RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 IGKV6D-21A0A0A0MT36 114 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 TCRBV3S1A0A5B6 114 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 HMX2A2RU54 273 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 OR5K3A6NET4 321 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 CENPXA8MT69 81 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 NRP1O14786 923 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 EIF3DO15371 548 aaKnown RBP eCLIP9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 SH3BP5O60239 455 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 STBD1O95210 358 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 KRT1P04264 644 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 HTR2BP41595 481 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 MLLT3P42568 568 aaPredicted RBP9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 ALDH7A1P49419 539 aaKnown RBP9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 RARRES1P49788 294 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 MAP3K7CLP57077 242 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 ABCE1P61221 599 aaKnown RBP9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 GBE1Q04446 702 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 NAB1Q13506 487 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 IRF5Q13568 498 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 SLC12A1Q13621 1099 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 LAMC2Q13753 1193 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 PCLAFQ15004 111 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 ZFP69Q49AA0 526 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 DUSP28Q4G0W2 176 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 NDUFAF5Q5TEU4 345 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 CYP2R1Q6VVX0 501 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 C10orf107Q8IVU9 208 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 CCDC103Q8IW40 242 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 OR6Q1Q8NGQ2 317 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 ADAM32Q8TC27 787 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 FAM110BQ8TC76 370 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 SHC3Q92529 594 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 PIK3R3Q92569 461 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 LPGAT1Q92604 370 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 CNDP1Q96KN2 507 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 ACAT2Q9BWD1 397 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 YTHDF1Q9BYJ9 559 aaKnown RBP9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 PNPLA8Q9NP80 782 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 CD320Q9NPF0 282 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 C8orf4Q9NR00 106 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 AP4E1Q9UPM8 1137 aa9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 MAFBQ9Y5Q3 323 aaPredicted RBP9.52□□□□□ -0.88
CTNNA1-243ENST00000540387 ISPDA4D126 451 aa9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 GOLGA8JA6NMD2 632 aa9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 ATP6V1G2-DDX39BF2Z307 99 aa9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 PAPSS1O43252 624 aaPredicted RBP9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 PRLP01236 227 aa9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 TCF4P15884 667 aa9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 TBXAS1P24557 533 aaPredicted RBP9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 GRIK1P39086 918 aa9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 HARS2P49590 506 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 ACOT2P49753 483 aa9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 STAT5BP51692 787 aa9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 HK2P52789 917 aa9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 SNTA1Q13424 505 aa9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 DSC3Q14574 896 aa9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 RFTN1Q14699 578 aaPredicted RBP9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 ANO4Q32M45 955 aa9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 CATSPEREQ5SY80 951 aa9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 CCNYL2Q5T2Q4 361 aa9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 INTS11Q5TA45 600 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 N4BP2L1Q5TBK1 243 aaPredicted RBP9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 AGAP6Q5VW22 663 aa9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 C1orf186Q6ZWK4 172 aa9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 LURAP1LQ8IV03 231 aa9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 SLC35B2Q8TB61 432 aa9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 AFG1LQ8WV93 481 aa9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 CPA5Q8WXQ8 436 aa9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 DUS3LQ96G46 650 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 BTN2A3PQ96KV6 586 aa9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 AGAP4Q96P64 663 aa9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 EFCAB1Q9HAE3 211 aa9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 TCF7L2Q9NQB0 619 aa9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 RPRD1BQ9NQG5 326 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 SMYD2Q9NRG4 433 aa9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 PAQR5Q9NXK6 330 aaPredicted RBP9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 PCDHB4Q9Y5E5 795 aa9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 PLXNA1Q9UIW2 1896 aa9.52□□□□□ -0.89
CTNNA1-243ENST00000540387 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.51□□□□□ -0.89
CTNNA1-243ENST00000540387 TK2O00142 265 aa9.51□□□□□ -0.89
CTNNA1-243ENST00000540387 UPK1BO75841 260 aa9.51□□□□□ -0.89
CTNNA1-243ENST00000540387 NDST3O95803 873 aa9.51□□□□□ -0.89
CTNNA1-243ENST00000540387 ELNP15502 786 aa9.51□□□□□ -0.89
CTNNA1-243ENST00000540387 HTR1BP28222 390 aa9.51□□□□□ -0.89
CTNNA1-243ENST00000540387 CYP2C18P33260 490 aa9.51□□□□□ -0.89
CTNNA1-243ENST00000540387 EIF2DP41214 584 aaKnown RBP9.51□□□□□ -0.89
CTNNA1-243ENST00000540387 POLD2P49005 469 aa9.51□□□□□ -0.89
CTNNA1-243ENST00000540387 SEPHS1P49903 392 aa9.51□□□□□ -0.89
CTNNA1-243ENST00000540387 PPP5CP53041 499 aa9.51□□□□□ -0.89
CTNNA1-243ENST00000540387 BNIP2Q12982 314 aa9.51□□□□□ -0.89
CTNNA1-243ENST00000540387 POLD3Q15054 466 aaPredicted RBP9.51□□□□□ -0.89
CTNNA1-243ENST00000540387 PLCL1Q15111 1095 aa9.51□□□□□ -0.89
CTNNA1-243ENST00000540387 HIST2H2ACQ16777 129 aaPredicted RBP9.51□□□□□ -0.89
CTNNA1-243ENST00000540387 XKR9Q5GH70 373 aa9.51□□□□□ -0.89
CTNNA1-243ENST00000540387 BRMS1LQ5PSV4 323 aa9.51□□□□□ -0.89
CTNNA1-243ENST00000540387 FAXCQ5TGI0 409 aa9.51□□□□□ -0.89
CTNNA1-243ENST00000540387 BROXQ5VW32 411 aa9.51□□□□□ -0.89
CTNNA1-243ENST00000540387 SDE2Q6IQ49 451 aa9.51□□□□□ -0.89
CTNNA1-243ENST00000540387 PADI6Q6TGC4 694 aa9.51□□□□□ -0.89
CTNNA1-243ENST00000540387 SPOCD1Q6ZMY3 1216 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms