586 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 SPATA4Q8NEY3 305 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 ATL2Q8NHH9 583 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 LRIG1Q96JA1 1093 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 MRGPRX2Q96LB1 330 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 OSBPL1AQ9BXW6 950 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 ATP13A3Q9H7F0 1226 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 HOMER3Q9NSC5 361 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 GGT7Q9UJ14 662 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 PILRBQ9UKJ0 227 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 CHKBQ9Y259 395 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 ITM2BQ9Y287 266 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 GPSM3Q9Y4H4 160 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 CELSR3Q9NYQ7 3312 aa16.81■□□□□ 0.28
UBC-208ENST00000540700 APC2O95996 2303 aa16.8■□□□□ 0.28
UBC-208ENST00000540700 C10orf142B7Z368 130 aa16.8■□□□□ 0.28
UBC-208ENST00000540700 RNASEH2AO75792 299 aaKnown RBP16.8■□□□□ 0.28
UBC-208ENST00000540700 PGLSO95336 258 aa16.8■□□□□ 0.28
UBC-208ENST00000540700 SERPINA4P29622 427 aa16.8■□□□□ 0.28
UBC-208ENST00000540700 ACSL1P33121 698 aa16.8■□□□□ 0.28
UBC-208ENST00000540700 PAFAH1B1P43034 410 aa16.8■□□□□ 0.28
UBC-208ENST00000540700 ZBTB16Q05516 673 aa16.8■□□□□ 0.28
UBC-208ENST00000540700 RAD51Q06609 339 aa16.8■□□□□ 0.28
UBC-208ENST00000540700 COL28A1Q2UY09 1125 aa16.8■□□□□ 0.28
UBC-208ENST00000540700 FAM46CQ5VWP2 391 aa16.8■□□□□ 0.28
UBC-208ENST00000540700 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.8■□□□□ 0.28
UBC-208ENST00000540700 ERN2Q76MJ5 926 aaKnown RBP16.8■□□□□ 0.28
UBC-208ENST00000540700 PDZD3Q86UT5 571 aa16.8■□□□□ 0.28
UBC-208ENST00000540700 KIF18AQ8NI77 898 aa16.8■□□□□ 0.28
UBC-208ENST00000540700 PIH1D2Q8WWB5 315 aa16.8■□□□□ 0.28
UBC-208ENST00000540700 ZNF641Q96N77 438 aaPredicted RBP16.8■□□□□ 0.28
UBC-208ENST00000540700 HDAC8Q9BY41 377 aa16.8■□□□□ 0.28
UBC-208ENST00000540700 DKK3Q9UBP4 350 aa16.8■□□□□ 0.28
UBC-208ENST00000540700 SLC6A14Q9UN76 642 aa16.8■□□□□ 0.28
UBC-208ENST00000540700 ACACAQ13085 2346 aa16.8■□□□□ 0.28
UBC-208ENST00000540700 GOLGA6L10A0A0M3HER8 536 aa16.79■□□□□ 0.28
UBC-208ENST00000540700 A0A0U1RQS6 177 aa16.79■□□□□ 0.28
UBC-208ENST00000540700 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.79■□□□□ 0.28
UBC-208ENST00000540700 UPK3BL1B0FP48 263 aa16.79■□□□□ 0.28
UBC-208ENST00000540700 UPK3BL2E5RIL1 263 aa16.79■□□□□ 0.28
UBC-208ENST00000540700 SOCS5O75159 536 aa16.79■□□□□ 0.28
UBC-208ENST00000540700 PMPCBO75439 489 aa16.79■□□□□ 0.28
UBC-208ENST00000540700 ZIC2O95409 532 aaPredicted RBP16.79■□□□□ 0.28
UBC-208ENST00000540700 SERPINF2P08697 491 aa16.79■□□□□ 0.28
UBC-208ENST00000540700 ATXN1LP0C7T5 689 aaKnown RBP16.79■□□□□ 0.28
UBC-208ENST00000540700 ACADMP11310 421 aa16.79■□□□□ 0.28
UBC-208ENST00000540700 ADRB3P13945 408 aa16.79■□□□□ 0.28
UBC-208ENST00000540700 ADPRHP54922 357 aa16.79■□□□□ 0.28
UBC-208ENST00000540700 WNT3AP56704 352 aa16.79■□□□□ 0.28
UBC-208ENST00000540700 RPL6Q02878 288 aaKnown RBP16.79■□□□□ 0.28
UBC-208ENST00000540700 PCSK7Q16549 785 aa16.79■□□□□ 0.28
UBC-208ENST00000540700 DUOXA1Q1HG43 343 aa16.79■□□□□ 0.28
UBC-208ENST00000540700 ZNF423Q2M1K9 1284 aa16.79■□□□□ 0.28
UBC-208ENST00000540700 SYCP2LQ5T4T6 812 aa16.79■□□□□ 0.28
UBC-208ENST00000540700 KCTD11Q693B1 232 aa16.79■□□□□ 0.28
UBC-208ENST00000540700 ARHGEF18Q6ZSZ5 1173 aa16.79■□□□□ 0.28
UBC-208ENST00000540700 USP30Q70CQ3 517 aa16.79■□□□□ 0.28
UBC-208ENST00000540700 KDELC2Q7Z4H8 507 aa16.79■□□□□ 0.28
UBC-208ENST00000540700 MINDY1Q8N5J2 469 aa16.79■□□□□ 0.28
UBC-208ENST00000540700 PDCD6IPQ8WUM4 868 aaKnown RBP16.79■□□□□ 0.28
UBC-208ENST00000540700 TOE1Q96GM8 510 aaKnown RBP16.79■□□□□ 0.28
UBC-208ENST00000540700 CAMK1GQ96NX5 476 aa16.79■□□□□ 0.28
UBC-208ENST00000540700 KRT12Q99456 494 aa16.79■□□□□ 0.28
UBC-208ENST00000540700 ETNK1Q9HBU6 452 aa16.79■□□□□ 0.28
UBC-208ENST00000540700 WSB2Q9NYS7 404 aaPredicted RBP16.79■□□□□ 0.28
UBC-208ENST00000540700 PCYOX1Q9UHG3 505 aa16.79■□□□□ 0.28
UBC-208ENST00000540700 FAM153AQ9UHL3 310 aa16.79■□□□□ 0.28
UBC-208ENST00000540700 SCML1Q9UN30 329 aa16.79■□□□□ 0.28
UBC-208ENST00000540700 PCDHB9Q9Y5E1 797 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms