RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 M0QZQ0 153 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 UBXN8O00124 270 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 GPR182O15218 404 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 ALDOCP09972 364 aaKnown RBP14.12□□□□□ -0.15
UBE3B-210ENST00000539599 CES1P23141 567 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 CHN2P52757 468 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 PFKPQ01813 784 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 MARC1Q5VT66 337 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 FBXL22Q6P050 247 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 ZNF549Q6P9A3 640 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 KLHDC8BQ8IXV7 354 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 GALNT15Q8N3T1 639 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 METTL25Q8N6Q8 603 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 CEP70Q8NHQ1 597 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 PDCD6IPQ8WUM4 868 aaKnown RBP14.12□□□□□ -0.15
UBE3B-210ENST00000539599 MAELQ96JY0 434 aaKnown RBP14.12□□□□□ -0.15
UBE3B-210ENST00000539599 TSPAN18Q96SJ8 248 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 SERPINI1Q99574 410 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 GRIP2Q9C0E4 1043 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 CRISPLD1Q9H336 500 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 CACNA2D2Q9NY47 1150 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 IKZF3Q9UKT9 509 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 PRPF19Q9UMS4 504 aaKnown RBP14.12□□□□□ -0.15
UBE3B-210ENST00000539599 CDH23Q9H251 3354 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 SCN10AQ9Y5Y9 1956 aa14.12□□□□□ -0.15
UBE3B-210ENST00000539599 A0A0U1RQF3 1178 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 NCF1BA6NI72 391 aaPredicted RBP14.11□□□□□ -0.15
UBE3B-210ENST00000539599 NCF1CA8MVU1 366 aaPredicted RBP14.11□□□□□ -0.15
UBE3B-210ENST00000539599 UBDO15205 165 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 FGF10O15520 208 aaPredicted RBP14.11□□□□□ -0.15
UBE3B-210ENST00000539599 LTA4HP09960 611 aaKnown RBP14.11□□□□□ -0.15
UBE3B-210ENST00000539599 BMP1P13497 986 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 NCF1P14598 390 aaPredicted RBP14.11□□□□□ -0.15
UBE3B-210ENST00000539599 GATMP50440 423 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 PRKAA2P54646 552 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 TBX4P57082 545 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 PRAMEP78395 509 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 MYBPC1Q00872 1141 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 BRMS1LQ5PSV4 323 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 SCIMPQ6UWF3 145 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 PIWIL4Q7Z3Z4 852 aaKnown RBP14.11□□□□□ -0.15
UBE3B-210ENST00000539599 RTN4RL1Q86UN2 441 aaPredicted RBP14.11□□□□□ -0.15
UBE3B-210ENST00000539599 THEM5Q8N1Q8 247 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 IMP4Q96G21 291 aaKnown RBP14.11□□□□□ -0.15
UBE3B-210ENST00000539599 TRAPPC9Q96Q05 1148 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 OCEL1Q9H607 264 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 VTI1BQ9UEU0 232 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 VWA7Q9Y334 891 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 A0A0D9SEW6 157 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 PSMD12O00232 456 aaPredicted RBP14.11□□□□□ -0.15
UBE3B-210ENST00000539599 GPR39O43194 453 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 S1PR4O95977 384 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 CYP11A1P05108 521 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 PAMP19021 973 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 HADHAP40939 763 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 APLP1P51693 650 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 TIAL1Q01085 375 aaKnown RBP eCLIP14.11□□□□□ -0.15
UBE3B-210ENST00000539599 POU4F1Q01851 419 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 CAPRIN1Q14444 709 aaKnown RBP14.11□□□□□ -0.15
UBE3B-210ENST00000539599 GEN1Q17RS7 908 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 AFMIDQ63HM1 303 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 MRPL10Q7Z7H8 261 aaKnown RBP14.11□□□□□ -0.15
UBE3B-210ENST00000539599 ISCA2Q86U28 154 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 LPGAT1Q92604 370 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 UPF1Q92900 1129 aaKnown RBP eCLIP14.11□□□□□ -0.15
UBE3B-210ENST00000539599 PRPF18Q99633 342 aaKnown RBP14.11□□□□□ -0.15
UBE3B-210ENST00000539599 SEMA3CQ99985 751 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 SLC25A51Q9H1U9 297 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 C7orf72A4D263 438 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 DUSP11O75319 330 aaKnown RBP14.11□□□□□ -0.15
UBE3B-210ENST00000539599 CDKN1CP49918 316 aaPredicted RBP14.11□□□□□ -0.15
UBE3B-210ENST00000539599 INHBEP58166 350 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 SH3BP2P78314 561 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 CRHR2Q13324 411 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 GRB7Q14451 532 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 OR4D1Q15615 310 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 KCNA10Q16322 511 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 MTX3Q5HYI7 312 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 C17orf99Q6UX52 265 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 RETREG3Q86VR2 466 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 DIS3LQ8TF46 1054 aaKnown RBP14.11□□□□□ -0.15
UBE3B-210ENST00000539599 NUDT8Q8WV74 236 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 ZNF512Q96ME7 567 aaPredicted RBP14.11□□□□□ -0.15
UBE3B-210ENST00000539599 CCDC28BQ9BUN5 200 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 MRPL1Q9BYD6 325 aaKnown RBP14.11□□□□□ -0.15
UBE3B-210ENST00000539599 RGS18Q9NS28 235 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 FAM50BQ9Y247 325 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 TRAF6Q9Y4K3 522 aa14.11□□□□□ -0.15
UBE3B-210ENST00000539599 A0A087X1B8 175 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 HEATR9A2RTY3 570 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 ZNF839A8K0R7 811 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 NT5C1B-RDH14C9J2C7 533 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 PSMD3O43242 534 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 LDB2O43679 373 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 NPHS1O60500 1241 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 TPST1O60507 370 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 GPC4O75487 556 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 BCAS2O75934 225 aaPredicted RBP14.1□□□□□ -0.15
UBE3B-210ENST00000539599 GOT2P00505 430 aaKnown RBP14.1□□□□□ -0.15
UBE3B-210ENST00000539599 ATXN1LP0C7T5 689 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms