RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 NT5DC3Q86UY8 548 aa11.51□□□□□ -0.57
TMEM258-205ENST00000540434 GATAD2AQ86YP4 633 aa11.51□□□□□ -0.57
TMEM258-205ENST00000540434 TEX26Q8N6G2 289 aa11.51□□□□□ -0.57
TMEM258-205ENST00000540434 CASKIN2Q8WXE0 1202 aa11.51□□□□□ -0.57
TMEM258-205ENST00000540434 MAML1Q92585 1016 aa11.51□□□□□ -0.57
TMEM258-205ENST00000540434 FUBP1Q96AE4 644 aaKnown RBP11.51□□□□□ -0.57
TMEM258-205ENST00000540434 GDAP1L1Q96MZ0 367 aa11.51□□□□□ -0.57
TMEM258-205ENST00000540434 SLC6A18Q96N87 628 aa11.51□□□□□ -0.57
TMEM258-205ENST00000540434 ZNF830Q96NB3 372 aaPredicted RBP11.51□□□□□ -0.57
TMEM258-205ENST00000540434 PSKH2Q96QS6 385 aa11.51□□□□□ -0.57
TMEM258-205ENST00000540434 HEMGNQ9BXL5 484 aa11.51□□□□□ -0.57
TMEM258-205ENST00000540434 CEP41Q9BYV8 373 aa11.51□□□□□ -0.57
TMEM258-205ENST00000540434 PCED1AQ9H1Q7 454 aa11.51□□□□□ -0.57
TMEM258-205ENST00000540434 C10orf88Q9H8K7 445 aa11.51□□□□□ -0.57
TMEM258-205ENST00000540434 NOD2Q9HC29 1040 aa11.51□□□□□ -0.57
TMEM258-205ENST00000540434 TM9SF3Q9HD45 589 aa11.51□□□□□ -0.57
TMEM258-205ENST00000540434 FZD3Q9NPG1 666 aa11.51□□□□□ -0.57
TMEM258-205ENST00000540434 LCMT1Q9UIC8 334 aa11.51□□□□□ -0.57
TMEM258-205ENST00000540434 HEY1Q9Y5J3 304 aa11.51□□□□□ -0.57
TMEM258-205ENST00000540434 FADS3Q9Y5Q0 445 aa11.51□□□□□ -0.57
TMEM258-205ENST00000540434 SPTAN1Q13813 2472 aaKnown RBP11.51□□□□□ -0.57
TMEM258-205ENST00000540434 TRPM6Q9BX84 2022 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 hCG_1818297A0A087WSY0 165 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 A0A0U1RQS6 177 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 A0A1W2PPC4 97 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 A0A1W2PQU0 124 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 A0A1W2PR77 199 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 TRAFD1O14545 582 aaPredicted RBP11.5□□□□□ -0.57
TMEM258-205ENST00000540434 ENC1O14682 589 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 AREL1O15033 823 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 RAD51BO15315 384 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 DDX3YO15523 660 aaKnown RBP11.5□□□□□ -0.57
TMEM258-205ENST00000540434 PSTPIP1O43586 416 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 FTCDO95954 541 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 IGSF6O95976 241 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 CD27P26842 260 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 CTSKP43235 329 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 GRIA4P48058 902 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 CSNK1DP48730 415 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 CCT8P50990 548 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 SCNN1BP51168 640 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 CCR5P51681 352 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 TMPRSS3P57727 454 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 GSDMDP57764 484 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 NIPAL4Q0D2K0 466 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 ZNF284Q2VY69 593 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 C6orf132Q5T0Z8 1188 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 TMCO4Q5TGY1 634 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 KAZNQ674X7 775 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 HIST2H2BCQ6DN03 193 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 RFX6Q8HWS3 928 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 MAP7D3Q8IWC1 876 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 KATNAL2Q8IYT4 538 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 ATPAF2Q8N5M1 289 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.5□□□□□ -0.57
TMEM258-205ENST00000540434 CNTD1Q8N815 330 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 CCDC114Q96M63 670 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 OLFM3Q96PB7 478 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 TSGA13Q96PP4 275 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 MYOCQ99972 504 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 CPEB1Q9BZB8 566 aaKnown RBP11.5□□□□□ -0.57
TMEM258-205ENST00000540434 KCNF1Q9H3M0 494 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 SUV39H2Q9H5I1 410 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 SRPK3Q9UPE1 567 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 FARP1Q9Y4F1 1045 aaPredicted RBP11.5□□□□□ -0.57
TMEM258-205ENST00000540434 PCDHGC4Q9Y5F7 938 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 PCDHA3Q9Y5H8 950 aa11.5□□□□□ -0.57
TMEM258-205ENST00000540434 UTP20O75691 2785 aaKnown RBP11.5□□□□□ -0.57
TMEM258-205ENST00000540434 NOTCH2Q04721 2471 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 LRRC72A6NJI9 287 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 ZNF487B1APH4 448 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 KCNK1O00180 336 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 TERTO14746 1132 aaKnown RBP11.49□□□□□ -0.57
TMEM258-205ENST00000540434 MATN3O15232 486 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 SLC31A1O15431 190 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 SLC7A4O43246 635 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 CST8O60676 142 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 RFPL3O75679 317 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 HLA-DQB2P05538 268 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 C1SP09871 688 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 PYGMP11217 842 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 GP1BBP13224 206 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 CCNCP24863 283 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 CTNNA2P26232 953 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 CTNNA1P35221 906 aaKnown RBP11.49□□□□□ -0.57
TMEM258-205ENST00000540434 ACTN2P35609 894 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 NEK3P51956 506 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 NAP1L1P55209 391 aaKnown RBP11.49□□□□□ -0.57
TMEM258-205ENST00000540434 NSUN2Q08J23 767 aaKnown RBP eCLIP11.49□□□□□ -0.57
TMEM258-205ENST00000540434 TRAF2Q12933 501 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 ZBTB17Q13105 803 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 ZNF211Q13398 564 aaPredicted RBP11.49□□□□□ -0.57
TMEM258-205ENST00000540434 TMEM259Q4ZIN3 620 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 NYAP1Q6ZVC0 841 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 ARRDC2Q8TBH0 407 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 KIAA1524Q8TCG1 905 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 HAUS1Q96CS2 278 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 ZNF599Q96NL3 588 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 FAM118BQ9BPY3 351 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 MGME1Q9BQP7 344 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms