RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 ITIH2P19823 946 aa13.46□□□□□ -0.25
CCDC130-202ENST00000540216 KCNA4P22459 653 aa13.46□□□□□ -0.25
CCDC130-202ENST00000540216 EPHA8P29322 1005 aaPredicted RBP13.46□□□□□ -0.25
CCDC130-202ENST00000540216 VIPR1P32241 457 aa13.46□□□□□ -0.25
CCDC130-202ENST00000540216 GRK6P43250 576 aa13.46□□□□□ -0.25
CCDC130-202ENST00000540216 PFN3P60673 137 aa13.46□□□□□ -0.25
CCDC130-202ENST00000540216 YPEL5P62699 121 aa13.46□□□□□ -0.25
CCDC130-202ENST00000540216 DSC2Q02487 901 aa13.46□□□□□ -0.25
CCDC130-202ENST00000540216 LRRC14Q15048 493 aa13.46□□□□□ -0.25
CCDC130-202ENST00000540216 PRKD1Q15139 912 aaPredicted RBP13.46□□□□□ -0.25
CCDC130-202ENST00000540216 SLC14A2Q15849 920 aa13.46□□□□□ -0.25
CCDC130-202ENST00000540216 NPNTQ6UXI9 565 aa13.46□□□□□ -0.25
CCDC130-202ENST00000540216 LIPIQ6XZB0 460 aa13.46□□□□□ -0.25
CCDC130-202ENST00000540216 USP45Q70EL2 814 aa13.46□□□□□ -0.25
CCDC130-202ENST00000540216 PEX26Q7Z412 305 aa13.46□□□□□ -0.25
CCDC130-202ENST00000540216 UBL4BQ8N7F7 174 aa13.46□□□□□ -0.25
CCDC130-202ENST00000540216 TP53I13Q8NBR0 393 aaPredicted RBP13.46□□□□□ -0.25
CCDC130-202ENST00000540216 ARRDC2Q8TBH0 407 aa13.46□□□□□ -0.25
CCDC130-202ENST00000540216 TFB1MQ8WVM0 346 aaKnown RBP13.46□□□□□ -0.25
CCDC130-202ENST00000540216 MCCC1Q96RQ3 725 aaPredicted RBP13.46□□□□□ -0.25
CCDC130-202ENST00000540216 CDC6Q99741 560 aa13.46□□□□□ -0.25
CCDC130-202ENST00000540216 GRPEL1Q9HAV7 217 aa13.46□□□□□ -0.25
CCDC130-202ENST00000540216 TRIM10Q9UDY6 481 aa13.46□□□□□ -0.25
CCDC130-202ENST00000540216 PCOLCE2Q9UKZ9 415 aa13.46□□□□□ -0.25
CCDC130-202ENST00000540216 DNPEPQ9ULA0 475 aa13.46□□□□□ -0.25
CCDC130-202ENST00000540216 RAI2Q9Y5P3 530 aa13.46□□□□□ -0.25
CCDC130-202ENST00000540216 PCNX2A6NKB5 2137 aa13.46□□□□□ -0.26
CCDC130-202ENST00000540216 NCOR2Q9Y618 2525 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 SPTY2D1-AS1A0A0U1RR47 76 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 MED19A0JLT2 244 aaPredicted RBP13.45□□□□□ -0.26
CCDC130-202ENST00000540216 GOLGA6L3A6NEY3 463 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 HACD1B0YJ81 288 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 APOC4-APOC2K7ER74 178 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 FZD6O60353 706 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 CBFA2T3O75081 653 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 APOC2P02655 101 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 PRKCGP05129 697 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 ADRB1P08588 477 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 PECAM1P16284 738 aaPredicted RBP13.45□□□□□ -0.26
CCDC130-202ENST00000540216 IGFALSP35858 605 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 PEX5P50542 639 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 THOP1P52888 689 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 ZBTB17Q13105 803 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 XRCC4Q13426 336 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 PTK2BQ14289 1009 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 SHBQ15464 509 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 CCDC181Q5TID7 509 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 GLRX5Q86SX6 157 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 PARGQ86W56 976 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 LRRC8AQ8IWT6 810 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 SLC22A18ASQ8N1D0 253 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 CNTD1Q8N815 330 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 BAHD1Q8TBE0 780 aaPredicted RBP13.45□□□□□ -0.26
CCDC130-202ENST00000540216 SAP25Q8TEE9 199 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 SETD7Q8WTS6 366 aaKnown RBP13.45□□□□□ -0.26
CCDC130-202ENST00000540216 LRRN4Q8WUT4 740 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 PIH1D2Q8WWB5 315 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 SCRN2Q96FV2 425 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 VAT1Q99536 393 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 TDRD1Q9BXT4 1180 aaKnown RBP13.45□□□□□ -0.26
CCDC130-202ENST00000540216 OSBPL8Q9BZF1 889 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 B4GALT6Q9UBX8 382 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 PPIL1Q9Y3C6 166 aa13.45□□□□□ -0.26
CCDC130-202ENST00000540216 PSMD11O00231 422 aa13.44□□□□□ -0.26
CCDC130-202ENST00000540216 GIPC1O14908 333 aa13.44□□□□□ -0.26
CCDC130-202ENST00000540216 ZNF189O75820 626 aaPredicted RBP13.44□□□□□ -0.26
CCDC130-202ENST00000540216 HEXIM1O94992 359 aaKnown RBP13.44□□□□□ -0.26
CCDC130-202ENST00000540216 ITGAVP06756 1048 aa13.44□□□□□ -0.26
CCDC130-202ENST00000540216 CCDC175P0C221 793 aa13.44□□□□□ -0.26
CCDC130-202ENST00000540216 EPHB1P54762 984 aa13.44□□□□□ -0.26
CCDC130-202ENST00000540216 IL9RQ01113 521 aa13.44□□□□□ -0.26
CCDC130-202ENST00000540216 ADCY2Q08462 1091 aa13.44□□□□□ -0.26
CCDC130-202ENST00000540216 NIPAL4Q0D2K0 466 aa13.44□□□□□ -0.26
CCDC130-202ENST00000540216 MTM1Q13496 603 aa13.44□□□□□ -0.26
CCDC130-202ENST00000540216 PDE1CQ14123 709 aaPredicted RBP13.44□□□□□ -0.26
CCDC130-202ENST00000540216 FZD2Q14332 565 aa13.44□□□□□ -0.26
CCDC130-202ENST00000540216 IRF4Q15306 451 aa13.44□□□□□ -0.26
CCDC130-202ENST00000540216 TRIP6Q15654 476 aaKnown RBP13.44□□□□□ -0.26
CCDC130-202ENST00000540216 WSCD2Q2TBF2 565 aa13.44□□□□□ -0.26
CCDC130-202ENST00000540216 TEX44Q53QW1 395 aa13.44□□□□□ -0.26
CCDC130-202ENST00000540216 PRAMEF14Q5SWL7 426 aa13.44□□□□□ -0.26
CCDC130-202ENST00000540216 N4BP2L1Q5TBK1 243 aaPredicted RBP13.44□□□□□ -0.26
CCDC130-202ENST00000540216 ZNF662Q6ZS27 426 aa13.44□□□□□ -0.26
CCDC130-202ENST00000540216 RHBDD1Q8TEB9 315 aa13.44□□□□□ -0.26
CCDC130-202ENST00000540216 ALG3Q92685 438 aa13.44□□□□□ -0.26
CCDC130-202ENST00000540216 QKIQ96PU8 341 aaKnown RBP eCLIP13.44□□□□□ -0.26
CCDC130-202ENST00000540216 FERMT1Q9BQL6 677 aa13.44□□□□□ -0.26
CCDC130-202ENST00000540216 SEPT10Q9P0V9 454 aa13.44□□□□□ -0.26
CCDC130-202ENST00000540216 SAE1Q9UBE0 346 aaPredicted RBP13.44□□□□□ -0.26
CCDC130-202ENST00000540216 COQ6Q9Y2Z9 468 aa13.44□□□□□ -0.26
CCDC130-202ENST00000540216 CAPN6Q9Y6Q1 641 aa13.44□□□□□ -0.26
CCDC130-202ENST00000540216 LRRK1Q38SD2 2015 aa13.44□□□□□ -0.26
CCDC130-202ENST00000540216 COL5A1P20908 1838 aaPredicted RBP13.43□□□□□ -0.26
CCDC130-202ENST00000540216 A0A0J9YYE9 177 aa13.43□□□□□ -0.26
CCDC130-202ENST00000540216 A0A0U1RQJ8 604 aa13.43□□□□□ -0.26
CCDC130-202ENST00000540216 NPIPB15A6NHN6 443 aaPredicted RBP13.43□□□□□ -0.26
CCDC130-202ENST00000540216 H3BM21 787 aa13.43□□□□□ -0.26
CCDC130-202ENST00000540216 RECQL5O94762 991 aaPredicted RBP13.43□□□□□ -0.26
CCDC130-202ENST00000540216 TJP3O95049 919 aa13.43□□□□□ -0.26
CCDC130-202ENST00000540216 TRBC1P01850 177 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms